RNA–Protein interactions for RNA: ENST00000507472.5

SSBP2-207, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 3

Gene SSBP2, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-207ENST00000507472 PROSER2Q86WR7 435 aaPredicted RBP24.2■■□□□ 1.46
SSBP2-207ENST00000507472 RBM33Q96EV2 1170 aaKnown RBP24.2■■□□□ 1.46
SSBP2-207ENST00000507472 TMEM94Q12767 1356 aa24.19■■□□□ 1.46
SSBP2-207ENST00000507472 PPP1R15AO75807 674 aaPredicted RBP24.19■■□□□ 1.46
SSBP2-207ENST00000507472 ZFYVE9O95405 1425 aa24.18■■□□□ 1.46
SSBP2-207ENST00000507472 RIMS2Q9UQ26 1411 aa24.18■■□□□ 1.46
SSBP2-207ENST00000507472 GCC2Q8IWJ2 1684 aa24.16■■□□□ 1.46
SSBP2-207ENST00000507472 PLEKHG1Q9ULL1 1385 aa24.16■■□□□ 1.46
SSBP2-207ENST00000507472 TMEM131LA2VDJ0 1609 aa24.14■■□□□ 1.46
SSBP2-207ENST00000507472 NUTM2DQ5VT03 806 aaPredicted RBP24.14■■□□□ 1.45
SSBP2-207ENST00000507472 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.14■■□□□ 1.45
SSBP2-207ENST00000507472 XIRP1Q702N8 1843 aaKnown RBP24.14■■□□□ 1.45
SSBP2-207ENST00000507472 E9PCH4 1651 aa24.14■■□□□ 1.45
SSBP2-207ENST00000507472 IQGAP3Q86VI3 1631 aa24.13■■□□□ 1.45
SSBP2-207ENST00000507472 MYO5BQ9ULV0 1848 aa24.12■■□□□ 1.45
SSBP2-207ENST00000507472 TBX22Q9Y458 520 aa24.11■■□□□ 1.45
SSBP2-207ENST00000507472 MED1Q15648 1581 aaPredicted RBP24.11■■□□□ 1.45
SSBP2-207ENST00000507472 FAM135BQ49AJ0 1406 aa24.09■■□□□ 1.45
SSBP2-207ENST00000507472 RRBP1Q9P2E9 1410 aaKnown RBP24.08■■□□□ 1.44
SSBP2-207ENST00000507472 NKTRP30414 1462 aaKnown RBP24.07■■□□□ 1.44
SSBP2-207ENST00000507472 NWD1Q149M9 1564 aa24.04■■□□□ 1.44
SSBP2-207ENST00000507472 PHF23Q9BUL5 403 aaPredicted RBP24.04■■□□□ 1.44
SSBP2-207ENST00000507472 ADAMTS13Q76LX8 1427 aa24.03■■□□□ 1.44
SSBP2-207ENST00000507472 MSH6P52701 1360 aa24.03■■□□□ 1.44
SSBP2-207ENST00000507472 SLAIN2Q9P270 581 aa24.02■■□□□ 1.44
SSBP2-207ENST00000507472 NAIPQ13075 1403 aa24■■□□□ 1.43
SSBP2-207ENST00000507472 CHD2O14647 1828 aaKnown RBP23.99■■□□□ 1.43
SSBP2-207ENST00000507472 ZNF326Q5BKZ1 582 aaKnown RBP23.98■■□□□ 1.43
SSBP2-207ENST00000507472 C14orf37Q86TY3 774 aa23.97■■□□□ 1.43
SSBP2-207ENST00000507472 PIK3R4Q99570 1358 aa23.96■■□□□ 1.43
SSBP2-207ENST00000507472 AMOTL2Q9Y2J4 779 aa23.96■■□□□ 1.43
SSBP2-207ENST00000507472 NCOA3Q9Y6Q9 1424 aa23.94■■□□□ 1.42
SSBP2-207ENST00000507472 TRIM52Q96A61 297 aa23.94■■□□□ 1.42
SSBP2-207ENST00000507472 ROBO1Q9Y6N7 1651 aa23.93■■□□□ 1.42
SSBP2-207ENST00000507472 DIP2AQ14689 1571 aa23.92■■□□□ 1.42
SSBP2-207ENST00000507472 C19orf44Q9H6X5 657 aa23.92■■□□□ 1.42
SSBP2-207ENST00000507472 SPHKAPQ2M3C7 1700 aa23.91■■□□□ 1.42
SSBP2-207ENST00000507472 RGS17Q9UGC6 210 aaPredicted RBP23.91■■□□□ 1.42
SSBP2-207ENST00000507472 PTPRUQ92729 1446 aa23.91■■□□□ 1.42
SSBP2-207ENST00000507472 HFM1A2PYH4 1435 aa23.9■■□□□ 1.42
SSBP2-207ENST00000507472 ATF3P18847 181 aa23.89■■□□□ 1.41
SSBP2-207ENST00000507472 CADPS2Q86UW7 1296 aa23.89■■□□□ 1.41
SSBP2-207ENST00000507472 TRPM2O94759 1503 aa23.88■■□□□ 1.41
SSBP2-207ENST00000507472 SLC4A1APQ9BWU0 796 aaKnown RBP23.86■■□□□ 1.41
SSBP2-207ENST00000507472 METP08581 1390 aa23.86■■□□□ 1.41
SSBP2-207ENST00000507472 CLTCL1P53675 1640 aa23.85■■□□□ 1.41
SSBP2-207ENST00000507472 SETBP1Q9Y6X0 1596 aa23.83■■□□□ 1.41
SSBP2-207ENST00000507472 NRXN3Q9Y4C0 1643 aa23.82■■□□□ 1.4
SSBP2-207ENST00000507472 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.8■■□□□ 1.4
SSBP2-207ENST00000507472 NEXMIFQ5QGS0 1516 aa23.79■■□□□ 1.4
SSBP2-207ENST00000507472 JCADQ9P266 1359 aa23.79■■□□□ 1.4
SSBP2-207ENST00000507472 VGFO15240 615 aaPredicted RBP23.79■■□□□ 1.4
SSBP2-207ENST00000507472 FOXD1Q16676 465 aa23.78■■□□□ 1.4
SSBP2-207ENST00000507472 PHLPP1O60346 1717 aa23.78■■□□□ 1.4
SSBP2-207ENST00000507472 POTEAQ6S8J7 498 aa23.77■■□□□ 1.4
SSBP2-207ENST00000507472 BRINP3Q76B58 766 aa23.76■■□□□ 1.39
SSBP2-207ENST00000507472 RPGRIP1LQ68CZ1 1315 aa23.75■■□□□ 1.39
SSBP2-207ENST00000507472 XRN1Q8IZH2 1706 aaKnown RBP23.75■■□□□ 1.39
SSBP2-207ENST00000507472 KIF1BO60333 1816 aa23.75■■□□□ 1.39
SSBP2-207ENST00000507472 DCCP43146 1447 aa23.73■■□□□ 1.39
SSBP2-207ENST00000507472 COL16A1Q07092 1604 aaPredicted RBP23.72■■□□□ 1.39
SSBP2-207ENST00000507472 MPHOSPH9Q99550 1183 aa23.7■■□□□ 1.38
SSBP2-207ENST00000507472 SPATA31A6Q5VVP1 1343 aa23.69■■□□□ 1.38
SSBP2-207ENST00000507472 MST1RQ04912 1400 aa23.68■■□□□ 1.38
SSBP2-207ENST00000507472 AHDC1Q5TGY3 1603 aaPredicted RBP23.68■■□□□ 1.38
SSBP2-207ENST00000507472 ADGRL3Q9HAR2 1447 aa23.67■■□□□ 1.38
SSBP2-207ENST00000507472 RGL3Q3MIN7 710 aa23.66■■□□□ 1.38
SSBP2-207ENST00000507472 ROBO2Q9HCK4 1378 aa23.65■■□□□ 1.38
SSBP2-207ENST00000507472 MEX3CQ5U5Q3 659 aaKnown RBP23.64■■□□□ 1.37
SSBP2-207ENST00000507472 CCDC144AA2RUR9 1427 aa23.63■■□□□ 1.37
SSBP2-207ENST00000507472 DDX17Q92841 729 aaKnown RBP23.63■■□□□ 1.37
SSBP2-207ENST00000507472 ASXL1Q8IXJ9 1541 aa23.63■■□□□ 1.37
SSBP2-207ENST00000507472 LRP6O75581 1613 aa23.62■■□□□ 1.37
SSBP2-207ENST00000507472 ADGRF5Q8IZF2 1346 aa23.62■■□□□ 1.37
SSBP2-207ENST00000507472 PTCH1Q13635 1447 aa23.61■■□□□ 1.37
SSBP2-207ENST00000507472 NUTM2BA6NNL0 878 aaPredicted RBP23.6■■□□□ 1.37
SSBP2-207ENST00000507472 NUTM2EB1AL46 878 aaPredicted RBP23.6■■□□□ 1.37
SSBP2-207ENST00000507472 NUTM2AQ8IVF1 878 aaPredicted RBP23.6■■□□□ 1.37
SSBP2-207ENST00000507472 LRRC59Q96AG4 307 aaKnown RBP23.6■■□□□ 1.37
SSBP2-207ENST00000507472 SPATA31E1Q6ZUB1 1445 aa23.59■■□□□ 1.37
SSBP2-207ENST00000507472 SETD5Q9C0A6 1442 aa23.59■■□□□ 1.37
SSBP2-207ENST00000507472 SETD1AO15047 1707 aaKnown RBP23.58■■□□□ 1.37
SSBP2-207ENST00000507472 PPLO60437 1756 aa23.57■■□□□ 1.36
SSBP2-207ENST00000507472 C1orf167Q5SNV9 1468 aa23.57■■□□□ 1.36
SSBP2-207ENST00000507472 NALCNQ8IZF0 1738 aa23.57■■□□□ 1.36
SSBP2-207ENST00000507472 ZNF772Q68DY9 489 aaPredicted RBP23.56■■□□□ 1.36
SSBP2-207ENST00000507472 ORAI2Q96SN7 254 aa23.56■■□□□ 1.36
SSBP2-207ENST00000507472 SHPRHQ149N8 1683 aa23.56■■□□□ 1.36
SSBP2-207ENST00000507472 PRAG1Q86YV5 1406 aa23.56■■□□□ 1.36
SSBP2-207ENST00000507472 ANKRD30BQ9BXX2 1392 aa23.55■■□□□ 1.36
SSBP2-207ENST00000507472 STK26Q9P289 416 aa23.55■■□□□ 1.36
SSBP2-207ENST00000507472 ACIN1Q9UKV3 1341 aaKnown RBP23.55■■□□□ 1.36
SSBP2-207ENST00000507472 TMEM132EQ6IEE7 984 aa23.52■■□□□ 1.36
SSBP2-207ENST00000507472 NHSL1Q5SYE7 1610 aa23.51■■□□□ 1.35
SSBP2-207ENST00000507472 WAPLQ7Z5K2 1190 aa23.5■■□□□ 1.35
SSBP2-207ENST00000507472 PNPLA6Q8IY17 1366 aa23.5■■□□□ 1.35
SSBP2-207ENST00000507472 AFF2P51816 1311 aa23.47■■□□□ 1.35
SSBP2-207ENST00000507472 SOS2Q07890 1332 aaPredicted RBP23.47■■□□□ 1.35
SSBP2-207ENST00000507472 LRPPRCP42704 1394 aaKnown RBP23.47■■□□□ 1.35
SSBP2-207ENST00000507472 ESCO1Q5FWF5 840 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms