RNA–Protein interactions for RNA: ENST00000515731.1

SDHC-209, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 3

Gene SDHC, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-209ENST00000515731 NKTRP30414 1462 aaKnown RBP24.88■■□□□ 1.57
SDHC-209ENST00000515731 ZFYVE9O95405 1425 aa24.87■■□□□ 1.57
SDHC-209ENST00000515731 SLC26A8Q96RN1 970 aa24.85■■□□□ 1.57
SDHC-209ENST00000515731 PHF23Q9BUL5 403 aaPredicted RBP24.84■■□□□ 1.57
SDHC-209ENST00000515731 ROCK1Q13464 1354 aa24.83■■□□□ 1.57
SDHC-209ENST00000515731 E9PCH4 1651 aa24.83■■□□□ 1.57
SDHC-209ENST00000515731 PLEKHG1Q9ULL1 1385 aa24.82■■□□□ 1.56
SDHC-209ENST00000515731 ROBO1Q9Y6N7 1651 aa24.82■■□□□ 1.56
SDHC-209ENST00000515731 PROSER2Q86WR7 435 aaPredicted RBP24.81■■□□□ 1.56
SDHC-209ENST00000515731 IQGAP3Q86VI3 1631 aa24.81■■□□□ 1.56
SDHC-209ENST00000515731 HDGFP51858 240 aaKnown RBP24.8■■□□□ 1.56
SDHC-209ENST00000515731 RIMS2Q9UQ26 1411 aa24.78■■□□□ 1.56
SDHC-209ENST00000515731 SENP3Q9H4L4 574 aaPredicted RBP24.77■■□□□ 1.56
SDHC-209ENST00000515731 TBX22Q9Y458 520 aa24.75■■□□□ 1.55
SDHC-209ENST00000515731 NCOA3Q9Y6Q9 1424 aa24.74■■□□□ 1.55
SDHC-209ENST00000515731 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.73■■□□□ 1.55
SDHC-209ENST00000515731 RGS17Q9UGC6 210 aaPredicted RBP24.73■■□□□ 1.55
SDHC-209ENST00000515731 DIP2AQ14689 1571 aa24.72■■□□□ 1.55
SDHC-209ENST00000515731 MSH6P52701 1360 aa24.72■■□□□ 1.55
SDHC-209ENST00000515731 RBM33Q96EV2 1170 aaKnown RBP24.71■■□□□ 1.55
SDHC-209ENST00000515731 BCANQ96GW7 911 aa24.71■■□□□ 1.55
SDHC-209ENST00000515731 PIK3R4Q99570 1358 aa24.69■■□□□ 1.54
SDHC-209ENST00000515731 ADAMTS13Q76LX8 1427 aa24.69■■□□□ 1.54
SDHC-209ENST00000515731 PPP1R15AO75807 674 aaPredicted RBP24.68■■□□□ 1.54
SDHC-209ENST00000515731 SLAIN2Q9P270 581 aa24.68■■□□□ 1.54
SDHC-209ENST00000515731 PHLPP1O60346 1717 aa24.68■■□□□ 1.54
SDHC-209ENST00000515731 NUP155O75694 1391 aa24.64■■□□□ 1.53
SDHC-209ENST00000515731 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.64■■□□□ 1.53
SDHC-209ENST00000515731 SPHKAPQ2M3C7 1700 aa24.63■■□□□ 1.53
SDHC-209ENST00000515731 CHGAP10645 457 aaKnown RBP24.62■■□□□ 1.53
SDHC-209ENST00000515731 COL16A1Q07092 1604 aaPredicted RBP24.61■■□□□ 1.53
SDHC-209ENST00000515731 TRPM2O94759 1503 aa24.61■■□□□ 1.53
SDHC-209ENST00000515731 JCADQ9P266 1359 aa24.58■■□□□ 1.53
SDHC-209ENST00000515731 NRXN3Q9Y4C0 1643 aa24.58■■□□□ 1.53
SDHC-209ENST00000515731 C19orf44Q9H6X5 657 aa24.57■■□□□ 1.52
SDHC-209ENST00000515731 SETBP1Q9Y6X0 1596 aa24.56■■□□□ 1.52
SDHC-209ENST00000515731 AHDC1Q5TGY3 1603 aaPredicted RBP24.55■■□□□ 1.52
SDHC-209ENST00000515731 NUTM2DQ5VT03 806 aaPredicted RBP24.55■■□□□ 1.52
SDHC-209ENST00000515731 POTEAQ6S8J7 498 aa24.55■■□□□ 1.52
SDHC-209ENST00000515731 CADPS2Q86UW7 1296 aa24.55■■□□□ 1.52
SDHC-209ENST00000515731 XRN1Q8IZH2 1706 aaKnown RBP24.55■■□□□ 1.52
SDHC-209ENST00000515731 PTPRUQ92729 1446 aa24.54■■□□□ 1.52
SDHC-209ENST00000515731 AMOTL2Q9Y2J4 779 aa24.52■■□□□ 1.52
SDHC-209ENST00000515731 SHPRHQ149N8 1683 aa24.52■■□□□ 1.52
SDHC-209ENST00000515731 ITGAEP38570 1179 aa24.51■■□□□ 1.51
SDHC-209ENST00000515731 DCCP43146 1447 aa24.5■■□□□ 1.51
SDHC-209ENST00000515731 ATF3P18847 181 aa24.49■■□□□ 1.51
SDHC-209ENST00000515731 KIF1BO60333 1816 aa24.48■■□□□ 1.51
SDHC-209ENST00000515731 SPATA31A6Q5VVP1 1343 aa24.48■■□□□ 1.51
SDHC-209ENST00000515731 C14orf37Q86TY3 774 aa24.48■■□□□ 1.51
SDHC-209ENST00000515731 CLTCL1P53675 1640 aa24.47■■□□□ 1.51
SDHC-209ENST00000515731 RRBP1Q9P2E9 1410 aaKnown RBP24.47■■□□□ 1.51
SDHC-209ENST00000515731 NEXMIFQ5QGS0 1516 aa24.45■■□□□ 1.51
SDHC-209ENST00000515731 LRP6O75581 1613 aa24.43■■□□□ 1.5
SDHC-209ENST00000515731 NAIPQ13075 1403 aa24.43■■□□□ 1.5
SDHC-209ENST00000515731 PPARGC1BQ86YN6 1023 aaKnown RBP24.42■■□□□ 1.5
SDHC-209ENST00000515731 NHSL1Q5SYE7 1610 aa24.42■■□□□ 1.5
SDHC-209ENST00000515731 BRINP3Q76B58 766 aa24.41■■□□□ 1.5
SDHC-209ENST00000515731 METP08581 1390 aa24.41■■□□□ 1.5
SDHC-209ENST00000515731 ZNF326Q5BKZ1 582 aaKnown RBP24.4■■□□□ 1.5
SDHC-209ENST00000515731 MST1RQ04912 1400 aa24.39■■□□□ 1.5
SDHC-209ENST00000515731 ASXL1Q8IXJ9 1541 aa24.38■■□□□ 1.49
SDHC-209ENST00000515731 SETD1AO15047 1707 aaKnown RBP24.38■■□□□ 1.49
SDHC-209ENST00000515731 SETD5Q9C0A6 1442 aa24.36■■□□□ 1.49
SDHC-209ENST00000515731 NALCNQ8IZF0 1738 aa24.36■■□□□ 1.49
SDHC-209ENST00000515731 ADGRL3Q9HAR2 1447 aa24.35■■□□□ 1.49
SDHC-209ENST00000515731 ZNF772Q68DY9 489 aaPredicted RBP24.34■■□□□ 1.49
SDHC-209ENST00000515731 HFM1A2PYH4 1435 aa24.32■■□□□ 1.48
SDHC-209ENST00000515731 PRAG1Q86YV5 1406 aa24.32■■□□□ 1.48
SDHC-209ENST00000515731 LAMC1P11047 1609 aa24.32■■□□□ 1.48
SDHC-209ENST00000515731 PPLO60437 1756 aa24.3■■□□□ 1.48
SDHC-209ENST00000515731 PTCH1Q13635 1447 aa24.29■■□□□ 1.48
SDHC-209ENST00000515731 VGFO15240 615 aaPredicted RBP24.29■■□□□ 1.48
SDHC-209ENST00000515731 MEX3CQ5U5Q3 659 aaKnown RBP24.29■■□□□ 1.48
SDHC-209ENST00000515731 RPGRIP1LQ68CZ1 1315 aa24.28■■□□□ 1.48
SDHC-209ENST00000515731 LRRC59Q96AG4 307 aaKnown RBP24.27■■□□□ 1.48
SDHC-209ENST00000515731 CDK12Q9NYV4 1490 aaPredicted RBP24.25■■□□□ 1.47
SDHC-209ENST00000515731 C1orf167Q5SNV9 1468 aa24.23■■□□□ 1.47
SDHC-209ENST00000515731 TRIM52Q96A61 297 aa24.21■■□□□ 1.47
SDHC-209ENST00000515731 PNPLA6Q8IY17 1366 aa24.2■■□□□ 1.46
SDHC-209ENST00000515731 ROBO2Q9HCK4 1378 aa24.2■■□□□ 1.46
SDHC-209ENST00000515731 SLC4A1APQ9BWU0 796 aaKnown RBP24.2■■□□□ 1.46
SDHC-209ENST00000515731 RXRBP28702 533 aa24.19■■□□□ 1.46
SDHC-209ENST00000515731 NUTM2BA6NNL0 878 aaPredicted RBP24.18■■□□□ 1.46
SDHC-209ENST00000515731 NUTM2EB1AL46 878 aaPredicted RBP24.18■■□□□ 1.46
SDHC-209ENST00000515731 NUTM2AQ8IVF1 878 aaPredicted RBP24.18■■□□□ 1.46
SDHC-209ENST00000515731 AFF2P51816 1311 aa24.17■■□□□ 1.46
SDHC-209ENST00000515731 IFT172Q9UG01 1749 aa24.16■■□□□ 1.46
SDHC-209ENST00000515731 DDX17Q92841 729 aaKnown RBP24.16■■□□□ 1.46
SDHC-209ENST00000515731 UPF1Q92900 1129 aaKnown RBP eCLIP24.16■■□□□ 1.46
SDHC-209ENST00000515731 SOS2Q07890 1332 aaPredicted RBP24.15■■□□□ 1.46
SDHC-209ENST00000515731 COL22A1Q8NFW1 1626 aaPredicted RBP24.12■■□□□ 1.45
SDHC-209ENST00000515731 CDC42BPGQ6DT37 1551 aa24.12■■□□□ 1.45
SDHC-209ENST00000515731 ORAI2Q96SN7 254 aa24.11■■□□□ 1.45
SDHC-209ENST00000515731 SPATA31E1Q6ZUB1 1445 aa24.1■■□□□ 1.45
SDHC-209ENST00000515731 KNDC1Q76NI1 1749 aa24.09■■□□□ 1.45
SDHC-209ENST00000515731 TECPR2O15040 1411 aa24.08■■□□□ 1.44
SDHC-209ENST00000515731 RBM6P78332 1123 aaKnown RBP24.07■■□□□ 1.44
SDHC-209ENST00000515731 C8orf37Q96NL8 207 aa24.07■■□□□ 1.44
SDHC-209ENST00000515731 QTRT2Q9H974 415 aaKnown RBP24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms