RNA–Protein interactions for RNA: ENST00000513274.5

COPB2-211, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 3

Gene COPB2, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-211ENST00000513274 TMEM94Q12767 1356 aa17.62■□□□□ 0.41
COPB2-211ENST00000513274 NUTM2DQ5VT03 806 aaPredicted RBP17.61■□□□□ 0.41
COPB2-211ENST00000513274 TET3O43151 1660 aa17.61■□□□□ 0.41
COPB2-211ENST00000513274 GCC2Q8IWJ2 1684 aa17.61■□□□□ 0.41
COPB2-211ENST00000513274 PPP1R15AO75807 674 aaPredicted RBP17.6■□□□□ 0.41
COPB2-211ENST00000513274 RPRD2Q5VT52 1461 aaKnown RBP17.56■□□□□ 0.4
COPB2-211ENST00000513274 RIMS2Q9UQ26 1411 aa17.56■□□□□ 0.4
COPB2-211ENST00000513274 E9PCH4 1651 aa17.56■□□□□ 0.4
COPB2-211ENST00000513274 UNC13BO14795 1591 aa17.56■□□□□ 0.4
COPB2-211ENST00000513274 TMEM131LA2VDJ0 1609 aa17.55■□□□□ 0.4
COPB2-211ENST00000513274 HDGFP51858 240 aaKnown RBP17.54■□□□□ 0.4
COPB2-211ENST00000513274 NUP155O75694 1391 aa17.53■□□□□ 0.4
COPB2-211ENST00000513274 CHD2O14647 1828 aaKnown RBP17.53■□□□□ 0.4
COPB2-211ENST00000513274 ZFYVE9O95405 1425 aa17.53■□□□□ 0.4
COPB2-211ENST00000513274 ROCK1Q13464 1354 aa17.52■□□□□ 0.39
COPB2-211ENST00000513274 PLEKHG1Q9ULL1 1385 aa17.52■□□□□ 0.39
COPB2-211ENST00000513274 ROBO1Q9Y6N7 1651 aa17.52■□□□□ 0.39
COPB2-211ENST00000513274 FAM135BQ49AJ0 1406 aa17.51■□□□□ 0.39
COPB2-211ENST00000513274 MSH6P52701 1360 aa17.5■□□□□ 0.39
COPB2-211ENST00000513274 IQGAP3Q86VI3 1631 aa17.5■□□□□ 0.39
COPB2-211ENST00000513274 NWD1Q149M9 1564 aa17.49■□□□□ 0.39
COPB2-211ENST00000513274 C14orf37Q86TY3 774 aa17.49■□□□□ 0.39
COPB2-211ENST00000513274 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.49■□□□□ 0.39
COPB2-211ENST00000513274 SLAIN2Q9P270 581 aa17.48■□□□□ 0.39
COPB2-211ENST00000513274 RGS17Q9UGC6 210 aaPredicted RBP17.48■□□□□ 0.39
COPB2-211ENST00000513274 TBX22Q9Y458 520 aa17.48■□□□□ 0.39
COPB2-211ENST00000513274 NKTRP30414 1462 aaKnown RBP17.48■□□□□ 0.39
COPB2-211ENST00000513274 ZNF326Q5BKZ1 582 aaKnown RBP17.44■□□□□ 0.38
COPB2-211ENST00000513274 ADAMTS13Q76LX8 1427 aa17.44■□□□□ 0.38
COPB2-211ENST00000513274 PHLPP1O60346 1717 aa17.44■□□□□ 0.38
COPB2-211ENST00000513274 AMOTL2Q9Y2J4 779 aa17.42■□□□□ 0.38
COPB2-211ENST00000513274 SPHKAPQ2M3C7 1700 aa17.41■□□□□ 0.38
COPB2-211ENST00000513274 POTEAQ6S8J7 498 aa17.4■□□□□ 0.38
COPB2-211ENST00000513274 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.39■□□□□ 0.37
COPB2-211ENST00000513274 PTPRUQ92729 1446 aa17.38■□□□□ 0.37
COPB2-211ENST00000513274 ATF3P18847 181 aa17.38■□□□□ 0.37
COPB2-211ENST00000513274 TRIM52Q96A61 297 aa17.37■□□□□ 0.37
COPB2-211ENST00000513274 C19orf44Q9H6X5 657 aa17.37■□□□□ 0.37
COPB2-211ENST00000513274 TRPM2O94759 1503 aa17.37■□□□□ 0.37
COPB2-211ENST00000513274 DIP2AQ14689 1571 aa17.36■□□□□ 0.37
COPB2-211ENST00000513274 CADPS2Q86UW7 1296 aa17.35■□□□□ 0.37
COPB2-211ENST00000513274 PIK3R4Q99570 1358 aa17.35■□□□□ 0.37
COPB2-211ENST00000513274 JCADQ9P266 1359 aa17.34■□□□□ 0.37
COPB2-211ENST00000513274 CLTCL1P53675 1640 aa17.33■□□□□ 0.37
COPB2-211ENST00000513274 NRXN3Q9Y4C0 1643 aa17.33■□□□□ 0.37
COPB2-211ENST00000513274 NCOA3Q9Y6Q9 1424 aa17.33■□□□□ 0.36
COPB2-211ENST00000513274 KIF1BO60333 1816 aa17.33■□□□□ 0.36
COPB2-211ENST00000513274 NAIPQ13075 1403 aa17.32■□□□□ 0.36
COPB2-211ENST00000513274 RRBP1Q9P2E9 1410 aaKnown RBP17.32■□□□□ 0.36
COPB2-211ENST00000513274 COL16A1Q07092 1604 aaPredicted RBP17.32■□□□□ 0.36
COPB2-211ENST00000513274 METP08581 1390 aa17.31■□□□□ 0.36
COPB2-211ENST00000513274 MEX3CQ5U5Q3 659 aaKnown RBP17.3■□□□□ 0.36
COPB2-211ENST00000513274 BRINP3Q76B58 766 aa17.29■□□□□ 0.36
COPB2-211ENST00000513274 SETBP1Q9Y6X0 1596 aa17.28■□□□□ 0.36
COPB2-211ENST00000513274 NUTM2BA6NNL0 878 aaPredicted RBP17.28■□□□□ 0.36
COPB2-211ENST00000513274 NUTM2EB1AL46 878 aaPredicted RBP17.28■□□□□ 0.36
COPB2-211ENST00000513274 NUTM2AQ8IVF1 878 aaPredicted RBP17.28■□□□□ 0.36
COPB2-211ENST00000513274 XRN1Q8IZH2 1706 aaKnown RBP17.27■□□□□ 0.36
COPB2-211ENST00000513274 NEXMIFQ5QGS0 1516 aa17.27■□□□□ 0.36
COPB2-211ENST00000513274 SLC4A1APQ9BWU0 796 aaKnown RBP17.27■□□□□ 0.36
COPB2-211ENST00000513274 LRP6O75581 1613 aa17.26■□□□□ 0.35
COPB2-211ENST00000513274 FOXD1Q16676 465 aa17.26■□□□□ 0.35
COPB2-211ENST00000513274 DDX17Q92841 729 aaKnown RBP17.26■□□□□ 0.35
COPB2-211ENST00000513274 SETD1AO15047 1707 aaKnown RBP17.26■□□□□ 0.35
COPB2-211ENST00000513274 AHDC1Q5TGY3 1603 aaPredicted RBP17.25■□□□□ 0.35
COPB2-211ENST00000513274 SPATA31A6Q5VVP1 1343 aa17.23■□□□□ 0.35
COPB2-211ENST00000513274 SHPRHQ149N8 1683 aa17.23■□□□□ 0.35
COPB2-211ENST00000513274 MST1RQ04912 1400 aa17.21■□□□□ 0.35
COPB2-211ENST00000513274 VGFO15240 615 aaPredicted RBP17.21■□□□□ 0.35
COPB2-211ENST00000513274 NALCNQ8IZF0 1738 aa17.21■□□□□ 0.35
COPB2-211ENST00000513274 ASXL1Q8IXJ9 1541 aa17.21■□□□□ 0.34
COPB2-211ENST00000513274 HFM1A2PYH4 1435 aa17.21■□□□□ 0.34
COPB2-211ENST00000513274 DCCP43146 1447 aa17.2■□□□□ 0.34
COPB2-211ENST00000513274 RGL3Q3MIN7 710 aa17.18■□□□□ 0.34
COPB2-211ENST00000513274 ZNF772Q68DY9 489 aaPredicted RBP17.18■□□□□ 0.34
COPB2-211ENST00000513274 ADGRL3Q9HAR2 1447 aa17.18■□□□□ 0.34
COPB2-211ENST00000513274 LRRC59Q96AG4 307 aaKnown RBP17.17■□□□□ 0.34
COPB2-211ENST00000513274 PPLO60437 1756 aa17.17■□□□□ 0.34
COPB2-211ENST00000513274 NHSL1Q5SYE7 1610 aa17.17■□□□□ 0.34
COPB2-211ENST00000513274 ROBO2Q9HCK4 1378 aa17.16■□□□□ 0.34
COPB2-211ENST00000513274 ORAI2Q96SN7 254 aa17.16■□□□□ 0.34
COPB2-211ENST00000513274 RPGRIP1LQ68CZ1 1315 aa17.15■□□□□ 0.34
COPB2-211ENST00000513274 C8orf37Q96NL8 207 aa17.14■□□□□ 0.33
COPB2-211ENST00000513274 AFF2P51816 1311 aa17.14■□□□□ 0.33
COPB2-211ENST00000513274 SETD5Q9C0A6 1442 aa17.13■□□□□ 0.33
COPB2-211ENST00000513274 C1orf167Q5SNV9 1468 aa17.13■□□□□ 0.33
COPB2-211ENST00000513274 RXRBP28702 533 aa17.13■□□□□ 0.33
COPB2-211ENST00000513274 STK26Q9P289 416 aa17.13■□□□□ 0.33
COPB2-211ENST00000513274 ADGRF5Q8IZF2 1346 aa17.13■□□□□ 0.33
COPB2-211ENST00000513274 MPHOSPH9Q99550 1183 aa17.12■□□□□ 0.33
COPB2-211ENST00000513274 ADAMTS2O95450 1211 aa17.11■□□□□ 0.33
COPB2-211ENST00000513274 NUTM2FA1L443 756 aa17.1■□□□□ 0.33
COPB2-211ENST00000513274 PNPLA6Q8IY17 1366 aa17.1■□□□□ 0.33
COPB2-211ENST00000513274 TMEM132EQ6IEE7 984 aa17.09■□□□□ 0.33
COPB2-211ENST00000513274 WAPLQ7Z5K2 1190 aa17.09■□□□□ 0.33
COPB2-211ENST00000513274 CCDC144AA2RUR9 1427 aa17.09■□□□□ 0.33
COPB2-211ENST00000513274 PTCH1Q13635 1447 aa17.09■□□□□ 0.33
COPB2-211ENST00000513274 NGLY1Q96IV0 654 aa17.08■□□□□ 0.32
COPB2-211ENST00000513274 QTRT2Q9H974 415 aaKnown RBP17.08■□□□□ 0.32
COPB2-211ENST00000513274 ESCO1Q5FWF5 840 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms