RNA–Protein interactions for RNA: ENST00000509855.1

COL6A4P2-205, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

BASIC

Gene COL6A4P2, Length 506 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-205ENST00000509855 DAXXQ9UER7 740 aaPredicted RBP13.15□□□□□ -0.3
COL6A4P2-205ENST00000509855 PCDH10Q9P2E7 1040 aa13.14□□□□□ -0.31
COL6A4P2-205ENST00000509855 ZFRQ96KR1 1074 aaKnown RBP13.12□□□□□ -0.31
COL6A4P2-205ENST00000509855 FAM217BQ9NTX9 383 aaPredicted RBP13.12□□□□□ -0.31
COL6A4P2-205ENST00000509855 SWT1Q5T5J6 900 aaKnown RBP13.09□□□□□ -0.31
COL6A4P2-205ENST00000509855 MS4A1P11836 297 aa13.08□□□□□ -0.32
COL6A4P2-205ENST00000509855 STAC3Q96MF2 364 aa13.08□□□□□ -0.32
COL6A4P2-205ENST00000509855 SSTR3P32745 418 aaPredicted RBP13.07□□□□□ -0.32
COL6A4P2-205ENST00000509855 SAMD7Q7Z3H4 446 aa13.07□□□□□ -0.32
COL6A4P2-205ENST00000509855 SULF1Q8IWU6 871 aa13.07□□□□□ -0.32
COL6A4P2-205ENST00000509855 HDGFP51858 240 aaKnown RBP13.06□□□□□ -0.32
COL6A4P2-205ENST00000509855 CD46P15529 392 aa13.04□□□□□ -0.32
COL6A4P2-205ENST00000509855 SLF2Q8IX21 1173 aa13.03□□□□□ -0.32
COL6A4P2-205ENST00000509855 ANKK1Q8NFD2 765 aa13.03□□□□□ -0.32
COL6A4P2-205ENST00000509855 DDRGK1Q96HY6 314 aa13.03□□□□□ -0.32
COL6A4P2-205ENST00000509855 FAM117AQ9C073 453 aa13.03□□□□□ -0.32
COL6A4P2-205ENST00000509855 GOLGA8CPA6NN73 597 aa13.02□□□□□ -0.33
COL6A4P2-205ENST00000509855 LRCH3Q96II8 777 aa13.02□□□□□ -0.33
COL6A4P2-205ENST00000509855 DDX11L8A8MPP1 907 aa13.01□□□□□ -0.33
COL6A4P2-205ENST00000509855 SLC4A3P48751 1232 aa13.01□□□□□ -0.33
COL6A4P2-205ENST00000509855 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.01□□□□□ -0.33
COL6A4P2-205ENST00000509855 SOWAHBA6NEL2 793 aa13□□□□□ -0.33
COL6A4P2-205ENST00000509855 PLEKHG3A1L390 1219 aa12.99□□□□□ -0.33
COL6A4P2-205ENST00000509855 SLC10A3P09131 477 aa12.99□□□□□ -0.33
COL6A4P2-205ENST00000509855 RSPH4AQ5TD94 716 aa12.99□□□□□ -0.33
COL6A4P2-205ENST00000509855 WNT2BQ93097 391 aa12.99□□□□□ -0.33
COL6A4P2-205ENST00000509855 BEGAINQ9BUH8 593 aa12.99□□□□□ -0.33
COL6A4P2-205ENST00000509855 TMEM132AQ24JP5 1023 aa12.98□□□□□ -0.33
COL6A4P2-205ENST00000509855 NECTIN2Q92692 538 aa12.97□□□□□ -0.33
COL6A4P2-205ENST00000509855 RDH13Q8NBN7 331 aa12.95□□□□□ -0.34
COL6A4P2-205ENST00000509855 IL27Q8NEV9 243 aa12.95□□□□□ -0.34
COL6A4P2-205ENST00000509855 BCAMP50895 628 aa12.94□□□□□ -0.34
COL6A4P2-205ENST00000509855 THSD4Q6ZMP0 1018 aa12.94□□□□□ -0.34
COL6A4P2-205ENST00000509855 GCGRP47871 477 aa12.93□□□□□ -0.34
COL6A4P2-205ENST00000509855 TSR3Q9UJK0 312 aaKnown RBP12.93□□□□□ -0.34
COL6A4P2-205ENST00000509855 RNF40O75150 1001 aa12.92□□□□□ -0.34
COL6A4P2-205ENST00000509855 MYT1LQ9UL68 1186 aa12.92□□□□□ -0.34
COL6A4P2-205ENST00000509855 SPNS2Q8IVW8 549 aa12.91□□□□□ -0.34
COL6A4P2-205ENST00000509855 KCTD12Q96CX2 325 aaKnown RBP12.91□□□□□ -0.34
COL6A4P2-205ENST00000509855 HPS5Q9UPZ3 1129 aa12.91□□□□□ -0.34
COL6A4P2-205ENST00000509855 CFHP08603 1231 aa12.9□□□□□ -0.34
COL6A4P2-205ENST00000509855 DIXDC1Q155Q3 683 aa12.9□□□□□ -0.34
COL6A4P2-205ENST00000509855 GOPCQ9HD26 462 aa12.9□□□□□ -0.34
COL6A4P2-205ENST00000509855 SPIRE2Q8WWL2 714 aa12.89□□□□□ -0.35
COL6A4P2-205ENST00000509855 RSPH6AQ9H0K4 717 aa12.89□□□□□ -0.35
COL6A4P2-205ENST00000509855 PPP4CP60510 307 aa12.88□□□□□ -0.35
COL6A4P2-205ENST00000509855 SH3D19Q5HYK7 790 aa12.88□□□□□ -0.35
COL6A4P2-205ENST00000509855 KDM4AO75164 1064 aa12.87□□□□□ -0.35
COL6A4P2-205ENST00000509855 PRR14Q9BWN1 585 aa12.87□□□□□ -0.35
COL6A4P2-205ENST00000509855 TBC1D2Q9BYX2 928 aa12.87□□□□□ -0.35
COL6A4P2-205ENST00000509855 USP46P62068 366 aa12.86□□□□□ -0.35
COL6A4P2-205ENST00000509855 KMT5BQ4FZB7 885 aa12.86□□□□□ -0.35
COL6A4P2-205ENST00000509855 NUTM1Q86Y26 1132 aa12.86□□□□□ -0.35
COL6A4P2-205ENST00000509855 ACTN4O43707 911 aaKnown RBP12.85□□□□□ -0.35
COL6A4P2-205ENST00000509855 MYSM1Q5VVJ2 828 aa12.85□□□□□ -0.35
COL6A4P2-205ENST00000509855 NYAP1Q6ZVC0 841 aa12.85□□□□□ -0.35
COL6A4P2-205ENST00000509855 WBP1LQ9NX94 342 aa12.85□□□□□ -0.35
COL6A4P2-205ENST00000509855 HOXA2O43364 376 aa12.82□□□□□ -0.36
COL6A4P2-205ENST00000509855 GJA5P36382 358 aa12.82□□□□□ -0.36
COL6A4P2-205ENST00000509855 APLP1P51693 650 aa12.82□□□□□ -0.36
COL6A4P2-205ENST00000509855 SKIV2LQ15477 1246 aaKnown RBP12.82□□□□□ -0.36
COL6A4P2-205ENST00000509855 FUT2Q10981 343 aa12.81□□□□□ -0.36
COL6A4P2-205ENST00000509855 RNF166Q96A37 237 aaPredicted RBP12.81□□□□□ -0.36
COL6A4P2-205ENST00000509855 ATP6V1AP38606 617 aa12.79□□□□□ -0.36
COL6A4P2-205ENST00000509855 TUSC1Q2TAM9 212 aa12.79□□□□□ -0.36
COL6A4P2-205ENST00000509855 MOXD2PA6NHM9 499 aa12.78□□□□□ -0.36
COL6A4P2-205ENST00000509855 SPTLC1O15269 473 aa12.78□□□□□ -0.36
COL6A4P2-205ENST00000509855 GRIPAP1Q4V328 841 aa12.78□□□□□ -0.36
COL6A4P2-205ENST00000509855 RSBN1LQ6PCB5 846 aaPredicted RBP12.78□□□□□ -0.36
COL6A4P2-205ENST00000509855 CLK2P49760 499 aaKnown RBP12.77□□□□□ -0.37
COL6A4P2-205ENST00000509855 PTPN5P54829 565 aa12.76□□□□□ -0.37
COL6A4P2-205ENST00000509855 RIC3Q7Z5B4 369 aa12.76□□□□□ -0.37
COL6A4P2-205ENST00000509855 MORN1Q5T089 497 aa12.75□□□□□ -0.37
COL6A4P2-205ENST00000509855 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.75□□□□□ -0.37
COL6A4P2-205ENST00000509855 LIMD1Q9UGP4 676 aa12.75□□□□□ -0.37
COL6A4P2-205ENST00000509855 NDUFV2P19404 249 aa12.74□□□□□ -0.37
COL6A4P2-205ENST00000509855 MMRN1Q13201 1228 aa12.74□□□□□ -0.37
COL6A4P2-205ENST00000509855 PCMTD1Q96MG8 357 aaPredicted RBP12.74□□□□□ -0.37
COL6A4P2-205ENST00000509855 POLR3EQ9NVU0 708 aa12.74□□□□□ -0.37
COL6A4P2-205ENST00000509855 HCSTQ9UBK5 93 aa12.74□□□□□ -0.37
COL6A4P2-205ENST00000509855 PCDHB3Q9Y5E6 796 aa12.73□□□□□ -0.37
COL6A4P2-205ENST00000509855 FDX1P10109 184 aa12.72□□□□□ -0.37
COL6A4P2-205ENST00000509855 HLA-CQ95604 372 aa12.72□□□□□ -0.37
COL6A4P2-205ENST00000509855 PUS10Q3MIT2 529 aaKnown RBP12.7□□□□□ -0.38
COL6A4P2-205ENST00000509855 PROCA1Q8NCQ7 364 aaPredicted RBP12.7□□□□□ -0.38
COL6A4P2-205ENST00000509855 PCDHGC3Q9UN70 934 aa12.7□□□□□ -0.38
COL6A4P2-205ENST00000509855 GUCA2AQ02747 115 aa12.69□□□□□ -0.38
COL6A4P2-205ENST00000509855 PRPF38BQ5VTL8 546 aaKnown RBP12.69□□□□□ -0.38
COL6A4P2-205ENST00000509855 SLC27A5Q9Y2P5 690 aa12.69□□□□□ -0.38
COL6A4P2-205ENST00000509855 BLOC1S3Q6QNY0 202 aa12.68□□□□□ -0.38
COL6A4P2-205ENST00000509855 SALL2Q9Y467 1007 aaPredicted RBP12.68□□□□□ -0.38
COL6A4P2-205ENST00000509855 PCDHB15Q9Y5E8 787 aa12.68□□□□□ -0.38
COL6A4P2-205ENST00000509855 NR1I2O75469 434 aa12.67□□□□□ -0.38
COL6A4P2-205ENST00000509855 LILRB3O75022 631 aa12.66□□□□□ -0.38
COL6A4P2-205ENST00000509855 PPP2R2DQ66LE6 453 aa12.66□□□□□ -0.38
COL6A4P2-205ENST00000509855 SCUBE3Q8IX30 993 aa12.66□□□□□ -0.38
COL6A4P2-205ENST00000509855 Q3C1V9 767 aa12.65□□□□□ -0.38
COL6A4P2-205ENST00000509855 TJAP1Q5JTD0 557 aa12.64□□□□□ -0.39
COL6A4P2-205ENST00000509855 MTRQ99707 1265 aa12.64□□□□□ -0.39
COL6A4P2-205ENST00000509855 ZBTB3Q9H5J0 574 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms