RNA–Protein interactions for RNA: ENST00000511978.5

MATR3-218, Transcript of matrin 3, humanhuman

TSL 3

Gene MATR3, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-218ENST00000511978 GIGYF2Q6Y7W6 1299 aaKnown RBP11.36□□□□□ -0.59
MATR3-218ENST00000511978 ZFRQ96KR1 1074 aaKnown RBP11.36□□□□□ -0.59
MATR3-218ENST00000511978 SWT1Q5T5J6 900 aaKnown RBP11.34□□□□□ -0.59
MATR3-218ENST00000511978 FAM217BQ9NTX9 383 aaPredicted RBP11.34□□□□□ -0.59
MATR3-218ENST00000511978 PCDH10Q9P2E7 1040 aa11.34□□□□□ -0.59
MATR3-218ENST00000511978 STAC3Q96MF2 364 aa11.33□□□□□ -0.6
MATR3-218ENST00000511978 SAMD7Q7Z3H4 446 aa11.32□□□□□ -0.6
MATR3-218ENST00000511978 MS4A1P11836 297 aa11.31□□□□□ -0.6
MATR3-218ENST00000511978 SSTR3P32745 418 aaPredicted RBP11.31□□□□□ -0.6
MATR3-218ENST00000511978 HDGFP51858 240 aaKnown RBP11.29□□□□□ -0.6
MATR3-218ENST00000511978 GOLGA8CPA6NN73 597 aa11.28□□□□□ -0.6
MATR3-218ENST00000511978 DDX11L8A8MPP1 907 aa11.27□□□□□ -0.61
MATR3-218ENST00000511978 SULF1Q8IWU6 871 aa11.27□□□□□ -0.61
MATR3-218ENST00000511978 ANKK1Q8NFD2 765 aa11.27□□□□□ -0.61
MATR3-218ENST00000511978 FAM117AQ9C073 453 aa11.27□□□□□ -0.61
MATR3-218ENST00000511978 CD46P15529 392 aa11.26□□□□□ -0.61
MATR3-218ENST00000511978 SLF2Q8IX21 1173 aa11.26□□□□□ -0.61
MATR3-218ENST00000511978 WNT2BQ93097 391 aa11.26□□□□□ -0.61
MATR3-218ENST00000511978 LRCH3Q96II8 777 aa11.26□□□□□ -0.61
MATR3-218ENST00000511978 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.26□□□□□ -0.61
MATR3-218ENST00000511978 SLC10A3P09131 477 aa11.25□□□□□ -0.61
MATR3-218ENST00000511978 SOWAHBA6NEL2 793 aa11.24□□□□□ -0.61
MATR3-218ENST00000511978 PLEKHG3A1L390 1219 aa11.23□□□□□ -0.61
MATR3-218ENST00000511978 BCAMP50895 628 aa11.23□□□□□ -0.61
MATR3-218ENST00000511978 DDRGK1Q96HY6 314 aa11.23□□□□□ -0.61
MATR3-218ENST00000511978 BEGAINQ9BUH8 593 aa11.23□□□□□ -0.61
MATR3-218ENST00000511978 SLC4A3P48751 1232 aa11.22□□□□□ -0.61
MATR3-218ENST00000511978 RDH13Q8NBN7 331 aa11.22□□□□□ -0.61
MATR3-218ENST00000511978 IL27Q8NEV9 243 aa11.22□□□□□ -0.61
MATR3-218ENST00000511978 RSPH4AQ5TD94 716 aa11.21□□□□□ -0.61
MATR3-218ENST00000511978 RNF40O75150 1001 aa11.2□□□□□ -0.62
MATR3-218ENST00000511978 THSD4Q6ZMP0 1018 aa11.2□□□□□ -0.62
MATR3-218ENST00000511978 SPNS2Q8IVW8 549 aa11.2□□□□□ -0.62
MATR3-218ENST00000511978 KCTD12Q96CX2 325 aaKnown RBP11.2□□□□□ -0.62
MATR3-218ENST00000511978 MYT1LQ9UL68 1186 aa11.2□□□□□ -0.62
MATR3-218ENST00000511978 GCGRP47871 477 aa11.18□□□□□ -0.62
MATR3-218ENST00000511978 TSR3Q9UJK0 312 aaKnown RBP11.18□□□□□ -0.62
MATR3-218ENST00000511978 HPS5Q9UPZ3 1129 aa11.18□□□□□ -0.62
MATR3-218ENST00000511978 TMEM132AQ24JP5 1023 aa11.17□□□□□ -0.62
MATR3-218ENST00000511978 NECTIN2Q92692 538 aa11.17□□□□□ -0.62
MATR3-218ENST00000511978 CFHP08603 1231 aa11.16□□□□□ -0.62
MATR3-218ENST00000511978 PPP4CP60510 307 aa11.15□□□□□ -0.62
MATR3-218ENST00000511978 SPIRE2Q8WWL2 714 aa11.14□□□□□ -0.63
MATR3-218ENST00000511978 TBC1D2Q9BYX2 928 aa11.14□□□□□ -0.63
MATR3-218ENST00000511978 WBP1LQ9NX94 342 aa11.14□□□□□ -0.63
MATR3-218ENST00000511978 KDM4AO75164 1064 aa11.12□□□□□ -0.63
MATR3-218ENST00000511978 NUTM1Q86Y26 1132 aa11.12□□□□□ -0.63
MATR3-218ENST00000511978 APLP1P51693 650 aa11.11□□□□□ -0.63
MATR3-218ENST00000511978 DIXDC1Q155Q3 683 aa11.11□□□□□ -0.63
MATR3-218ENST00000511978 KMT5BQ4FZB7 885 aa11.11□□□□□ -0.63
MATR3-218ENST00000511978 RSPH6AQ9H0K4 717 aa11.11□□□□□ -0.63
MATR3-218ENST00000511978 ACTN4O43707 911 aaKnown RBP11.1□□□□□ -0.63
MATR3-218ENST00000511978 USP46P62068 366 aa11.1□□□□□ -0.63
MATR3-218ENST00000511978 SH3D19Q5HYK7 790 aa11.1□□□□□ -0.63
MATR3-218ENST00000511978 MYSM1Q5VVJ2 828 aa11.1□□□□□ -0.63
MATR3-218ENST00000511978 RNF166Q96A37 237 aaPredicted RBP11.1□□□□□ -0.63
MATR3-218ENST00000511978 GOPCQ9HD26 462 aa11.1□□□□□ -0.63
MATR3-218ENST00000511978 PRR14Q9BWN1 585 aa11.09□□□□□ -0.63
MATR3-218ENST00000511978 PTPN5P54829 565 aa11.08□□□□□ -0.64
MATR3-218ENST00000511978 FUT2Q10981 343 aa11.08□□□□□ -0.64
MATR3-218ENST00000511978 HOXA2O43364 376 aa11.07□□□□□ -0.64
MATR3-218ENST00000511978 SKIV2LQ15477 1246 aaKnown RBP11.07□□□□□ -0.64
MATR3-218ENST00000511978 MOXD2PA6NHM9 499 aa11.06□□□□□ -0.64
MATR3-218ENST00000511978 MMRN1Q13201 1228 aa11.06□□□□□ -0.64
MATR3-218ENST00000511978 NYAP1Q6ZVC0 841 aa11.06□□□□□ -0.64
MATR3-218ENST00000511978 NDUFV2P19404 249 aa11.05□□□□□ -0.64
MATR3-218ENST00000511978 ATP6V1AP38606 617 aa11.05□□□□□ -0.64
MATR3-218ENST00000511978 SPTLC1O15269 473 aa11.04□□□□□ -0.64
MATR3-218ENST00000511978 GJA5P36382 358 aa11.04□□□□□ -0.64
MATR3-218ENST00000511978 RSBN1LQ6PCB5 846 aaPredicted RBP11.04□□□□□ -0.64
MATR3-218ENST00000511978 RIC3Q7Z5B4 369 aa11.04□□□□□ -0.64
MATR3-218ENST00000511978 POLR3EQ9NVU0 708 aa11.04□□□□□ -0.64
MATR3-218ENST00000511978 CLK2P49760 499 aaKnown RBP11.03□□□□□ -0.64
MATR3-218ENST00000511978 GRIPAP1Q4V328 841 aa11.03□□□□□ -0.64
MATR3-218ENST00000511978 MORN1Q5T089 497 aa11.03□□□□□ -0.64
MATR3-218ENST00000511978 HLA-CQ95604 372 aa11.03□□□□□ -0.64
MATR3-218ENST00000511978 LIMD1Q9UGP4 676 aa11.03□□□□□ -0.64
MATR3-218ENST00000511978 PUS10Q3MIT2 529 aaKnown RBP11.02□□□□□ -0.65
MATR3-218ENST00000511978 PLSCR2Q9NRY7 297 aa11.02□□□□□ -0.65
MATR3-218ENST00000511978 HCSTQ9UBK5 93 aa11.02□□□□□ -0.65
MATR3-218ENST00000511978 GUCA2AQ02747 115 aa11.01□□□□□ -0.65
MATR3-218ENST00000511978 TUSC1Q2TAM9 212 aa11.01□□□□□ -0.65
MATR3-218ENST00000511978 PROCA1Q8NCQ7 364 aaPredicted RBP11.01□□□□□ -0.65
MATR3-218ENST00000511978 PCMTD1Q96MG8 357 aaPredicted RBP11.01□□□□□ -0.65
MATR3-218ENST00000511978 PCDHB3Q9Y5E6 796 aa11.01□□□□□ -0.65
MATR3-218ENST00000511978 FDX1P10109 184 aa11□□□□□ -0.65
MATR3-218ENST00000511978 PCDHGC3Q9UN70 934 aa11□□□□□ -0.65
MATR3-218ENST00000511978 BLOC1S3Q6QNY0 202 aa10.99□□□□□ -0.65
MATR3-218ENST00000511978 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.99□□□□□ -0.65
MATR3-218ENST00000511978 PCDHB15Q9Y5E8 787 aa10.99□□□□□ -0.65
MATR3-218ENST00000511978 SLC27A5Q9Y2P5 690 aa10.98□□□□□ -0.65
MATR3-218ENST00000511978 SCUBE3Q8IX30 993 aa10.96□□□□□ -0.65
MATR3-218ENST00000511978 NR1I2O75469 434 aa10.95□□□□□ -0.66
MATR3-218ENST00000511978 MTRQ99707 1265 aa10.95□□□□□ -0.66
MATR3-218ENST00000511978 LILRB3O75022 631 aa10.94□□□□□ -0.66
MATR3-218ENST00000511978 COPS2P61201 443 aa10.94□□□□□ -0.66
MATR3-218ENST00000511978 QPCTQ16769 361 aa10.94□□□□□ -0.66
MATR3-218ENST00000511978 CSPP1Q1MSJ5 1256 aa10.94□□□□□ -0.66
MATR3-218ENST00000511978 TJAP1Q5JTD0 557 aa10.94□□□□□ -0.66
MATR3-218ENST00000511978 PRPF38BQ5VTL8 546 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms