RNA–Protein interactions for RNA: ENST00000514418.1

SEC24D-213, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 3

Gene SEC24D, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-213ENST00000514418 PXYLP1Q8TE99 480 aa8.89□□□□□ -0.99
SEC24D-213ENST00000514418 HDGFP51858 240 aaKnown RBP8.88□□□□□ -0.99
SEC24D-213ENST00000514418 TJAP1Q5JTD0 557 aa8.88□□□□□ -0.99
SEC24D-213ENST00000514418 SLF2Q8IX21 1173 aa8.88□□□□□ -0.99
SEC24D-213ENST00000514418 OATP04181 439 aa8.87□□□□□ -0.99
SEC24D-213ENST00000514418 APLP1P51693 650 aa8.87□□□□□ -0.99
SEC24D-213ENST00000514418 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.86□□□□□ -0.99
SEC24D-213ENST00000514418 ZMYND10O75800 440 aa8.86□□□□□ -0.99
SEC24D-213ENST00000514418 METTL3Q86U44 580 aaKnown RBP8.86□□□□□ -0.99
SEC24D-213ENST00000514418 KCNC4Q03721 635 aa8.85□□□□□ -0.99
SEC24D-213ENST00000514418 NECTIN2Q92692 538 aa8.85□□□□□ -0.99
SEC24D-213ENST00000514418 RGS20O76081 388 aa8.84□□□□□ -0.99
SEC24D-213ENST00000514418 MTRQ99707 1265 aa8.83□□□□□ -1
SEC24D-213ENST00000514418 SLC24A3Q9HC58 644 aa8.83□□□□□ -1
SEC24D-213ENST00000514418 BARGINQ6ZT62 677 aa8.82□□□□□ -1
SEC24D-213ENST00000514418 RNF40O75150 1001 aa8.81□□□□□ -1
SEC24D-213ENST00000514418 SLC10A3P09131 477 aa8.81□□□□□ -1
SEC24D-213ENST00000514418 PHOX2BQ99453 314 aa8.81□□□□□ -1
SEC24D-213ENST00000514418 IL21Q9HBE4 155 aa8.81□□□□□ -1
SEC24D-213ENST00000514418 SLC4A3P48751 1232 aa8.79□□□□□ -1
SEC24D-213ENST00000514418 ZNF516Q92618 1163 aa8.79□□□□□ -1
SEC24D-213ENST00000514418 MAP2K5Q13163 448 aa8.78□□□□□ -1
SEC24D-213ENST00000514418 PRR14Q9BWN1 585 aa8.78□□□□□ -1
SEC24D-213ENST00000514418 ACTN4O43707 911 aaKnown RBP8.77□□□□□ -1.01
SEC24D-213ENST00000514418 AK7Q96M32 723 aa8.77□□□□□ -1.01
SEC24D-213ENST00000514418 DAXXQ9UER7 740 aaPredicted RBP8.77□□□□□ -1.01
SEC24D-213ENST00000514418 MINK1Q8N4C8 1332 aaPredicted RBP8.77□□□□□ -1.01
SEC24D-213ENST00000514418 IRF6O14896 467 aa8.74□□□□□ -1.01
SEC24D-213ENST00000514418 CFHP08603 1231 aa8.74□□□□□ -1.01
SEC24D-213ENST00000514418 NLRP7Q8WX94 980 aa8.74□□□□□ -1.01
SEC24D-213ENST00000514418 ZPR1O75312 459 aa8.73□□□□□ -1.01
SEC24D-213ENST00000514418 COPS2P61201 443 aa8.73□□□□□ -1.01
SEC24D-213ENST00000514418 KMT5BQ4FZB7 885 aa8.73□□□□□ -1.01
SEC24D-213ENST00000514418 NKX2-3Q8TAU0 364 aa8.73□□□□□ -1.01
SEC24D-213ENST00000514418 CCDC102AQ96A19 550 aa8.73□□□□□ -1.01
SEC24D-213ENST00000514418 PCDHB3Q9Y5E6 796 aa8.73□□□□□ -1.01
SEC24D-213ENST00000514418 BLOC1S3Q6QNY0 202 aa8.72□□□□□ -1.01
SEC24D-213ENST00000514418 NEUROD2Q15784 382 aa8.7□□□□□ -1.02
SEC24D-213ENST00000514418 PPP1R18Q6NYC8 613 aa8.7□□□□□ -1.02
SEC24D-213ENST00000514418 TRIM66O15016 1216 aa8.69□□□□□ -1.02
SEC24D-213ENST00000514418 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.68□□□□□ -1.02
SEC24D-213ENST00000514418 GCGRP47871 477 aa8.67□□□□□ -1.02
SEC24D-213ENST00000514418 RSPH4AQ5TD94 716 aa8.67□□□□□ -1.02
SEC24D-213ENST00000514418 TMUB1Q9BVT8 246 aa8.67□□□□□ -1.02
SEC24D-213ENST00000514418 DDX11L8A8MPP1 907 aa8.66□□□□□ -1.02
SEC24D-213ENST00000514418 PDE4DQ08499 809 aa8.66□□□□□ -1.02
SEC24D-213ENST00000514418 TTLL12Q14166 644 aaPredicted RBP8.66□□□□□ -1.02
SEC24D-213ENST00000514418 SULF1Q8IWU6 871 aa8.66□□□□□ -1.02
SEC24D-213ENST00000514418 TLL1O43897 1013 aa8.65□□□□□ -1.02
SEC24D-213ENST00000514418 CD46P15529 392 aa8.65□□□□□ -1.02
SEC24D-213ENST00000514418 NR1I2O75469 434 aa8.64□□□□□ -1.03
SEC24D-213ENST00000514418 MORN1Q5T089 497 aa8.64□□□□□ -1.03
SEC24D-213ENST00000514418 SCUBE3Q8IX30 993 aa8.64□□□□□ -1.03
SEC24D-213ENST00000514418 RDH13Q8NBN7 331 aa8.64□□□□□ -1.03
SEC24D-213ENST00000514418 BRPF1P55201 1214 aaPredicted RBP8.63□□□□□ -1.03
SEC24D-213ENST00000514418 FUT2Q10981 343 aa8.63□□□□□ -1.03
SEC24D-213ENST00000514418 PUS10Q3MIT2 529 aaKnown RBP8.63□□□□□ -1.03
SEC24D-213ENST00000514418 MDM2Q00987 491 aaPredicted RBP8.62□□□□□ -1.03
SEC24D-213ENST00000514418 THAP11Q96EK4 314 aa8.62□□□□□ -1.03
SEC24D-213ENST00000514418 GPBP1L1Q9HC44 474 aaPredicted RBP8.62□□□□□ -1.03
SEC24D-213ENST00000514418 ADH1BP00325 375 aa8.61□□□□□ -1.03
SEC24D-213ENST00000514418 ATP6V1AP38606 617 aa8.61□□□□□ -1.03
SEC24D-213ENST00000514418 AMHR2Q16671 573 aa8.61□□□□□ -1.03
SEC24D-213ENST00000514418 V9GY48 417 aaPredicted RBP8.61□□□□□ -1.03
SEC24D-213ENST00000514418 RNF223E7ERA6 249 aa8.6□□□□□ -1.03
SEC24D-213ENST00000514418 CLCN1P35523 988 aa8.6□□□□□ -1.03
SEC24D-213ENST00000514418 GGCXP38435 758 aa8.6□□□□□ -1.03
SEC24D-213ENST00000514418 EMID1Q96A84 441 aaPredicted RBP8.6□□□□□ -1.03
SEC24D-213ENST00000514418 REPIN1Q9BWE0 567 aaKnown RBP8.6□□□□□ -1.03
SEC24D-213ENST00000514418 IRX2Q9BZI1 471 aaPredicted RBP8.6□□□□□ -1.03
SEC24D-213ENST00000514418 PRKD2Q9BZL6 878 aa8.6□□□□□ -1.03
SEC24D-213ENST00000514418 PARP9Q8IXQ6 854 aa8.59□□□□□ -1.03
SEC24D-213ENST00000514418 GPCPD1Q9NPB8 672 aa8.59□□□□□ -1.03
SEC24D-213ENST00000514418 FAM217BQ9NTX9 383 aaPredicted RBP8.59□□□□□ -1.03
SEC24D-213ENST00000514418 SALL2Q9Y467 1007 aaPredicted RBP8.59□□□□□ -1.03
SEC24D-213ENST00000514418 S1PR4O95977 384 aa8.58□□□□□ -1.04
SEC24D-213ENST00000514418 KDM4CQ9H3R0 1056 aa8.58□□□□□ -1.04
SEC24D-213ENST00000514418 SLC27A5Q9Y2P5 690 aa8.58□□□□□ -1.04
SEC24D-213ENST00000514418 GIGYF2Q6Y7W6 1299 aaKnown RBP8.57□□□□□ -1.04
SEC24D-213ENST00000514418 ANKLE1Q8NAG6 615 aa8.57□□□□□ -1.04
SEC24D-213ENST00000514418 BRICD5Q6PL45 260 aa8.56□□□□□ -1.04
SEC24D-213ENST00000514418 SPSB2Q99619 263 aa8.56□□□□□ -1.04
SEC24D-213ENST00000514418 FAM160A2Q8N612 972 aaPredicted RBP8.55□□□□□ -1.04
SEC24D-213ENST00000514418 SLC6A16Q9GZN6 736 aa8.55□□□□□ -1.04
SEC24D-213ENST00000514418 PPEF1O14829 653 aaPredicted RBP8.54□□□□□ -1.04
SEC24D-213ENST00000514418 KDM4AO75164 1064 aa8.54□□□□□ -1.04
SEC24D-213ENST00000514418 USP46P62068 366 aa8.53□□□□□ -1.04
SEC24D-213ENST00000514418 FMNL1O95466 1100 aaPredicted RBP8.52□□□□□ -1.05
SEC24D-213ENST00000514418 SSTR3P32745 418 aaPredicted RBP8.52□□□□□ -1.05
SEC24D-213ENST00000514418 GRIPAP1Q4V328 841 aa8.52□□□□□ -1.05
SEC24D-213ENST00000514418 PLA2G2CQ5R387 149 aa8.52□□□□□ -1.05
SEC24D-213ENST00000514418 RNF19BQ6ZMZ0 732 aa8.52□□□□□ -1.05
SEC24D-213ENST00000514418 IL27Q8NEV9 243 aa8.52□□□□□ -1.05
SEC24D-213ENST00000514418 HOXA2O43364 376 aa8.51□□□□□ -1.05
SEC24D-213ENST00000514418 MSS51Q4VC12 460 aa8.51□□□□□ -1.05
SEC24D-213ENST00000514418 LIAT1Q6ZQX7 453 aa8.51□□□□□ -1.05
SEC24D-213ENST00000514418 DDRGK1Q96HY6 314 aa8.51□□□□□ -1.05
SEC24D-213ENST00000514418 MS4A1P11836 297 aa8.5□□□□□ -1.05
SEC24D-213ENST00000514418 SLC19A1P41440 591 aa8.5□□□□□ -1.05
SEC24D-213ENST00000514418 HLA-CQ95604 372 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms