RNA–Protein interactions for RNA: ENST00000516826.1

RNU2-56P-201, Transcript of RNA, U2 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU2-56P, Length 190 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-56P-201ENST00000516826 TTC13Q8NBP0 860 aa5.41□□□□□ -1.54
RNU2-56P-201ENST00000516826 FAM187AA6NFU0 413 aa5.4□□□□□ -1.54
RNU2-56P-201ENST00000516826 WFS1O76024 890 aa5.39□□□□□ -1.55
RNU2-56P-201ENST00000516826 INSM1Q01101 510 aaPredicted RBP5.39□□□□□ -1.55
RNU2-56P-201ENST00000516826 SWT1Q5T5J6 900 aaKnown RBP5.39□□□□□ -1.55
RNU2-56P-201ENST00000516826 ZNF697Q5TEC3 545 aa5.39□□□□□ -1.55
RNU2-56P-201ENST00000516826 LIAT1Q6ZQX7 453 aa5.39□□□□□ -1.55
RNU2-56P-201ENST00000516826 PCDHB3Q9Y5E6 796 aa5.39□□□□□ -1.55
RNU2-56P-201ENST00000516826 ARIH1Q9Y4X5 557 aaPredicted RBP5.38□□□□□ -1.55
RNU2-56P-201ENST00000516826 AVPP01185 164 aa5.37□□□□□ -1.55
RNU2-56P-201ENST00000516826 PRIM1P49642 420 aaKnown RBP5.37□□□□□ -1.55
RNU2-56P-201ENST00000516826 ST8SIA5O15466 376 aa5.36□□□□□ -1.55
RNU2-56P-201ENST00000516826 LOC100996750A0A140TA64 210 aa5.35□□□□□ -1.55
RNU2-56P-201ENST00000516826 OSBPP22059 807 aa5.35□□□□□ -1.55
RNU2-56P-201ENST00000516826 NFX1Q12986 1120 aaKnown RBP5.35□□□□□ -1.55
RNU2-56P-201ENST00000516826 BLOC1S3Q6QNY0 202 aa5.35□□□□□ -1.55
RNU2-56P-201ENST00000516826 EYA1Q99502 592 aa5.35□□□□□ -1.55
RNU2-56P-201ENST00000516826 KRTAP4-6Q9BYQ5 205 aa5.35□□□□□ -1.55
RNU2-56P-201ENST00000516826 TNFRSF10AO00220 468 aa5.34□□□□□ -1.55
RNU2-56P-201ENST00000516826 SMCPP49901 116 aaPredicted RBP5.34□□□□□ -1.55
RNU2-56P-201ENST00000516826 CTC1Q2NKJ3 1217 aa5.34□□□□□ -1.55
RNU2-56P-201ENST00000516826 PPEF1O14829 653 aaPredicted RBP5.33□□□□□ -1.56
RNU2-56P-201ENST00000516826 ACTN4O43707 911 aaKnown RBP5.33□□□□□ -1.56
RNU2-56P-201ENST00000516826 S1PR4O95977 384 aa5.33□□□□□ -1.56
RNU2-56P-201ENST00000516826 NPDC1Q9NQX5 325 aaPredicted RBP5.33□□□□□ -1.56
RNU2-56P-201ENST00000516826 PKD2L1Q9P0L9 805 aa5.33□□□□□ -1.56
RNU2-56P-201ENST00000516826 GRXCR2A6NFK2 248 aa5.32□□□□□ -1.56
RNU2-56P-201ENST00000516826 C11orf95C9JLR9 678 aaPredicted RBP5.32□□□□□ -1.56
RNU2-56P-201ENST00000516826 ADH1BP00325 375 aa5.32□□□□□ -1.56
RNU2-56P-201ENST00000516826 CDHR5Q9HBB8 845 aa5.32□□□□□ -1.56
RNU2-56P-201ENST00000516826 TOR4AQ9NXH8 423 aa5.32□□□□□ -1.56
RNU2-56P-201ENST00000516826 TLL1O43897 1013 aa5.31□□□□□ -1.56
RNU2-56P-201ENST00000516826 RPIAP49247 311 aa5.31□□□□□ -1.56
RNU2-56P-201ENST00000516826 KMT5BQ4FZB7 885 aa5.31□□□□□ -1.56
RNU2-56P-201ENST00000516826 PADI6Q6TGC4 694 aa5.31□□□□□ -1.56
RNU2-56P-201ENST00000516826 GMPR2Q9P2T1 348 aaKnown RBP5.31□□□□□ -1.56
RNU2-56P-201ENST00000516826 DACH1Q9UI36 760 aa5.31□□□□□ -1.56
RNU2-56P-201ENST00000516826 AXIN1O15169 862 aa5.3□□□□□ -1.56
RNU2-56P-201ENST00000516826 NR1I2O75469 434 aa5.3□□□□□ -1.56
RNU2-56P-201ENST00000516826 SLC6A16Q9GZN6 736 aa5.3□□□□□ -1.56
RNU2-56P-201ENST00000516826 PLA2G2CQ5R387 149 aa5.29□□□□□ -1.56
RNU2-56P-201ENST00000516826 FAM181BA6NEQ2 426 aa5.28□□□□□ -1.56
RNU2-56P-201ENST00000516826 CD2BP2O95400 341 aaKnown RBP5.28□□□□□ -1.56
RNU2-56P-201ENST00000516826 DNAJB2P25686 324 aa5.28□□□□□ -1.56
RNU2-56P-201ENST00000516826 E2F4Q16254 413 aa5.28□□□□□ -1.56
RNU2-56P-201ENST00000516826 TERTO14746 1132 aaKnown RBP5.27□□□□□ -1.57
RNU2-56P-201ENST00000516826 FOXC1Q12948 553 aa5.27□□□□□ -1.57
RNU2-56P-201ENST00000516826 CYP4X1Q8N118 509 aa5.27□□□□□ -1.57
RNU2-56P-201ENST00000516826 TMEM134Q9H6X4 195 aa5.27□□□□□ -1.57
RNU2-56P-201ENST00000516826 SCUBE3Q8IX30 993 aa5.26□□□□□ -1.57
RNU2-56P-201ENST00000516826 LCE2CQ5TA81 110 aa5.25□□□□□ -1.57
RNU2-56P-201ENST00000516826 RBM46Q8TBY0 533 aaKnown RBP5.25□□□□□ -1.57
RNU2-56P-201ENST00000516826 SENP2Q9HC62 589 aa5.25□□□□□ -1.57
RNU2-56P-201ENST00000516826 CFHP08603 1231 aa5.24□□□□□ -1.57
RNU2-56P-201ENST00000516826 TRIM47Q96LD4 638 aa5.23□□□□□ -1.57
RNU2-56P-201ENST00000516826 SPSB2Q99619 263 aa5.23□□□□□ -1.57
RNU2-56P-201ENST00000516826 ATP13A2Q9NQ11 1180 aa5.23□□□□□ -1.57
RNU2-56P-201ENST00000516826 KIFC2Q96AC6 838 aa5.22□□□□□ -1.57
RNU2-56P-201ENST00000516826 ADGRG1Q9Y653 693 aa5.22□□□□□ -1.57
RNU2-56P-201ENST00000516826 SLC10A3P09131 477 aa5.21□□□□□ -1.58
RNU2-56P-201ENST00000516826 SNRPBP14678 240 aaKnown RBP5.21□□□□□ -1.58
RNU2-56P-201ENST00000516826 TTC24A2A3L6 582 aaPredicted RBP5.2□□□□□ -1.58
RNU2-56P-201ENST00000516826 RCCD1A6NED2 376 aa5.2□□□□□ -1.58
RNU2-56P-201ENST00000516826 RSPH4AQ5TD94 716 aa5.2□□□□□ -1.58
RNU2-56P-201ENST00000516826 NPAS3Q8IXF0 933 aa5.2□□□□□ -1.58
RNU2-56P-201ENST00000516826 SNIP1Q8TAD8 396 aaKnown RBP5.2□□□□□ -1.58
RNU2-56P-201ENST00000516826 SLC16A10Q8TF71 515 aa5.2□□□□□ -1.58
RNU2-56P-201ENST00000516826 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.19□□□□□ -1.58
RNU2-56P-201ENST00000516826 WNT7AO00755 349 aa5.19□□□□□ -1.58
RNU2-56P-201ENST00000516826 SMPD1P17405 629 aa5.19□□□□□ -1.58
RNU2-56P-201ENST00000516826 LORP23490 312 aaPredicted RBP5.19□□□□□ -1.58
RNU2-56P-201ENST00000516826 PTGDRQ13258 359 aa5.19□□□□□ -1.58
RNU2-56P-201ENST00000516826 ZSCAN1Q8NBB4 408 aa5.19□□□□□ -1.58
RNU2-56P-201ENST00000516826 WDR70Q9NW82 654 aa5.19□□□□□ -1.58
RNU2-56P-201ENST00000516826 THAP11Q96EK4 314 aa5.18□□□□□ -1.58
RNU2-56P-201ENST00000516826 FCF1Q9Y324 198 aaKnown RBP5.18□□□□□ -1.58
RNU2-56P-201ENST00000516826 SALL2Q9Y467 1007 aaPredicted RBP5.18□□□□□ -1.58
RNU2-56P-201ENST00000516826 SUZ12Q15022 739 aaKnown RBP5.17□□□□□ -1.58
RNU2-56P-201ENST00000516826 ZBTB24O43167 697 aaPredicted RBP5.16□□□□□ -1.58
RNU2-56P-201ENST00000516826 FAM160A2Q8N612 972 aaPredicted RBP5.16□□□□□ -1.58
RNU2-56P-201ENST00000516826 BBXQ8WY36 941 aaPredicted RBP5.16□□□□□ -1.58
RNU2-56P-201ENST00000516826 IRF7Q92985 503 aa5.16□□□□□ -1.58
RNU2-56P-201ENST00000516826 NXF1Q9UBU9 619 aaKnown RBP5.16□□□□□ -1.58
RNU2-56P-201ENST00000516826 OATP04181 439 aa5.15□□□□□ -1.59
RNU2-56P-201ENST00000516826 DCAF8L2P0C7V8 631 aa5.15□□□□□ -1.59
RNU2-56P-201ENST00000516826 MORN1Q5T089 497 aa5.15□□□□□ -1.59
RNU2-56P-201ENST00000516826 FMNL1O95466 1100 aaPredicted RBP5.14□□□□□ -1.59
RNU2-56P-201ENST00000516826 GMPRP36959 345 aa5.14□□□□□ -1.59
RNU2-56P-201ENST00000516826 PUS10Q3MIT2 529 aaKnown RBP5.14□□□□□ -1.59
RNU2-56P-201ENST00000516826 ATP6V1AP38606 617 aa5.13□□□□□ -1.59
RNU2-56P-201ENST00000516826 REPIN1Q9BWE0 567 aaKnown RBP5.13□□□□□ -1.59
RNU2-56P-201ENST00000516826 J3QL48 77 aa5.12□□□□□ -1.59
RNU2-56P-201ENST00000516826 MSS51Q4VC12 460 aa5.12□□□□□ -1.59
RNU2-56P-201ENST00000516826 BRICD5Q6PL45 260 aa5.12□□□□□ -1.59
RNU2-56P-201ENST00000516826 PXYLP1Q8TE99 480 aa5.12□□□□□ -1.59
RNU2-56P-201ENST00000516826 MRGPRX2Q96LB1 330 aa5.12□□□□□ -1.59
RNU2-56P-201ENST00000516826 TRIM32Q13049 653 aa5.11□□□□□ -1.59
RNU2-56P-201ENST00000516826 SPRYD3Q8NCJ5 442 aa5.11□□□□□ -1.59
RNU2-56P-201ENST00000516826 HPS1Q92902 700 aa5.11□□□□□ -1.59
RNU2-56P-201ENST00000516826 H3BM21 787 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms