RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 XIRP1Q702N8 1843 aaKnown RBP20.38■□□□□ 0.85
PFDN1-206ENST00000514611 MYO5BQ9ULV0 1848 aa20.37■□□□□ 0.85
PFDN1-206ENST00000514611 RIMS2Q9UQ26 1411 aa20.36■□□□□ 0.85
PFDN1-206ENST00000514611 RRBP1Q9P2E9 1410 aaKnown RBP20.36■□□□□ 0.85
PFDN1-206ENST00000514611 NWD1Q149M9 1564 aa20.35■□□□□ 0.85
PFDN1-206ENST00000514611 MED1Q15648 1581 aaPredicted RBP20.35■□□□□ 0.85
PFDN1-206ENST00000514611 TMEM94Q12767 1356 aa20.34■□□□□ 0.85
PFDN1-206ENST00000514611 PLEKHG1Q9ULL1 1385 aa20.34■□□□□ 0.85
PFDN1-206ENST00000514611 CHGAP10645 457 aaKnown RBP20.33■□□□□ 0.85
PFDN1-206ENST00000514611 KCNA6P17658 529 aa20.33■□□□□ 0.85
PFDN1-206ENST00000514611 RBM33Q96EV2 1170 aaKnown RBP20.33■□□□□ 0.85
PFDN1-206ENST00000514611 BCANQ96GW7 911 aa20.33■□□□□ 0.85
PFDN1-206ENST00000514611 PPP1R15AO75807 674 aaPredicted RBP20.32■□□□□ 0.84
PFDN1-206ENST00000514611 NKTRP30414 1462 aaKnown RBP20.31■□□□□ 0.84
PFDN1-206ENST00000514611 NUTM2DQ5VT03 806 aaPredicted RBP20.29■□□□□ 0.84
PFDN1-206ENST00000514611 SOCS7O14512 581 aa20.27■□□□□ 0.84
PFDN1-206ENST00000514611 PROSER2Q86WR7 435 aaPredicted RBP20.27■□□□□ 0.84
PFDN1-206ENST00000514611 NAIPQ13075 1403 aa20.27■□□□□ 0.83
PFDN1-206ENST00000514611 ADAMTS13Q76LX8 1427 aa20.26■□□□□ 0.83
PFDN1-206ENST00000514611 HDGFP51858 240 aaKnown RBP20.25■□□□□ 0.83
PFDN1-206ENST00000514611 SPHKAPQ2M3C7 1700 aa20.24■□□□□ 0.83
PFDN1-206ENST00000514611 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.24■□□□□ 0.83
PFDN1-206ENST00000514611 DIP2AQ14689 1571 aa20.22■□□□□ 0.83
PFDN1-206ENST00000514611 FAM135BQ49AJ0 1406 aa20.22■□□□□ 0.83
PFDN1-206ENST00000514611 CHD2O14647 1828 aaKnown RBP20.22■□□□□ 0.83
PFDN1-206ENST00000514611 TBX22Q9Y458 520 aa20.21■□□□□ 0.83
PFDN1-206ENST00000514611 MSH6P52701 1360 aa20.21■□□□□ 0.83
PFDN1-206ENST00000514611 ROBO1Q9Y6N7 1651 aa20.2■□□□□ 0.82
PFDN1-206ENST00000514611 CLTCL1P53675 1640 aa20.19■□□□□ 0.82
PFDN1-206ENST00000514611 HFM1A2PYH4 1435 aa20.19■□□□□ 0.82
PFDN1-206ENST00000514611 TRPM2O94759 1503 aa20.18■□□□□ 0.82
PFDN1-206ENST00000514611 NRXN3Q9Y4C0 1643 aa20.17■□□□□ 0.82
PFDN1-206ENST00000514611 PHF23Q9BUL5 403 aaPredicted RBP20.16■□□□□ 0.82
PFDN1-206ENST00000514611 PTPRUQ92729 1446 aa20.16■□□□□ 0.82
PFDN1-206ENST00000514611 PIK3R4Q99570 1358 aa20.15■□□□□ 0.82
PFDN1-206ENST00000514611 SETBP1Q9Y6X0 1596 aa20.14■□□□□ 0.81
PFDN1-206ENST00000514611 ZNF326Q5BKZ1 582 aaKnown RBP20.14■□□□□ 0.81
PFDN1-206ENST00000514611 NEXMIFQ5QGS0 1516 aa20.13■□□□□ 0.81
PFDN1-206ENST00000514611 NCOA3Q9Y6Q9 1424 aa20.11■□□□□ 0.81
PFDN1-206ENST00000514611 C14orf37Q86TY3 774 aa20.11■□□□□ 0.81
PFDN1-206ENST00000514611 TRIM52Q96A61 297 aa20.11■□□□□ 0.81
PFDN1-206ENST00000514611 SLAIN2Q9P270 581 aa20.11■□□□□ 0.81
PFDN1-206ENST00000514611 AMOTL2Q9Y2J4 779 aa20.1■□□□□ 0.81
PFDN1-206ENST00000514611 XRN1Q8IZH2 1706 aaKnown RBP20.1■□□□□ 0.81
PFDN1-206ENST00000514611 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.08■□□□□ 0.81
PFDN1-206ENST00000514611 METP08581 1390 aa20.08■□□□□ 0.8
PFDN1-206ENST00000514611 PHLPP1O60346 1717 aa20.06■□□□□ 0.8
PFDN1-206ENST00000514611 SLC4A1APQ9BWU0 796 aaKnown RBP20.06■□□□□ 0.8
PFDN1-206ENST00000514611 KIF1BO60333 1816 aa20.04■□□□□ 0.8
PFDN1-206ENST00000514611 C19orf44Q9H6X5 657 aa20.04■□□□□ 0.8
PFDN1-206ENST00000514611 RGS17Q9UGC6 210 aaPredicted RBP20.04■□□□□ 0.8
PFDN1-206ENST00000514611 COL16A1Q07092 1604 aaPredicted RBP20.03■□□□□ 0.8
PFDN1-206ENST00000514611 CADPS2Q86UW7 1296 aa20.03■□□□□ 0.8
PFDN1-206ENST00000514611 ATF3P18847 181 aa20.02■□□□□ 0.8
PFDN1-206ENST00000514611 FOXD1Q16676 465 aa20.02■□□□□ 0.8
PFDN1-206ENST00000514611 DCCP43146 1447 aa20■□□□□ 0.79
PFDN1-206ENST00000514611 AHDC1Q5TGY3 1603 aaPredicted RBP19.99■□□□□ 0.79
PFDN1-206ENST00000514611 JCADQ9P266 1359 aa19.99■□□□□ 0.79
PFDN1-206ENST00000514611 SETD1AO15047 1707 aaKnown RBP19.98■□□□□ 0.79
PFDN1-206ENST00000514611 MST1RQ04912 1400 aa19.96■□□□□ 0.79
PFDN1-206ENST00000514611 ADGRL3Q9HAR2 1447 aa19.96■□□□□ 0.79
PFDN1-206ENST00000514611 BRINP3Q76B58 766 aa19.96■□□□□ 0.79
PFDN1-206ENST00000514611 ASXL1Q8IXJ9 1541 aa19.96■□□□□ 0.79
PFDN1-206ENST00000514611 NALCNQ8IZF0 1738 aa19.96■□□□□ 0.79
PFDN1-206ENST00000514611 PPLO60437 1756 aa19.94■□□□□ 0.78
PFDN1-206ENST00000514611 VGFO15240 615 aaPredicted RBP19.94■□□□□ 0.78
PFDN1-206ENST00000514611 LRP6O75581 1613 aa19.94■□□□□ 0.78
PFDN1-206ENST00000514611 PTCH1Q13635 1447 aa19.93■□□□□ 0.78
PFDN1-206ENST00000514611 POTEAQ6S8J7 498 aa19.93■□□□□ 0.78
PFDN1-206ENST00000514611 RPGRIP1LQ68CZ1 1315 aa19.93■□□□□ 0.78
PFDN1-206ENST00000514611 CCDC144AA2RUR9 1427 aa19.93■□□□□ 0.78
PFDN1-206ENST00000514611 ROBO2Q9HCK4 1378 aa19.92■□□□□ 0.78
PFDN1-206ENST00000514611 MPHOSPH9Q99550 1183 aa19.91■□□□□ 0.78
PFDN1-206ENST00000514611 SPATA31E1Q6ZUB1 1445 aa19.9■□□□□ 0.78
PFDN1-206ENST00000514611 SHPRHQ149N8 1683 aa19.89■□□□□ 0.77
PFDN1-206ENST00000514611 PRAG1Q86YV5 1406 aa19.89■□□□□ 0.77
PFDN1-206ENST00000514611 NHSL1Q5SYE7 1610 aa19.88■□□□□ 0.77
PFDN1-206ENST00000514611 SPATA31A6Q5VVP1 1343 aa19.88■□□□□ 0.77
PFDN1-206ENST00000514611 ADGRF5Q8IZF2 1346 aa19.87■□□□□ 0.77
PFDN1-206ENST00000514611 RGL3Q3MIN7 710 aa19.86■□□□□ 0.77
PFDN1-206ENST00000514611 DDX17Q92841 729 aaKnown RBP19.86■□□□□ 0.77
PFDN1-206ENST00000514611 SETD5Q9C0A6 1442 aa19.85■□□□□ 0.77
PFDN1-206ENST00000514611 C1orf167Q5SNV9 1468 aa19.85■□□□□ 0.77
PFDN1-206ENST00000514611 IFT172Q9UG01 1749 aa19.85■□□□□ 0.77
PFDN1-206ENST00000514611 MEX3CQ5U5Q3 659 aaKnown RBP19.83■□□□□ 0.77
PFDN1-206ENST00000514611 RAB3GAP2Q9H2M9 1393 aa19.82■□□□□ 0.76
PFDN1-206ENST00000514611 PIK3C2GO75747 1445 aa19.81■□□□□ 0.76
PFDN1-206ENST00000514611 ANKRD30BQ9BXX2 1392 aa19.81■□□□□ 0.76
PFDN1-206ENST00000514611 NUTM2BA6NNL0 878 aaPredicted RBP19.8■□□□□ 0.76
PFDN1-206ENST00000514611 NUTM2EB1AL46 878 aaPredicted RBP19.8■□□□□ 0.76
PFDN1-206ENST00000514611 NUTM2AQ8IVF1 878 aaPredicted RBP19.8■□□□□ 0.76
PFDN1-206ENST00000514611 ORAI2Q96SN7 254 aa19.78■□□□□ 0.76
PFDN1-206ENST00000514611 PNPLA6Q8IY17 1366 aa19.78■□□□□ 0.76
PFDN1-206ENST00000514611 TECPR2O15040 1411 aa19.77■□□□□ 0.76
PFDN1-206ENST00000514611 CDC42BPGQ6DT37 1551 aa19.77■□□□□ 0.76
PFDN1-206ENST00000514611 LRPPRCP42704 1394 aaKnown RBP19.76■□□□□ 0.75
PFDN1-206ENST00000514611 LRRC59Q96AG4 307 aaKnown RBP19.76■□□□□ 0.75
PFDN1-206ENST00000514611 STK26Q9P289 416 aa19.76■□□□□ 0.75
PFDN1-206ENST00000514611 LAMC1P11047 1609 aa19.76■□□□□ 0.75
PFDN1-206ENST00000514611 PLEKHH1Q9ULM0 1364 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms