RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 TULP1O00294 542 aaPredicted RBP7.03□□□□□ -1.28
SCARNA16.2-201ENST00000516520 GNPATO15228 680 aa7.03□□□□□ -1.28
SCARNA16.2-201ENST00000516520 KMT5BQ4FZB7 885 aa7.01□□□□□ -1.29
SCARNA16.2-201ENST00000516520 PXYLP1Q8TE99 480 aa7.01□□□□□ -1.29
SCARNA16.2-201ENST00000516520 GPR37O15354 613 aa7□□□□□ -1.29
SCARNA16.2-201ENST00000516520 FAM161AQ3B820 660 aa7□□□□□ -1.29
SCARNA16.2-201ENST00000516520 GPIHBP1Q8IV16 184 aa7□□□□□ -1.29
SCARNA16.2-201ENST00000516520 RSPH4AQ5TD94 716 aa6.99□□□□□ -1.29
SCARNA16.2-201ENST00000516520 METTL3Q86U44 580 aaKnown RBP6.99□□□□□ -1.29
SCARNA16.2-201ENST00000516520 PCDHB3Q9Y5E6 796 aa6.99□□□□□ -1.29
SCARNA16.2-201ENST00000516520 IRX2Q9BZI1 471 aaPredicted RBP6.98□□□□□ -1.29
SCARNA16.2-201ENST00000516520 ACTN4O43707 911 aaKnown RBP6.97□□□□□ -1.29
SCARNA16.2-201ENST00000516520 CFHP08603 1231 aa6.97□□□□□ -1.29
SCARNA16.2-201ENST00000516520 GGCXP38435 758 aa6.97□□□□□ -1.29
SCARNA16.2-201ENST00000516520 COPS2P61201 443 aa6.97□□□□□ -1.29
SCARNA16.2-201ENST00000516520 ZNF516Q92618 1163 aa6.96□□□□□ -1.3
SCARNA16.2-201ENST00000516520 ZPR1O75312 459 aa6.95□□□□□ -1.3
SCARNA16.2-201ENST00000516520 FECHP22830 423 aa6.95□□□□□ -1.3
SCARNA16.2-201ENST00000516520 PPP1R18Q6NYC8 613 aa6.95□□□□□ -1.3
SCARNA16.2-201ENST00000516520 SLC10A3P09131 477 aa6.94□□□□□ -1.3
SCARNA16.2-201ENST00000516520 BLOC1S3Q6QNY0 202 aa6.94□□□□□ -1.3
SCARNA16.2-201ENST00000516520 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.94□□□□□ -1.3
SCARNA16.2-201ENST00000516520 DAXXQ9UER7 740 aaPredicted RBP6.93□□□□□ -1.3
SCARNA16.2-201ENST00000516520 SULF1Q8IWU6 871 aa6.92□□□□□ -1.3
SCARNA16.2-201ENST00000516520 NKX2-3Q8TAU0 364 aa6.92□□□□□ -1.3
SCARNA16.2-201ENST00000516520 TMUB1Q9BVT8 246 aa6.92□□□□□ -1.3
SCARNA16.2-201ENST00000516520 NR1I2O75469 434 aa6.91□□□□□ -1.3
SCARNA16.2-201ENST00000516520 MAP2K5Q13163 448 aa6.91□□□□□ -1.3
SCARNA16.2-201ENST00000516520 RDH13Q8NBN7 331 aa6.91□□□□□ -1.3
SCARNA16.2-201ENST00000516520 V9GY48 417 aaPredicted RBP6.91□□□□□ -1.3
SCARNA16.2-201ENST00000516520 PRKD2Q9BZL6 878 aa6.9□□□□□ -1.3
SCARNA16.2-201ENST00000516520 DDX11L8A8MPP1 907 aa6.89□□□□□ -1.31
SCARNA16.2-201ENST00000516520 LAPTM4AQ15012 233 aa6.89□□□□□ -1.31
SCARNA16.2-201ENST00000516520 MINK1Q8N4C8 1332 aaPredicted RBP6.87□□□□□ -1.31
SCARNA16.2-201ENST00000516520 TLL1O43897 1013 aa6.87□□□□□ -1.31
SCARNA16.2-201ENST00000516520 ADH1BP00325 375 aa6.87□□□□□ -1.31
SCARNA16.2-201ENST00000516520 PHOX2BQ99453 314 aa6.87□□□□□ -1.31
SCARNA16.2-201ENST00000516520 NLRP7Q8WX94 980 aa6.86□□□□□ -1.31
SCARNA16.2-201ENST00000516520 RNF223E7ERA6 249 aa6.85□□□□□ -1.31
SCARNA16.2-201ENST00000516520 IRF6O14896 467 aa6.85□□□□□ -1.31
SCARNA16.2-201ENST00000516520 GCGRP47871 477 aa6.85□□□□□ -1.31
SCARNA16.2-201ENST00000516520 SCUBE3Q8IX30 993 aa6.85□□□□□ -1.31
SCARNA16.2-201ENST00000516520 ANKLE1Q8NAG6 615 aa6.85□□□□□ -1.31
SCARNA16.2-201ENST00000516520 S1PR4O95977 384 aa6.84□□□□□ -1.31
SCARNA16.2-201ENST00000516520 ATP6V1AP38606 617 aa6.84□□□□□ -1.31
SCARNA16.2-201ENST00000516520 PUS10Q3MIT2 529 aaKnown RBP6.84□□□□□ -1.31
SCARNA16.2-201ENST00000516520 GRIPAP1Q4V328 841 aa6.84□□□□□ -1.31
SCARNA16.2-201ENST00000516520 MORN1Q5T089 497 aa6.84□□□□□ -1.31
SCARNA16.2-201ENST00000516520 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.84□□□□□ -1.31
SCARNA16.2-201ENST00000516520 SLC6A16Q9GZN6 736 aa6.84□□□□□ -1.31
SCARNA16.2-201ENST00000516520 FUT2Q10981 343 aa6.83□□□□□ -1.32
SCARNA16.2-201ENST00000516520 LMOD2Q6P5Q4 547 aa6.83□□□□□ -1.32
SCARNA16.2-201ENST00000516520 Q6ZNB5 142 aa6.83□□□□□ -1.32
SCARNA16.2-201ENST00000516520 CCDC102AQ96A19 550 aa6.83□□□□□ -1.32
SCARNA16.2-201ENST00000516520 SPSB2Q99619 263 aa6.83□□□□□ -1.32
SCARNA16.2-201ENST00000516520 NRG2O14511 850 aaPredicted RBP6.82□□□□□ -1.32
SCARNA16.2-201ENST00000516520 GFRA3O60609 400 aa6.82□□□□□ -1.32
SCARNA16.2-201ENST00000516520 FMNL1O95466 1100 aaPredicted RBP6.81□□□□□ -1.32
SCARNA16.2-201ENST00000516520 CD46P15529 392 aa6.81□□□□□ -1.32
SCARNA16.2-201ENST00000516520 SLC19A1P41440 591 aa6.81□□□□□ -1.32
SCARNA16.2-201ENST00000516520 CLCN1P35523 988 aa6.8□□□□□ -1.32
SCARNA16.2-201ENST00000516520 MDM2Q00987 491 aaPredicted RBP6.8□□□□□ -1.32
SCARNA16.2-201ENST00000516520 SALL2Q9Y467 1007 aaPredicted RBP6.8□□□□□ -1.32
SCARNA16.2-201ENST00000516520 USP46P62068 366 aa6.79□□□□□ -1.32
SCARNA16.2-201ENST00000516520 Q3C1V9 767 aa6.79□□□□□ -1.32
SCARNA16.2-201ENST00000516520 THAP11Q96EK4 314 aa6.79□□□□□ -1.32
SCARNA16.2-201ENST00000516520 GPCPD1Q9NPB8 672 aa6.79□□□□□ -1.32
SCARNA16.2-201ENST00000516520 SLC27A5Q9Y2P5 690 aa6.79□□□□□ -1.32
SCARNA16.2-201ENST00000516520 PPEF1O14829 653 aaPredicted RBP6.78□□□□□ -1.32
SCARNA16.2-201ENST00000516520 SPRYD7Q5W111 196 aa6.78□□□□□ -1.32
SCARNA16.2-201ENST00000516520 KRI1Q8N9T8 703 aaKnown RBP6.78□□□□□ -1.32
SCARNA16.2-201ENST00000516520 PDZRN3Q9UPQ7 1066 aa6.78□□□□□ -1.32
SCARNA16.2-201ENST00000516520 KDM4AO75164 1064 aa6.77□□□□□ -1.33
SCARNA16.2-201ENST00000516520 ZNF598Q86UK7 904 aaKnown RBP6.77□□□□□ -1.33
SCARNA16.2-201ENST00000516520 MSS51Q4VC12 460 aa6.76□□□□□ -1.33
SCARNA16.2-201ENST00000516520 BRICD5Q6PL45 260 aa6.76□□□□□ -1.33
SCARNA16.2-201ENST00000516520 BARGINQ6ZT62 677 aa6.76□□□□□ -1.33
SCARNA16.2-201ENST00000516520 ZMYND10O75800 440 aa6.75□□□□□ -1.33
SCARNA16.2-201ENST00000516520 LIAT1Q6ZQX7 453 aa6.75□□□□□ -1.33
SCARNA16.2-201ENST00000516520 EMID1Q96A84 441 aaPredicted RBP6.75□□□□□ -1.33
SCARNA16.2-201ENST00000516520 FAM217BQ9NTX9 383 aaPredicted RBP6.75□□□□□ -1.33
SCARNA16.2-201ENST00000516520 RPIAP49247 311 aa6.74□□□□□ -1.33
SCARNA16.2-201ENST00000516520 PRR20EP86478 221 aa6.74□□□□□ -1.33
SCARNA16.2-201ENST00000516520 PRR20CP86479 221 aa6.74□□□□□ -1.33
SCARNA16.2-201ENST00000516520 PRR20DP86480 221 aa6.74□□□□□ -1.33
SCARNA16.2-201ENST00000516520 PRR20BP86481 221 aa6.74□□□□□ -1.33
SCARNA16.2-201ENST00000516520 PRR20AP86496 221 aa6.74□□□□□ -1.33
SCARNA16.2-201ENST00000516520 ZNF697Q5TEC3 545 aa6.74□□□□□ -1.33
SCARNA16.2-201ENST00000516520 TRAF7Q6Q0C0 670 aa6.74□□□□□ -1.33
SCARNA16.2-201ENST00000516520 RNF19BQ6ZMZ0 732 aa6.74□□□□□ -1.33
SCARNA16.2-201ENST00000516520 FAM160A2Q8N612 972 aaPredicted RBP6.74□□□□□ -1.33
SCARNA16.2-201ENST00000516520 ZC3H15Q8WU90 426 aaKnown RBP6.74□□□□□ -1.33
SCARNA16.2-201ENST00000516520 HOXA2O43364 376 aa6.73□□□□□ -1.33
SCARNA16.2-201ENST00000516520 NUTM1Q86Y26 1132 aa6.73□□□□□ -1.33
SCARNA16.2-201ENST00000516520 FCF1Q9Y324 198 aaKnown RBP6.73□□□□□ -1.33
SCARNA16.2-201ENST00000516520 TTLL12Q14166 644 aaPredicted RBP6.72□□□□□ -1.33
SCARNA16.2-201ENST00000516520 AMHR2Q16671 573 aa6.72□□□□□ -1.33
SCARNA16.2-201ENST00000516520 PLA2G2CQ5R387 149 aa6.72□□□□□ -1.33
SCARNA16.2-201ENST00000516520 TRIM67Q6ZTA4 783 aa6.72□□□□□ -1.33
SCARNA16.2-201ENST00000516520 USB1Q9BQ65 265 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms