RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 BCAMP50895 628 aa16.22■□□□□ 0.19
CHD1-205ENST00000508756 TTLL12Q14166 644 aaPredicted RBP16.22■□□□□ 0.19
CHD1-205ENST00000508756 REPIN1Q9BWE0 567 aaKnown RBP16.22■□□□□ 0.19
CHD1-205ENST00000508756 LRCH3Q96II8 777 aa16.21■□□□□ 0.19
CHD1-205ENST00000508756 HDGFP51858 240 aaKnown RBP16.2■□□□□ 0.18
CHD1-205ENST00000508756 PARP9Q8IXQ6 854 aa16.2■□□□□ 0.18
CHD1-205ENST00000508756 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.2■□□□□ 0.18
CHD1-205ENST00000508756 DAXXQ9UER7 740 aaPredicted RBP16.2■□□□□ 0.18
CHD1-205ENST00000508756 RNF40O75150 1001 aa16.19■□□□□ 0.18
CHD1-205ENST00000508756 CLCN1P35523 988 aa16.19■□□□□ 0.18
CHD1-205ENST00000508756 GPCPD1Q9NPB8 672 aa16.19■□□□□ 0.18
CHD1-205ENST00000508756 SOWAHBA6NEL2 793 aa16.18■□□□□ 0.18
CHD1-205ENST00000508756 TMUB1Q9BVT8 246 aa16.18■□□□□ 0.18
CHD1-205ENST00000508756 THSD4Q6ZMP0 1018 aa16.17■□□□□ 0.18
CHD1-205ENST00000508756 RNF166Q96A37 237 aaPredicted RBP16.16■□□□□ 0.18
CHD1-205ENST00000508756 MMRN1Q13201 1228 aa16.15■□□□□ 0.18
CHD1-205ENST00000508756 GIGYF2Q6Y7W6 1299 aaKnown RBP16.14■□□□□ 0.17
CHD1-205ENST00000508756 SLF2Q8IX21 1173 aa16.14■□□□□ 0.17
CHD1-205ENST00000508756 GPBP1L1Q9HC44 474 aaPredicted RBP16.14■□□□□ 0.17
CHD1-205ENST00000508756 DDX11L8A8MPP1 907 aa16.13■□□□□ 0.17
CHD1-205ENST00000508756 HPS5Q9UPZ3 1129 aa16.13■□□□□ 0.17
CHD1-205ENST00000508756 FAM217BQ9NTX9 383 aaPredicted RBP16.11■□□□□ 0.17
CHD1-205ENST00000508756 SLC4A3P48751 1232 aa16.1■□□□□ 0.17
CHD1-205ENST00000508756 BRPF1P55201 1214 aaPredicted RBP16.1■□□□□ 0.17
CHD1-205ENST00000508756 SLC10A3P09131 477 aa16.09■□□□□ 0.17
CHD1-205ENST00000508756 PTPN5P54829 565 aa16.09■□□□□ 0.17
CHD1-205ENST00000508756 NEUROD2Q15784 382 aa16.09■□□□□ 0.17
CHD1-205ENST00000508756 RDH13Q8NBN7 331 aa16.08■□□□□ 0.16
CHD1-205ENST00000508756 TSR3Q9UJK0 312 aaKnown RBP16.08■□□□□ 0.16
CHD1-205ENST00000508756 SSTR3P32745 418 aaPredicted RBP16.07■□□□□ 0.16
CHD1-205ENST00000508756 SULF1Q8IWU6 871 aa16.07■□□□□ 0.16
CHD1-205ENST00000508756 WBP1LQ9NX94 342 aa16.07■□□□□ 0.16
CHD1-205ENST00000508756 MS4A1P11836 297 aa16.06■□□□□ 0.16
CHD1-205ENST00000508756 PPP4CP60510 307 aa16.06■□□□□ 0.16
CHD1-205ENST00000508756 KDM4CQ9H3R0 1056 aa16.06■□□□□ 0.16
CHD1-205ENST00000508756 CD46P15529 392 aa16.03■□□□□ 0.16
CHD1-205ENST00000508756 CFHP08603 1231 aa16.01■□□□□ 0.15
CHD1-205ENST00000508756 RSPH4AQ5TD94 716 aa16■□□□□ 0.15
CHD1-205ENST00000508756 APLP1P51693 650 aa15.98■□□□□ 0.15
CHD1-205ENST00000508756 NECTIN2Q92692 538 aa15.98■□□□□ 0.15
CHD1-205ENST00000508756 BEGAINQ9BUH8 593 aa15.96■□□□□ 0.15
CHD1-205ENST00000508756 HCSTQ9UBK5 93 aa15.96■□□□□ 0.15
CHD1-205ENST00000508756 GCGRP47871 477 aa15.95■□□□□ 0.14
CHD1-205ENST00000508756 FAM117AQ9C073 453 aa15.94■□□□□ 0.14
CHD1-205ENST00000508756 KMT5BQ4FZB7 885 aa15.93■□□□□ 0.14
CHD1-205ENST00000508756 NYAP1Q6ZVC0 841 aa15.9■□□□□ 0.14
CHD1-205ENST00000508756 PRR14Q9BWN1 585 aa15.89■□□□□ 0.13
CHD1-205ENST00000508756 ACTN4O43707 911 aaKnown RBP15.88■□□□□ 0.13
CHD1-205ENST00000508756 FUT2Q10981 343 aa15.88■□□□□ 0.13
CHD1-205ENST00000508756 KDM4AO75164 1064 aa15.87■□□□□ 0.13
CHD1-205ENST00000508756 NUTM1Q86Y26 1132 aa15.86■□□□□ 0.13
CHD1-205ENST00000508756 PLEKHG3A1L390 1219 aa15.85■□□□□ 0.13
CHD1-205ENST00000508756 IL27Q8NEV9 243 aa15.85■□□□□ 0.13
CHD1-205ENST00000508756 SPIRE2Q8WWL2 714 aa15.85■□□□□ 0.13
CHD1-205ENST00000508756 DDRGK1Q96HY6 314 aa15.85■□□□□ 0.13
CHD1-205ENST00000508756 PUS10Q3MIT2 529 aaKnown RBP15.84■□□□□ 0.13
CHD1-205ENST00000508756 TBC1D2Q9BYX2 928 aa15.83■□□□□ 0.12
CHD1-205ENST00000508756 PCDHB3Q9Y5E6 796 aa15.83■□□□□ 0.12
CHD1-205ENST00000508756 HLA-CQ95604 372 aa15.81■□□□□ 0.12
CHD1-205ENST00000508756 HOXA2O43364 376 aa15.8■□□□□ 0.12
CHD1-205ENST00000508756 ATP6V1AP38606 617 aa15.8■□□□□ 0.12
CHD1-205ENST00000508756 COPS2P61201 443 aa15.8■□□□□ 0.12
CHD1-205ENST00000508756 USP46P62068 366 aa15.8■□□□□ 0.12
CHD1-205ENST00000508756 BLOC1S3Q6QNY0 202 aa15.8■□□□□ 0.12
CHD1-205ENST00000508756 MTRQ99707 1265 aa15.78■□□□□ 0.12
CHD1-205ENST00000508756 GUCA2AQ02747 115 aa15.77■□□□□ 0.12
CHD1-205ENST00000508756 MORN1Q5T089 497 aa15.77■□□□□ 0.12
CHD1-205ENST00000508756 MOXD2PA6NHM9 499 aa15.76■□□□□ 0.11
CHD1-205ENST00000508756 NDUFV2P19404 249 aa15.76■□□□□ 0.11
CHD1-205ENST00000508756 MYSM1Q5VVJ2 828 aa15.76■□□□□ 0.11
CHD1-205ENST00000508756 TJAP1Q5JTD0 557 aa15.75■□□□□ 0.11
CHD1-205ENST00000508756 DIXDC1Q155Q3 683 aa15.74■□□□□ 0.11
CHD1-205ENST00000508756 GRIPAP1Q4V328 841 aa15.74■□□□□ 0.11
CHD1-205ENST00000508756 SLC27A5Q9Y2P5 690 aa15.73■□□□□ 0.11
CHD1-205ENST00000508756 ZNF516Q92618 1163 aa15.71■□□□□ 0.11
CHD1-205ENST00000508756 RSPH6AQ9H0K4 717 aa15.71■□□□□ 0.11
CHD1-205ENST00000508756 IL21Q9HBE4 155 aa15.71■□□□□ 0.11
CHD1-205ENST00000508756 NR1I2O75469 434 aa15.7■□□□□ 0.1
CHD1-205ENST00000508756 RSBN1LQ6PCB5 846 aaPredicted RBP15.7■□□□□ 0.1
CHD1-205ENST00000508756 SCUBE3Q8IX30 993 aa15.7■□□□□ 0.1
CHD1-205ENST00000508756 POLR3EQ9NVU0 708 aa15.7■□□□□ 0.1
CHD1-205ENST00000508756 FDX1P10109 184 aa15.69■□□□□ 0.1
CHD1-205ENST00000508756 SH3D19Q5HYK7 790 aa15.69■□□□□ 0.1
CHD1-205ENST00000508756 RIC3Q7Z5B4 369 aa15.69■□□□□ 0.1
CHD1-205ENST00000508756 PCDHGC3Q9UN70 934 aa15.69■□□□□ 0.1
CHD1-205ENST00000508756 LIMD1Q9UGP4 676 aa15.68■□□□□ 0.1
CHD1-205ENST00000508756 SPTLC1O15269 473 aa15.67■□□□□ 0.1
CHD1-205ENST00000508756 TLL1O43897 1013 aa15.67■□□□□ 0.1
CHD1-205ENST00000508756 ZPR1O75312 459 aa15.67■□□□□ 0.1
CHD1-205ENST00000508756 ITGBL1O95965 494 aaPredicted RBP15.67■□□□□ 0.1
CHD1-205ENST00000508756 CLK2P49760 499 aaKnown RBP15.65■□□□□ 0.1
CHD1-205ENST00000508756 SKIV2LQ15477 1246 aaKnown RBP15.65■□□□□ 0.1
CHD1-205ENST00000508756 PCDHB15Q9Y5E8 787 aa15.65■□□□□ 0.1
CHD1-205ENST00000508756 KCNC4Q03721 635 aa15.64■□□□□ 0.09
CHD1-205ENST00000508756 CSPP1Q1MSJ5 1256 aa15.64■□□□□ 0.09
CHD1-205ENST00000508756 RNF19BQ6ZMZ0 732 aa15.64■□□□□ 0.09
CHD1-205ENST00000508756 GJA5P36382 358 aa15.62■□□□□ 0.09
CHD1-205ENST00000508756 PROCA1Q8NCQ7 364 aaPredicted RBP15.62■□□□□ 0.09
CHD1-205ENST00000508756 NKX2-3Q8TAU0 364 aa15.62■□□□□ 0.09
CHD1-205ENST00000508756 THAP11Q96EK4 314 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms