RNA–Protein interactions for RNA: ENST00000516584.1

RNU6-1004P-201, Transcript of RNA, U6 small nuclear 1004, pseudogene, humanhuman

BASIC

Gene RNU6-1004P, Length 111 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1004P-201ENST00000516584 FOXD4L4Q8WXT5 416 aaPredicted RBP8.3□□□□□ -1.08
RNU6-1004P-201ENST00000516584 RBM27Q9P2N5 1060 aaKnown RBP8.3□□□□□ -1.08
RNU6-1004P-201ENST00000516584 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.29□□□□□ -1.08
RNU6-1004P-201ENST00000516584 MOXD2PA6NHM9 499 aa8.29□□□□□ -1.08
RNU6-1004P-201ENST00000516584 CD46P15529 392 aa8.29□□□□□ -1.08
RNU6-1004P-201ENST00000516584 RFX1P22670 979 aa8.29□□□□□ -1.08
RNU6-1004P-201ENST00000516584 PRSS12P56730 875 aa8.29□□□□□ -1.08
RNU6-1004P-201ENST00000516584 TUSC1Q2TAM9 212 aa8.29□□□□□ -1.08
RNU6-1004P-201ENST00000516584 ZNF454Q8N9F8 522 aa8.29□□□□□ -1.08
RNU6-1004P-201ENST00000516584 ZDHHC16Q969W1 377 aa8.29□□□□□ -1.08
RNU6-1004P-201ENST00000516584 RCCD1A6NED2 376 aa8.28□□□□□ -1.08
RNU6-1004P-201ENST00000516584 NDUFV2P19404 249 aa8.28□□□□□ -1.08
RNU6-1004P-201ENST00000516584 PELP1Q8IZL8 1130 aaKnown RBP8.28□□□□□ -1.08
RNU6-1004P-201ENST00000516584 ZNF710Q8N1W2 664 aa8.28□□□□□ -1.08
RNU6-1004P-201ENST00000516584 CDCA7LQ96GN5 454 aa8.28□□□□□ -1.08
RNU6-1004P-201ENST00000516584 NUTM2BA6NNL0 878 aaPredicted RBP8.27□□□□□ -1.09
RNU6-1004P-201ENST00000516584 NUTM2EB1AL46 878 aaPredicted RBP8.27□□□□□ -1.09
RNU6-1004P-201ENST00000516584 USP17L8P0C7I0 530 aa8.27□□□□□ -1.09
RNU6-1004P-201ENST00000516584 RTL5Q5HYW3 569 aaPredicted RBP8.27□□□□□ -1.09
RNU6-1004P-201ENST00000516584 NUTM2DQ5VT03 806 aaPredicted RBP8.27□□□□□ -1.09
RNU6-1004P-201ENST00000516584 NUTM2AQ8IVF1 878 aaPredicted RBP8.27□□□□□ -1.09
RNU6-1004P-201ENST00000516584 DDX11L8A8MPP1 907 aa8.26□□□□□ -1.09
RNU6-1004P-201ENST00000516584 SOCS7O14512 581 aa8.26□□□□□ -1.09
RNU6-1004P-201ENST00000516584 LILRB3O75022 631 aa8.26□□□□□ -1.09
RNU6-1004P-201ENST00000516584 RBM25P49756 843 aaKnown RBP8.26□□□□□ -1.09
RNU6-1004P-201ENST00000516584 HDGFL1Q5TGJ6 251 aa8.26□□□□□ -1.09
RNU6-1004P-201ENST00000516584 PBXIP1Q96AQ6 731 aa8.26□□□□□ -1.09
RNU6-1004P-201ENST00000516584 ADAM33Q9BZ11 813 aa8.26□□□□□ -1.09
RNU6-1004P-201ENST00000516584 PCDHB15Q9Y5E8 787 aa8.26□□□□□ -1.09
RNU6-1004P-201ENST00000516584 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.25□□□□□ -1.09
RNU6-1004P-201ENST00000516584 KDM4FA0A1W2PPD8 638 aa8.25□□□□□ -1.09
RNU6-1004P-201ENST00000516584 POTEFA5A3E0 1075 aa8.25□□□□□ -1.09
RNU6-1004P-201ENST00000516584 SULF1Q8IWU6 871 aa8.25□□□□□ -1.09
RNU6-1004P-201ENST00000516584 CABLES1Q8TDN4 633 aa8.25□□□□□ -1.09
RNU6-1004P-201ENST00000516584 ZNF428Q96B54 188 aa8.25□□□□□ -1.09
RNU6-1004P-201ENST00000516584 FAM198AQ9UFP1 575 aa8.24□□□□□ -1.09
RNU6-1004P-201ENST00000516584 PATL2C9JE40 543 aaKnown RBP8.23□□□□□ -1.09
RNU6-1004P-201ENST00000516584 CSB-PGBD3P0DP91 1061 aa8.23□□□□□ -1.09
RNU6-1004P-201ENST00000516584 ADAMTS19Q8TE59 1207 aa8.23□□□□□ -1.09
RNU6-1004P-201ENST00000516584 EYA1Q99502 592 aa8.23□□□□□ -1.09
RNU6-1004P-201ENST00000516584 NDUFB9Q9Y6M9 179 aa8.23□□□□□ -1.09
RNU6-1004P-201ENST00000516584 SLC39A7Q92504 469 aa8.22□□□□□ -1.09
RNU6-1004P-201ENST00000516584 CARNS1A5YM72 827 aa8.21□□□□□ -1.1
RNU6-1004P-201ENST00000516584 BRD1O95696 1058 aa8.21□□□□□ -1.1
RNU6-1004P-201ENST00000516584 GJA5P36382 358 aa8.21□□□□□ -1.1
RNU6-1004P-201ENST00000516584 KCNA1Q09470 495 aa8.21□□□□□ -1.1
RNU6-1004P-201ENST00000516584 CFAP70Q5T0N1 1121 aa8.21□□□□□ -1.1
RNU6-1004P-201ENST00000516584 GJD4Q96KN9 370 aaPredicted RBP8.21□□□□□ -1.1
RNU6-1004P-201ENST00000516584 DCBLD2Q96PD2 775 aa8.21□□□□□ -1.1
RNU6-1004P-201ENST00000516584 NUDT7P0C024 238 aa8.2□□□□□ -1.1
RNU6-1004P-201ENST00000516584 WASHC4Q2M389 1173 aa8.2□□□□□ -1.1
RNU6-1004P-201ENST00000516584 NUDT18Q6ZVK8 323 aa8.2□□□□□ -1.1
RNU6-1004P-201ENST00000516584 RDH13Q8NBN7 331 aa8.2□□□□□ -1.1
RNU6-1004P-201ENST00000516584 USTQ9Y2C2 406 aa8.2□□□□□ -1.1
RNU6-1004P-201ENST00000516584 COL9A1P20849 921 aa8.19□□□□□ -1.1
RNU6-1004P-201ENST00000516584 DNAJB2P25686 324 aa8.19□□□□□ -1.1
RNU6-1004P-201ENST00000516584 VAC14Q08AM6 782 aa8.19□□□□□ -1.1
RNU6-1004P-201ENST00000516584 KHSRPQ92945 711 aaKnown RBP eCLIP8.19□□□□□ -1.1
RNU6-1004P-201ENST00000516584 ZBTB3Q9H5J0 574 aa8.19□□□□□ -1.1
RNU6-1004P-201ENST00000516584 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.19□□□□□ -1.1
RNU6-1004P-201ENST00000516584 C7P10643 843 aa8.18□□□□□ -1.1
RNU6-1004P-201ENST00000516584 PRPF38BQ5VTL8 546 aaKnown RBP8.18□□□□□ -1.1
RNU6-1004P-201ENST00000516584 PPP1R12CQ9BZL4 782 aa8.18□□□□□ -1.1
RNU6-1004P-201ENST00000516584 HMX1Q9NP08 348 aaPredicted RBP8.18□□□□□ -1.1
RNU6-1004P-201ENST00000516584 TSKSQ9UJT2 592 aa8.18□□□□□ -1.1
RNU6-1004P-201ENST00000516584 C3orf80F5H4A9 247 aa8.17□□□□□ -1.1
RNU6-1004P-201ENST00000516584 KDM4AO75164 1064 aa8.17□□□□□ -1.1
RNU6-1004P-201ENST00000516584 SRPK2P78362 688 aaKnown RBP8.17□□□□□ -1.1
RNU6-1004P-201ENST00000516584 METRNQ9UJH8 293 aa8.17□□□□□ -1.1
RNU6-1004P-201ENST00000516584 PNMA3Q9UL41 463 aa8.17□□□□□ -1.1
RNU6-1004P-201ENST00000516584 LMOD1P29536 600 aaPredicted RBP8.16□□□□□ -1.1
RNU6-1004P-201ENST00000516584 CTDSPL2Q05D32 466 aa8.16□□□□□ -1.1
RNU6-1004P-201ENST00000516584 TMEM134Q9H6X4 195 aa8.16□□□□□ -1.1
RNU6-1004P-201ENST00000516584 PALM3A6NDB9 673 aaPredicted RBP8.15□□□□□ -1.1
RNU6-1004P-201ENST00000516584 NBPF26B4DH59 902 aa8.15□□□□□ -1.1
RNU6-1004P-201ENST00000516584 GABBR2O75899 941 aa8.15□□□□□ -1.1
RNU6-1004P-201ENST00000516584 FDX1P10109 184 aa8.15□□□□□ -1.1
RNU6-1004P-201ENST00000516584 ARSIQ5FYB1 569 aa8.15□□□□□ -1.1
RNU6-1004P-201ENST00000516584 TSC1Q92574 1164 aa8.15□□□□□ -1.1
RNU6-1004P-201ENST00000516584 TATDN2Q93075 761 aa8.15□□□□□ -1.1
RNU6-1004P-201ENST00000516584 TRIM34Q9BYJ4 488 aa8.15□□□□□ -1.1
RNU6-1004P-201ENST00000516584 IVNS1ABPQ9Y6Y0 642 aa8.15□□□□□ -1.1
RNU6-1004P-201ENST00000516584 HOXA2O43364 376 aa8.14□□□□□ -1.11
RNU6-1004P-201ENST00000516584 GPR37L1O60883 481 aa8.14□□□□□ -1.11
RNU6-1004P-201ENST00000516584 GUCA2AQ02747 115 aa8.14□□□□□ -1.11
RNU6-1004P-201ENST00000516584 CDCA8Q53HL2 280 aa8.14□□□□□ -1.11
RNU6-1004P-201ENST00000516584 E9PSI1 815 aa8.13□□□□□ -1.11
RNU6-1004P-201ENST00000516584 LRRN4Q8WUT4 740 aa8.13□□□□□ -1.11
RNU6-1004P-201ENST00000516584 ALG2Q9H553 416 aa8.13□□□□□ -1.11
RNU6-1004P-201ENST00000516584 PCDHGC3Q9UN70 934 aa8.13□□□□□ -1.11
RNU6-1004P-201ENST00000516584 SMAPO00193 183 aa8.12□□□□□ -1.11
RNU6-1004P-201ENST00000516584 USP46P62068 366 aa8.12□□□□□ -1.11
RNU6-1004P-201ENST00000516584 CCDC27Q2M243 656 aa8.12□□□□□ -1.11
RNU6-1004P-201ENST00000516584 HELBQ8NG08 1087 aaPredicted RBP8.12□□□□□ -1.11
RNU6-1004P-201ENST00000516584 HLA-CQ95604 372 aa8.12□□□□□ -1.11
RNU6-1004P-201ENST00000516584 TFIP11Q9UBB9 837 aaKnown RBP8.12□□□□□ -1.11
RNU6-1004P-201ENST00000516584 PPP1R3GB7ZBB8 358 aa8.11□□□□□ -1.11
RNU6-1004P-201ENST00000516584 VRTNQ9H8Y1 702 aa8.11□□□□□ -1.11
RNU6-1004P-201ENST00000516584 TRIM6-TRIM34B2RNG4 842 aa8.1□□□□□ -1.11
RNU6-1004P-201ENST00000516584 GCGRP47871 477 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms