RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 NPDC1Q9NQX5 325 aaPredicted RBP9.05□□□□□ -0.96
PDLIM5-218ENST00000513341 EYA1Q99502 592 aa9.04□□□□□ -0.96
PDLIM5-218ENST00000513341 PCDHB3Q9Y5E6 796 aa9.04□□□□□ -0.96
PDLIM5-218ENST00000513341 DCAF8L2P0C7V8 631 aa9.03□□□□□ -0.96
PDLIM5-218ENST00000513341 LCE2AQ5TA79 106 aaPredicted RBP9.01□□□□□ -0.97
PDLIM5-218ENST00000513341 PADI6Q6TGC4 694 aa9.01□□□□□ -0.97
PDLIM5-218ENST00000513341 BBXQ8WY36 941 aaPredicted RBP9.01□□□□□ -0.97
PDLIM5-218ENST00000513341 GDF9O60383 454 aa8.99□□□□□ -0.97
PDLIM5-218ENST00000513341 BLOC1S3Q6QNY0 202 aa8.99□□□□□ -0.97
PDLIM5-218ENST00000513341 TREML4Q6UXN2 200 aa8.98□□□□□ -0.97
PDLIM5-218ENST00000513341 POTECB2RU33 542 aa8.97□□□□□ -0.97
PDLIM5-218ENST00000513341 LMOD2Q6P5Q4 547 aa8.97□□□□□ -0.97
PDLIM5-218ENST00000513341 LIAT1Q6ZQX7 453 aa8.97□□□□□ -0.97
PDLIM5-218ENST00000513341 ACTN4O43707 911 aaKnown RBP8.96□□□□□ -0.98
PDLIM5-218ENST00000513341 ZNF697Q5TEC3 545 aa8.96□□□□□ -0.98
PDLIM5-218ENST00000513341 DNAJB2P25686 324 aa8.95□□□□□ -0.98
PDLIM5-218ENST00000513341 CRIPAKQ8N1N5 446 aa8.94□□□□□ -0.98
PDLIM5-218ENST00000513341 WDR70Q9NW82 654 aa8.94□□□□□ -0.98
PDLIM5-218ENST00000513341 FAM187AA6NFU0 413 aa8.93□□□□□ -0.98
PDLIM5-218ENST00000513341 KMT5BQ4FZB7 885 aa8.93□□□□□ -0.98
PDLIM5-218ENST00000513341 TMEM134Q9H6X4 195 aa8.93□□□□□ -0.98
PDLIM5-218ENST00000513341 AAASQ9NRG9 546 aa8.93□□□□□ -0.98
PDLIM5-218ENST00000513341 TLL1O43897 1013 aa8.92□□□□□ -0.98
PDLIM5-218ENST00000513341 ADH1BP00325 375 aa8.92□□□□□ -0.98
PDLIM5-218ENST00000513341 S1PR4O95977 384 aa8.91□□□□□ -0.98
PDLIM5-218ENST00000513341 SPRYD3Q8NCJ5 442 aa8.91□□□□□ -0.98
PDLIM5-218ENST00000513341 RBM46Q8TBY0 533 aaKnown RBP8.9□□□□□ -0.98
PDLIM5-218ENST00000513341 PPEF1O14829 653 aaPredicted RBP8.89□□□□□ -0.99
PDLIM5-218ENST00000513341 NR1I2O75469 434 aa8.89□□□□□ -0.99
PDLIM5-218ENST00000513341 AVPP01185 164 aa8.88□□□□□ -0.99
PDLIM5-218ENST00000513341 TNFRSF10AO00220 468 aa8.87□□□□□ -0.99
PDLIM5-218ENST00000513341 SLC6A16Q9GZN6 736 aa8.87□□□□□ -0.99
PDLIM5-218ENST00000513341 ST8SIA5O15466 376 aa8.86□□□□□ -0.99
PDLIM5-218ENST00000513341 PTGDRQ13258 359 aa8.86□□□□□ -0.99
PDLIM5-218ENST00000513341 PKD2L1Q9P0L9 805 aa8.86□□□□□ -0.99
PDLIM5-218ENST00000513341 ADGRG1Q9Y653 693 aa8.86□□□□□ -0.99
PDLIM5-218ENST00000513341 CFHP08603 1231 aa8.85□□□□□ -0.99
PDLIM5-218ENST00000513341 RPIAP49247 311 aa8.85□□□□□ -0.99
PDLIM5-218ENST00000513341 PLA2G2CQ5R387 149 aa8.85□□□□□ -0.99
PDLIM5-218ENST00000513341 RCCD1A6NED2 376 aa8.83□□□□□ -1
PDLIM5-218ENST00000513341 WIPF1O43516 503 aa8.83□□□□□ -1
PDLIM5-218ENST00000513341 SMCPP49901 116 aaPredicted RBP8.83□□□□□ -1
PDLIM5-218ENST00000513341 CTC1Q2NKJ3 1217 aa8.83□□□□□ -1
PDLIM5-218ENST00000513341 STK17AQ9UEE5 414 aa8.83□□□□□ -1
PDLIM5-218ENST00000513341 SLC10A3P09131 477 aa8.82□□□□□ -1
PDLIM5-218ENST00000513341 TOR4AQ9NXH8 423 aa8.82□□□□□ -1
PDLIM5-218ENST00000513341 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.81□□□□□ -1
PDLIM5-218ENST00000513341 WFS1O76024 890 aa8.81□□□□□ -1
PDLIM5-218ENST00000513341 SCUBE3Q8IX30 993 aa8.81□□□□□ -1
PDLIM5-218ENST00000513341 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.81□□□□□ -1
PDLIM5-218ENST00000513341 NFX1Q12986 1120 aaKnown RBP8.78□□□□□ -1
PDLIM5-218ENST00000513341 ARHGEF1Q92888 912 aaKnown RBP8.78□□□□□ -1
PDLIM5-218ENST00000513341 SPSB2Q99619 263 aa8.78□□□□□ -1
PDLIM5-218ENST00000513341 AXIN1O15169 862 aa8.77□□□□□ -1.01
PDLIM5-218ENST00000513341 CD2BP2O95400 341 aaKnown RBP8.77□□□□□ -1.01
PDLIM5-218ENST00000513341 INSM1Q01101 510 aaPredicted RBP8.77□□□□□ -1.01
PDLIM5-218ENST00000513341 RSPH4AQ5TD94 716 aa8.77□□□□□ -1.01
PDLIM5-218ENST00000513341 FOXC1Q12948 553 aa8.76□□□□□ -1.01
PDLIM5-218ENST00000513341 GMPR2Q9P2T1 348 aaKnown RBP8.76□□□□□ -1.01
PDLIM5-218ENST00000513341 DACH1Q9UI36 760 aa8.76□□□□□ -1.01
PDLIM5-218ENST00000513341 C11orf95C9JLR9 678 aaPredicted RBP8.75□□□□□ -1.01
PDLIM5-218ENST00000513341 MLLT3P42568 568 aaPredicted RBP8.75□□□□□ -1.01
PDLIM5-218ENST00000513341 ABCC9O60706 1549 aa8.75□□□□□ -1.01
PDLIM5-218ENST00000513341 OATP04181 439 aa8.74□□□□□ -1.01
PDLIM5-218ENST00000513341 CYP4X1Q8N118 509 aa8.74□□□□□ -1.01
PDLIM5-218ENST00000513341 PXYLP1Q8TE99 480 aa8.73□□□□□ -1.01
PDLIM5-218ENST00000513341 THAP11Q96EK4 314 aa8.72□□□□□ -1.01
PDLIM5-218ENST00000513341 SALL2Q9Y467 1007 aaPredicted RBP8.72□□□□□ -1.01
PDLIM5-218ENST00000513341 FCHSD2O94868 740 aa8.7□□□□□ -1.02
PDLIM5-218ENST00000513341 MORN1Q5T089 497 aa8.7□□□□□ -1.02
PDLIM5-218ENST00000513341 FCF1Q9Y324 198 aaKnown RBP8.7□□□□□ -1.02
PDLIM5-218ENST00000513341 FAM161AQ3B820 660 aa8.69□□□□□ -1.02
PDLIM5-218ENST00000513341 PUS10Q3MIT2 529 aaKnown RBP8.69□□□□□ -1.02
PDLIM5-218ENST00000513341 NUTM2FA1L443 756 aa8.67□□□□□ -1.02
PDLIM5-218ENST00000513341 PAXIP1Q6ZW49 1069 aaPredicted RBP8.67□□□□□ -1.02
PDLIM5-218ENST00000513341 FAM160A2Q8N612 972 aaPredicted RBP8.67□□□□□ -1.02
PDLIM5-218ENST00000513341 LOC100996750A0A140TA64 210 aa8.66□□□□□ -1.02
PDLIM5-218ENST00000513341 WNT7AO00755 349 aa8.66□□□□□ -1.02
PDLIM5-218ENST00000513341 TERTO14746 1132 aaKnown RBP8.66□□□□□ -1.02
PDLIM5-218ENST00000513341 FMNL1O95466 1100 aaPredicted RBP8.66□□□□□ -1.02
PDLIM5-218ENST00000513341 METTL3Q86U44 580 aaKnown RBP8.66□□□□□ -1.02
PDLIM5-218ENST00000513341 KRTAP4-6Q9BYQ5 205 aa8.66□□□□□ -1.02
PDLIM5-218ENST00000513341 SENP2Q9HC62 589 aa8.66□□□□□ -1.02
PDLIM5-218ENST00000513341 TTC24A2A3L6 582 aaPredicted RBP8.65□□□□□ -1.02
PDLIM5-218ENST00000513341 ATP6V1AP38606 617 aa8.65□□□□□ -1.02
PDLIM5-218ENST00000513341 MSS51Q4VC12 460 aa8.65□□□□□ -1.02
PDLIM5-218ENST00000513341 SNIP1Q8TAD8 396 aaKnown RBP8.65□□□□□ -1.02
PDLIM5-218ENST00000513341 TRIM47Q96LD4 638 aa8.65□□□□□ -1.02
PDLIM5-218ENST00000513341 CFAP44Q96MT7 982 aa8.65□□□□□ -1.02
PDLIM5-218ENST00000513341 ATP13A2Q9NQ11 1180 aa8.65□□□□□ -1.02
PDLIM5-218ENST00000513341 SMPD1P17405 629 aa8.64□□□□□ -1.03
PDLIM5-218ENST00000513341 LCE2CQ5TA81 110 aa8.64□□□□□ -1.03
PDLIM5-218ENST00000513341 DAXXQ9UER7 740 aaPredicted RBP8.64□□□□□ -1.03
PDLIM5-218ENST00000513341 ZBTB24O43167 697 aaPredicted RBP8.63□□□□□ -1.03
PDLIM5-218ENST00000513341 HIC1Q14526 733 aa8.63□□□□□ -1.03
PDLIM5-218ENST00000513341 BRICD5Q6PL45 260 aa8.63□□□□□ -1.03
PDLIM5-218ENST00000513341 KCNV2Q8TDN2 545 aa8.62□□□□□ -1.03
PDLIM5-218ENST00000513341 KIFC2Q96AC6 838 aa8.62□□□□□ -1.03
PDLIM5-218ENST00000513341 SNRPBP14678 240 aaKnown RBP8.61□□□□□ -1.03
PDLIM5-218ENST00000513341 FUT2Q10981 343 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms