RNA–Protein interactions for RNA: ENST00000516546.1

RN7SKP287-201, Transcript of RNA, 7SK small nuclear pseudogene 287, humanhuman

BASIC

Gene RN7SKP287, Length 266 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP287-201ENST00000516546 MAP2K5Q13163 448 aa11.91□□□□□ -0.5
RN7SKP287-201ENST00000516546 NECTIN2Q92692 538 aa11.9□□□□□ -0.5
RN7SKP287-201ENST00000516546 PHOX2BQ99453 314 aa11.88□□□□□ -0.51
RN7SKP287-201ENST00000516546 IRF6O14896 467 aa11.87□□□□□ -0.51
RN7SKP287-201ENST00000516546 MINK1Q8N4C8 1332 aaPredicted RBP11.86□□□□□ -0.51
RN7SKP287-201ENST00000516546 ITGBL1O95965 494 aaPredicted RBP11.86□□□□□ -0.51
RN7SKP287-201ENST00000516546 APLP1P51693 650 aa11.86□□□□□ -0.51
RN7SKP287-201ENST00000516546 NLRP7Q8WX94 980 aa11.86□□□□□ -0.51
RN7SKP287-201ENST00000516546 ZC3H15Q8WU90 426 aaKnown RBP11.85□□□□□ -0.51
RN7SKP287-201ENST00000516546 IFFO2Q5TF58 517 aa11.84□□□□□ -0.51
RN7SKP287-201ENST00000516546 ZMYND10O75800 440 aa11.83□□□□□ -0.52
RN7SKP287-201ENST00000516546 CCDC102AQ96A19 550 aa11.82□□□□□ -0.52
RN7SKP287-201ENST00000516546 BCANQ96GW7 911 aa11.82□□□□□ -0.52
RN7SKP287-201ENST00000516546 DAXXQ9UER7 740 aaPredicted RBP11.82□□□□□ -0.52
RN7SKP287-201ENST00000516546 SLC10A3P09131 477 aa11.81□□□□□ -0.52
RN7SKP287-201ENST00000516546 BARGINQ6ZT62 677 aa11.81□□□□□ -0.52
RN7SKP287-201ENST00000516546 TJAP1Q5JTD0 557 aa11.8□□□□□ -0.52
RN7SKP287-201ENST00000516546 PRR14Q9BWN1 585 aa11.8□□□□□ -0.52
RN7SKP287-201ENST00000516546 KCNC4Q03721 635 aa11.79□□□□□ -0.52
RN7SKP287-201ENST00000516546 MTRQ99707 1265 aa11.79□□□□□ -0.52
RN7SKP287-201ENST00000516546 CFHP08603 1231 aa11.78□□□□□ -0.52
RN7SKP287-201ENST00000516546 KRI1Q8N9T8 703 aaKnown RBP11.78□□□□□ -0.52
RN7SKP287-201ENST00000516546 RSPH4AQ5TD94 716 aa11.77□□□□□ -0.53
RN7SKP287-201ENST00000516546 DDX11L8A8MPP1 907 aa11.76□□□□□ -0.53
RN7SKP287-201ENST00000516546 KMT5BQ4FZB7 885 aa11.76□□□□□ -0.53
RN7SKP287-201ENST00000516546 IL21Q9HBE4 155 aa11.75□□□□□ -0.53
RN7SKP287-201ENST00000516546 ACTN4O43707 911 aaKnown RBP11.74□□□□□ -0.53
RN7SKP287-201ENST00000516546 SULF1Q8IWU6 871 aa11.74□□□□□ -0.53
RN7SKP287-201ENST00000516546 RDH13Q8NBN7 331 aa11.74□□□□□ -0.53
RN7SKP287-201ENST00000516546 PCDHB3Q9Y5E6 796 aa11.74□□□□□ -0.53
RN7SKP287-201ENST00000516546 COPS2P61201 443 aa11.73□□□□□ -0.53
RN7SKP287-201ENST00000516546 MDM2Q00987 491 aaPredicted RBP11.73□□□□□ -0.53
RN7SKP287-201ENST00000516546 A0A0G2JS52 829 aa11.72□□□□□ -0.53
RN7SKP287-201ENST00000516546 ZNF516Q92618 1163 aa11.72□□□□□ -0.53
RN7SKP287-201ENST00000516546 BLOC1S3Q6QNY0 202 aa11.7□□□□□ -0.54
RN7SKP287-201ENST00000516546 CLCN1P35523 988 aa11.68□□□□□ -0.54
RN7SKP287-201ENST00000516546 GPCPD1Q9NPB8 672 aa11.68□□□□□ -0.54
RN7SKP287-201ENST00000516546 ZPR1O75312 459 aa11.67□□□□□ -0.54
RN7SKP287-201ENST00000516546 GCGRP47871 477 aa11.67□□□□□ -0.54
RN7SKP287-201ENST00000516546 TMUB1Q9BVT8 246 aa11.66□□□□□ -0.54
RN7SKP287-201ENST00000516546 CD46P15529 392 aa11.65□□□□□ -0.54
RN7SKP287-201ENST00000516546 NKX2-3Q8TAU0 364 aa11.64□□□□□ -0.55
RN7SKP287-201ENST00000516546 REPIN1Q9BWE0 567 aaKnown RBP11.64□□□□□ -0.55
RN7SKP287-201ENST00000516546 FUT2Q10981 343 aa11.63□□□□□ -0.55
RN7SKP287-201ENST00000516546 AMHR2Q16671 573 aa11.63□□□□□ -0.55
RN7SKP287-201ENST00000516546 PUS10Q3MIT2 529 aaKnown RBP11.63□□□□□ -0.55
RN7SKP287-201ENST00000516546 AK7Q96M32 723 aa11.63□□□□□ -0.55
RN7SKP287-201ENST00000516546 FAM217BQ9NTX9 383 aaPredicted RBP11.63□□□□□ -0.55
RN7SKP287-201ENST00000516546 TRIM66O15016 1216 aa11.62□□□□□ -0.55
RN7SKP287-201ENST00000516546 NR1I2O75469 434 aa11.62□□□□□ -0.55
RN7SKP287-201ENST00000516546 TTLL12Q14166 644 aaPredicted RBP11.62□□□□□ -0.55
RN7SKP287-201ENST00000516546 TLL1O43897 1013 aa11.6□□□□□ -0.55
RN7SKP287-201ENST00000516546 ATP6V1AP38606 617 aa11.6□□□□□ -0.55
RN7SKP287-201ENST00000516546 SCUBE3Q8IX30 993 aa11.6□□□□□ -0.55
RN7SKP287-201ENST00000516546 SLC24A3Q9HC58 644 aa11.6□□□□□ -0.55
RN7SKP287-201ENST00000516546 RGS20O76081 388 aa11.59□□□□□ -0.55
RN7SKP287-201ENST00000516546 MORN1Q5T089 497 aa11.59□□□□□ -0.55
RN7SKP287-201ENST00000516546 PPP1R18Q6NYC8 613 aa11.58□□□□□ -0.56
RN7SKP287-201ENST00000516546 KDM4AO75164 1064 aa11.57□□□□□ -0.56
RN7SKP287-201ENST00000516546 GIGYF2Q6Y7W6 1299 aaKnown RBP11.57□□□□□ -0.56
RN7SKP287-201ENST00000516546 SSTR3P32745 418 aaPredicted RBP11.56□□□□□ -0.56
RN7SKP287-201ENST00000516546 PARP9Q8IXQ6 854 aa11.56□□□□□ -0.56
RN7SKP287-201ENST00000516546 GRIPAP1Q4V328 841 aa11.55□□□□□ -0.56
RN7SKP287-201ENST00000516546 SLC27A5Q9Y2P5 690 aa11.55□□□□□ -0.56
RN7SKP287-201ENST00000516546 ADH1BP00325 375 aa11.54□□□□□ -0.56
RN7SKP287-201ENST00000516546 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.54□□□□□ -0.56
RN7SKP287-201ENST00000516546 GGCXP38435 758 aa11.53□□□□□ -0.56
RN7SKP287-201ENST00000516546 USP46P62068 366 aa11.52□□□□□ -0.57
RN7SKP287-201ENST00000516546 PDE4DQ08499 809 aa11.52□□□□□ -0.57
RN7SKP287-201ENST00000516546 THAP11Q96EK4 314 aa11.51□□□□□ -0.57
RN7SKP287-201ENST00000516546 SPSB2Q99619 263 aa11.51□□□□□ -0.57
RN7SKP287-201ENST00000516546 HOXA2O43364 376 aa11.5□□□□□ -0.57
RN7SKP287-201ENST00000516546 S1PR4O95977 384 aa11.5□□□□□ -0.57
RN7SKP287-201ENST00000516546 NUTM1Q86Y26 1132 aa11.5□□□□□ -0.57
RN7SKP287-201ENST00000516546 HLA-CQ95604 372 aa11.49□□□□□ -0.57
RN7SKP287-201ENST00000516546 SALL2Q9Y467 1007 aaPredicted RBP11.49□□□□□ -0.57
RN7SKP287-201ENST00000516546 FMNL1O95466 1100 aaPredicted RBP11.48□□□□□ -0.57
RN7SKP287-201ENST00000516546 SLC6A16Q9GZN6 736 aa11.48□□□□□ -0.57
RN7SKP287-201ENST00000516546 RNF223E7ERA6 249 aa11.47□□□□□ -0.57
RN7SKP287-201ENST00000516546 MS4A1P11836 297 aa11.47□□□□□ -0.57
RN7SKP287-201ENST00000516546 BRICD5Q6PL45 260 aa11.47□□□□□ -0.57
RN7SKP287-201ENST00000516546 RNF19BQ6ZMZ0 732 aa11.47□□□□□ -0.57
RN7SKP287-201ENST00000516546 BEGAINQ9BUH8 593 aa11.47□□□□□ -0.57
RN7SKP287-201ENST00000516546 Q3C1V9 767 aa11.46□□□□□ -0.57
RN7SKP287-201ENST00000516546 SPIRE2Q8WWL2 714 aa11.46□□□□□ -0.57
RN7SKP287-201ENST00000516546 GUCA2AQ02747 115 aa11.44□□□□□ -0.58
RN7SKP287-201ENST00000516546 FAM160A2Q8N612 972 aaPredicted RBP11.44□□□□□ -0.58
RN7SKP287-201ENST00000516546 PRKD2Q9BZL6 878 aa11.44□□□□□ -0.58
RN7SKP287-201ENST00000516546 PPEF1O14829 653 aaPredicted RBP11.43□□□□□ -0.58
RN7SKP287-201ENST00000516546 ANKLE1Q8NAG6 615 aa11.43□□□□□ -0.58
RN7SKP287-201ENST00000516546 MSS51Q4VC12 460 aa11.41□□□□□ -0.58
RN7SKP287-201ENST00000516546 V9GY48 417 aaPredicted RBP11.41□□□□□ -0.58
RN7SKP287-201ENST00000516546 PRDM9Q9NQV7 894 aa11.4□□□□□ -0.58
RN7SKP287-201ENST00000516546 MOXD2PA6NHM9 499 aa11.39□□□□□ -0.59
RN7SKP287-201ENST00000516546 FDX1P10109 184 aa11.39□□□□□ -0.59
RN7SKP287-201ENST00000516546 USB1Q9BQ65 265 aaKnown RBP11.39□□□□□ -0.59
RN7SKP287-201ENST00000516546 TBC1D2Q9BYX2 928 aa11.39□□□□□ -0.59
RN7SKP287-201ENST00000516546 NDUFV2P19404 249 aa11.38□□□□□ -0.59
RN7SKP287-201ENST00000516546 DIXDC1Q155Q3 683 aa11.38□□□□□ -0.59
RN7SKP287-201ENST00000516546 PCDHGC3Q9UN70 934 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms