RNA–Protein interactions for RNA: ENST00000509297.5

SMAD5-205, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 854 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-205ENST00000509297 TMEM94Q12767 1356 aa23.62■■□□□ 1.37
SMAD5-205ENST00000509297 PLEKHG1Q9ULL1 1385 aa23.62■■□□□ 1.37
SMAD5-205ENST00000509297 NKTRP30414 1462 aaKnown RBP23.62■■□□□ 1.37
SMAD5-205ENST00000509297 NWD1Q149M9 1564 aa23.61■■□□□ 1.37
SMAD5-205ENST00000509297 E9PCH4 1651 aa23.6■■□□□ 1.37
SMAD5-205ENST00000509297 RIMS2Q9UQ26 1411 aa23.59■■□□□ 1.37
SMAD5-205ENST00000509297 FAM135BQ49AJ0 1406 aa23.59■■□□□ 1.37
SMAD5-205ENST00000509297 NUP155O75694 1391 aa23.58■■□□□ 1.37
SMAD5-205ENST00000509297 PROSER2Q86WR7 435 aaPredicted RBP23.57■■□□□ 1.36
SMAD5-205ENST00000509297 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.57■■□□□ 1.36
SMAD5-205ENST00000509297 MYO5BQ9ULV0 1848 aa23.55■■□□□ 1.36
SMAD5-205ENST00000509297 PPP1R15AO75807 674 aaPredicted RBP23.54■■□□□ 1.36
SMAD5-205ENST00000509297 BCANQ96GW7 911 aa23.54■■□□□ 1.36
SMAD5-205ENST00000509297 TBX22Q9Y458 520 aa23.54■■□□□ 1.36
SMAD5-205ENST00000509297 ITGAEP38570 1179 aa23.53■■□□□ 1.36
SMAD5-205ENST00000509297 RRBP1Q9P2E9 1410 aaKnown RBP23.5■■□□□ 1.35
SMAD5-205ENST00000509297 CHD2O14647 1828 aaKnown RBP23.49■■□□□ 1.35
SMAD5-205ENST00000509297 PPARGC1BQ86YN6 1023 aaKnown RBP23.49■■□□□ 1.35
SMAD5-205ENST00000509297 PIK3R4Q99570 1358 aa23.49■■□□□ 1.35
SMAD5-205ENST00000509297 NCOA3Q9Y6Q9 1424 aa23.49■■□□□ 1.35
SMAD5-205ENST00000509297 DIP2AQ14689 1571 aa23.48■■□□□ 1.35
SMAD5-205ENST00000509297 CHGAP10645 457 aaKnown RBP23.48■■□□□ 1.35
SMAD5-205ENST00000509297 MSH6P52701 1360 aa23.48■■□□□ 1.35
SMAD5-205ENST00000509297 ADAMTS13Q76LX8 1427 aa23.48■■□□□ 1.35
SMAD5-205ENST00000509297 PHF23Q9BUL5 403 aaPredicted RBP23.46■■□□□ 1.35
SMAD5-205ENST00000509297 RBM33Q96EV2 1170 aaKnown RBP23.45■■□□□ 1.34
SMAD5-205ENST00000509297 SENP3Q9H4L4 574 aaPredicted RBP23.45■■□□□ 1.34
SMAD5-205ENST00000509297 ROBO1Q9Y6N7 1651 aa23.44■■□□□ 1.34
SMAD5-205ENST00000509297 SLAIN2Q9P270 581 aa23.42■■□□□ 1.34
SMAD5-205ENST00000509297 SPHKAPQ2M3C7 1700 aa23.41■■□□□ 1.34
SMAD5-205ENST00000509297 NAIPQ13075 1403 aa23.41■■□□□ 1.34
SMAD5-205ENST00000509297 TRPM2O94759 1503 aa23.39■■□□□ 1.34
SMAD5-205ENST00000509297 NUTM2DQ5VT03 806 aaPredicted RBP23.39■■□□□ 1.33
SMAD5-205ENST00000509297 SETBP1Q9Y6X0 1596 aa23.36■■□□□ 1.33
SMAD5-205ENST00000509297 C19orf44Q9H6X5 657 aa23.35■■□□□ 1.33
SMAD5-205ENST00000509297 HFM1A2PYH4 1435 aa23.33■■□□□ 1.33
SMAD5-205ENST00000509297 CADPS2Q86UW7 1296 aa23.33■■□□□ 1.33
SMAD5-205ENST00000509297 AMOTL2Q9Y2J4 779 aa23.33■■□□□ 1.33
SMAD5-205ENST00000509297 NRXN3Q9Y4C0 1643 aa23.33■■□□□ 1.32
SMAD5-205ENST00000509297 PTPRUQ92729 1446 aa23.33■■□□□ 1.32
SMAD5-205ENST00000509297 RGS17Q9UGC6 210 aaPredicted RBP23.32■■□□□ 1.32
SMAD5-205ENST00000509297 C14orf37Q86TY3 774 aa23.31■■□□□ 1.32
SMAD5-205ENST00000509297 CLTCL1P53675 1640 aa23.3■■□□□ 1.32
SMAD5-205ENST00000509297 ZNF326Q5BKZ1 582 aaKnown RBP23.3■■□□□ 1.32
SMAD5-205ENST00000509297 ATF3P18847 181 aa23.29■■□□□ 1.32
SMAD5-205ENST00000509297 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.29■■□□□ 1.32
SMAD5-205ENST00000509297 JCADQ9P266 1359 aa23.28■■□□□ 1.32
SMAD5-205ENST00000509297 XRN1Q8IZH2 1706 aaKnown RBP23.28■■□□□ 1.32
SMAD5-205ENST00000509297 DCCP43146 1447 aa23.28■■□□□ 1.32
SMAD5-205ENST00000509297 NEXMIFQ5QGS0 1516 aa23.28■■□□□ 1.32
SMAD5-205ENST00000509297 PHLPP1O60346 1717 aa23.28■■□□□ 1.32
SMAD5-205ENST00000509297 COL16A1Q07092 1604 aaPredicted RBP23.25■■□□□ 1.31
SMAD5-205ENST00000509297 METP08581 1390 aa23.25■■□□□ 1.31
SMAD5-205ENST00000509297 AHDC1Q5TGY3 1603 aaPredicted RBP23.24■■□□□ 1.31
SMAD5-205ENST00000509297 KIF1BO60333 1816 aa23.22■■□□□ 1.31
SMAD5-205ENST00000509297 TRIM52Q96A61 297 aa23.21■■□□□ 1.31
SMAD5-205ENST00000509297 RPGRIP1LQ68CZ1 1315 aa23.2■■□□□ 1.3
SMAD5-205ENST00000509297 SLC4A1APQ9BWU0 796 aaKnown RBP23.2■■□□□ 1.3
SMAD5-205ENST00000509297 SPATA31A6Q5VVP1 1343 aa23.19■■□□□ 1.3
SMAD5-205ENST00000509297 VGFO15240 615 aaPredicted RBP23.19■■□□□ 1.3
SMAD5-205ENST00000509297 BRINP3Q76B58 766 aa23.18■■□□□ 1.3
SMAD5-205ENST00000509297 ADGRL3Q9HAR2 1447 aa23.16■■□□□ 1.3
SMAD5-205ENST00000509297 POTEAQ6S8J7 498 aa23.16■■□□□ 1.3
SMAD5-205ENST00000509297 MST1RQ04912 1400 aa23.16■■□□□ 1.3
SMAD5-205ENST00000509297 PRAG1Q86YV5 1406 aa23.16■■□□□ 1.3
SMAD5-205ENST00000509297 PTCH1Q13635 1447 aa23.14■■□□□ 1.29
SMAD5-205ENST00000509297 SHPRHQ149N8 1683 aa23.13■■□□□ 1.29
SMAD5-205ENST00000509297 ASXL1Q8IXJ9 1541 aa23.13■■□□□ 1.29
SMAD5-205ENST00000509297 SETD1AO15047 1707 aaKnown RBP23.11■■□□□ 1.29
SMAD5-205ENST00000509297 SETD5Q9C0A6 1442 aa23.1■■□□□ 1.29
SMAD5-205ENST00000509297 LRP6O75581 1613 aa23.1■■□□□ 1.29
SMAD5-205ENST00000509297 ACIN1Q9UKV3 1341 aaKnown RBP23.08■■□□□ 1.29
SMAD5-205ENST00000509297 NALCNQ8IZF0 1738 aa23.08■■□□□ 1.28
SMAD5-205ENST00000509297 NHSL1Q5SYE7 1610 aa23.08■■□□□ 1.28
SMAD5-205ENST00000509297 PPLO60437 1756 aa23.07■■□□□ 1.28
SMAD5-205ENST00000509297 ROBO2Q9HCK4 1378 aa23.06■■□□□ 1.28
SMAD5-205ENST00000509297 CCDC144AA2RUR9 1427 aa23.06■■□□□ 1.28
SMAD5-205ENST00000509297 LRRC59Q96AG4 307 aaKnown RBP23.04■■□□□ 1.28
SMAD5-205ENST00000509297 SPATA31E1Q6ZUB1 1445 aa23.04■■□□□ 1.28
SMAD5-205ENST00000509297 ZNF772Q68DY9 489 aaPredicted RBP23.03■■□□□ 1.28
SMAD5-205ENST00000509297 MPHOSPH9Q99550 1183 aa23.03■■□□□ 1.28
SMAD5-205ENST00000509297 FOXD1Q16676 465 aa23.02■■□□□ 1.28
SMAD5-205ENST00000509297 MEX3CQ5U5Q3 659 aaKnown RBP23.02■■□□□ 1.28
SMAD5-205ENST00000509297 C1orf167Q5SNV9 1468 aa23.02■■□□□ 1.28
SMAD5-205ENST00000509297 ANKRD30BQ9BXX2 1392 aa23.01■■□□□ 1.27
SMAD5-205ENST00000509297 LAMC1P11047 1609 aa23■■□□□ 1.27
SMAD5-205ENST00000509297 ADGRF5Q8IZF2 1346 aa22.97■■□□□ 1.27
SMAD5-205ENST00000509297 PNPLA6Q8IY17 1366 aa22.96■■□□□ 1.27
SMAD5-205ENST00000509297 TECPR2O15040 1411 aa22.96■■□□□ 1.27
SMAD5-205ENST00000509297 IFT172Q9UG01 1749 aa22.94■■□□□ 1.26
SMAD5-205ENST00000509297 SOS2Q07890 1332 aaPredicted RBP22.94■■□□□ 1.26
SMAD5-205ENST00000509297 CDC42BPGQ6DT37 1551 aa22.93■■□□□ 1.26
SMAD5-205ENST00000509297 NUTM2BA6NNL0 878 aaPredicted RBP22.93■■□□□ 1.26
SMAD5-205ENST00000509297 NUTM2EB1AL46 878 aaPredicted RBP22.93■■□□□ 1.26
SMAD5-205ENST00000509297 RGL3Q3MIN7 710 aa22.93■■□□□ 1.26
SMAD5-205ENST00000509297 NUTM2AQ8IVF1 878 aaPredicted RBP22.93■■□□□ 1.26
SMAD5-205ENST00000509297 DDX17Q92841 729 aaKnown RBP22.93■■□□□ 1.26
SMAD5-205ENST00000509297 PIK3C2GO75747 1445 aa22.92■■□□□ 1.26
SMAD5-205ENST00000509297 LRPPRCP42704 1394 aaKnown RBP22.92■■□□□ 1.26
SMAD5-205ENST00000509297 ABCC11Q96J66 1382 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms