RNA–Protein interactions for RNA: ENST00000505971.5

TRIO-207, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-207ENST00000505971 IQGAP3Q86VI3 1631 aa31.31■■■□□ 2.6
TRIO-207ENST00000505971 TMEM94Q12767 1356 aa31.3■■■□□ 2.6
TRIO-207ENST00000505971 NWD1Q149M9 1564 aa31.29■■■□□ 2.6
TRIO-207ENST00000505971 PLEKHG1Q9ULL1 1385 aa31.28■■■□□ 2.6
TRIO-207ENST00000505971 RIMS2Q9UQ26 1411 aa31.26■■■□□ 2.6
TRIO-207ENST00000505971 FAM135BQ49AJ0 1406 aa31.25■■■□□ 2.59
TRIO-207ENST00000505971 HDGFP51858 240 aaKnown RBP31.25■■■□□ 2.59
TRIO-207ENST00000505971 NKTRP30414 1462 aaKnown RBP31.25■■■□□ 2.59
TRIO-207ENST00000505971 PROSER2Q86WR7 435 aaPredicted RBP31.23■■■□□ 2.59
TRIO-207ENST00000505971 CHD2O14647 1828 aaKnown RBP31.22■■■□□ 2.59
TRIO-207ENST00000505971 NUP155O75694 1391 aa31.22■■■□□ 2.59
TRIO-207ENST00000505971 PPARGC1BQ86YN6 1023 aaKnown RBP31.2■■■□□ 2.59
TRIO-207ENST00000505971 TBX22Q9Y458 520 aa31.19■■■□□ 2.58
TRIO-207ENST00000505971 ITGAEP38570 1179 aa31.18■■■□□ 2.58
TRIO-207ENST00000505971 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.18■■■□□ 2.58
TRIO-207ENST00000505971 RBM33Q96EV2 1170 aaKnown RBP31.17■■■□□ 2.58
TRIO-207ENST00000505971 BCANQ96GW7 911 aa31.17■■■□□ 2.58
TRIO-207ENST00000505971 SENP3Q9H4L4 574 aaPredicted RBP31.16■■■□□ 2.58
TRIO-207ENST00000505971 PPP1R15AO75807 674 aaPredicted RBP31.15■■■□□ 2.58
TRIO-207ENST00000505971 ADAMTS13Q76LX8 1427 aa31.14■■■□□ 2.58
TRIO-207ENST00000505971 CHGAP10645 457 aaKnown RBP31.12■■■□□ 2.57
TRIO-207ENST00000505971 RRBP1Q9P2E9 1410 aaKnown RBP31.1■■■□□ 2.57
TRIO-207ENST00000505971 ROBO1Q9Y6N7 1651 aa31.09■■■□□ 2.57
TRIO-207ENST00000505971 NCOA3Q9Y6Q9 1424 aa31.08■■■□□ 2.57
TRIO-207ENST00000505971 MSH6P52701 1360 aa31.08■■■□□ 2.57
TRIO-207ENST00000505971 PIK3R4Q99570 1358 aa31.07■■■□□ 2.56
TRIO-207ENST00000505971 PHF23Q9BUL5 403 aaPredicted RBP31.07■■■□□ 2.56
TRIO-207ENST00000505971 DIP2AQ14689 1571 aa31.07■■■□□ 2.56
TRIO-207ENST00000505971 NUTM2DQ5VT03 806 aaPredicted RBP31.06■■■□□ 2.56
TRIO-207ENST00000505971 SLAIN2Q9P270 581 aa31.04■■■□□ 2.56
TRIO-207ENST00000505971 SPHKAPQ2M3C7 1700 aa31.04■■■□□ 2.56
TRIO-207ENST00000505971 RGS17Q9UGC6 210 aaPredicted RBP31.01■■■□□ 2.55
TRIO-207ENST00000505971 NAIPQ13075 1403 aa30.99■■■□□ 2.55
TRIO-207ENST00000505971 TRPM2O94759 1503 aa30.96■■■□□ 2.55
TRIO-207ENST00000505971 PTPRUQ92729 1446 aa30.96■■■□□ 2.55
TRIO-207ENST00000505971 NRXN3Q9Y4C0 1643 aa30.95■■■□□ 2.55
TRIO-207ENST00000505971 SETBP1Q9Y6X0 1596 aa30.93■■■□□ 2.54
TRIO-207ENST00000505971 C19orf44Q9H6X5 657 aa30.93■■■□□ 2.54
TRIO-207ENST00000505971 AMOTL2Q9Y2J4 779 aa30.93■■■□□ 2.54
TRIO-207ENST00000505971 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.93■■■□□ 2.54
TRIO-207ENST00000505971 PHLPP1O60346 1717 aa30.9■■■□□ 2.54
TRIO-207ENST00000505971 CLTCL1P53675 1640 aa30.89■■■□□ 2.54
TRIO-207ENST00000505971 CADPS2Q86UW7 1296 aa30.89■■■□□ 2.54
TRIO-207ENST00000505971 XRN1Q8IZH2 1706 aaKnown RBP30.87■■■□□ 2.53
TRIO-207ENST00000505971 HFM1A2PYH4 1435 aa30.86■■■□□ 2.53
TRIO-207ENST00000505971 COL16A1Q07092 1604 aaPredicted RBP30.85■■■□□ 2.53
TRIO-207ENST00000505971 NEXMIFQ5QGS0 1516 aa30.85■■■□□ 2.53
TRIO-207ENST00000505971 ZNF326Q5BKZ1 582 aaKnown RBP30.85■■■□□ 2.53
TRIO-207ENST00000505971 C14orf37Q86TY3 774 aa30.85■■■□□ 2.53
TRIO-207ENST00000505971 JCADQ9P266 1359 aa30.84■■■□□ 2.53
TRIO-207ENST00000505971 KIF1BO60333 1816 aa30.82■■■□□ 2.52
TRIO-207ENST00000505971 METP08581 1390 aa30.82■■■□□ 2.52
TRIO-207ENST00000505971 ATF3P18847 181 aa30.82■■■□□ 2.52
TRIO-207ENST00000505971 DCCP43146 1447 aa30.8■■■□□ 2.52
TRIO-207ENST00000505971 AHDC1Q5TGY3 1603 aaPredicted RBP30.79■■■□□ 2.52
TRIO-207ENST00000505971 POTEAQ6S8J7 498 aa30.78■■■□□ 2.52
TRIO-207ENST00000505971 BRINP3Q76B58 766 aa30.74■■■□□ 2.51
TRIO-207ENST00000505971 TRIM52Q96A61 297 aa30.73■■■□□ 2.51
TRIO-207ENST00000505971 SLC4A1APQ9BWU0 796 aaKnown RBP30.71■■■□□ 2.51
TRIO-207ENST00000505971 MST1RQ04912 1400 aa30.7■■■□□ 2.5
TRIO-207ENST00000505971 SPATA31A6Q5VVP1 1343 aa30.7■■■□□ 2.5
TRIO-207ENST00000505971 VGFO15240 615 aaPredicted RBP30.69■■■□□ 2.5
TRIO-207ENST00000505971 RPGRIP1LQ68CZ1 1315 aa30.69■■■□□ 2.5
TRIO-207ENST00000505971 SETD1AO15047 1707 aaKnown RBP30.68■■■□□ 2.5
TRIO-207ENST00000505971 SHPRHQ149N8 1683 aa30.68■■■□□ 2.5
TRIO-207ENST00000505971 ADGRL3Q9HAR2 1447 aa30.67■■■□□ 2.5
TRIO-207ENST00000505971 LRP6O75581 1613 aa30.66■■■□□ 2.5
TRIO-207ENST00000505971 ASXL1Q8IXJ9 1541 aa30.64■■■□□ 2.5
TRIO-207ENST00000505971 PRAG1Q86YV5 1406 aa30.63■■■□□ 2.49
TRIO-207ENST00000505971 NALCNQ8IZF0 1738 aa30.62■■■□□ 2.49
TRIO-207ENST00000505971 PPLO60437 1756 aa30.61■■■□□ 2.49
TRIO-207ENST00000505971 PTCH1Q13635 1447 aa30.61■■■□□ 2.49
TRIO-207ENST00000505971 NHSL1Q5SYE7 1610 aa30.61■■■□□ 2.49
TRIO-207ENST00000505971 SETD5Q9C0A6 1442 aa30.6■■■□□ 2.49
TRIO-207ENST00000505971 ROBO2Q9HCK4 1378 aa30.56■■■□□ 2.48
TRIO-207ENST00000505971 FOXD1Q16676 465 aa30.55■■■□□ 2.48
TRIO-207ENST00000505971 LRRC59Q96AG4 307 aaKnown RBP30.52■■■□□ 2.48
TRIO-207ENST00000505971 C1orf167Q5SNV9 1468 aa30.51■■■□□ 2.48
TRIO-207ENST00000505971 SPATA31E1Q6ZUB1 1445 aa30.51■■■□□ 2.47
TRIO-207ENST00000505971 MPHOSPH9Q99550 1183 aa30.51■■■□□ 2.47
TRIO-207ENST00000505971 ZNF772Q68DY9 489 aaPredicted RBP30.5■■■□□ 2.47
TRIO-207ENST00000505971 LAMC1P11047 1609 aa30.5■■■□□ 2.47
TRIO-207ENST00000505971 MEX3CQ5U5Q3 659 aaKnown RBP30.49■■■□□ 2.47
TRIO-207ENST00000505971 CCDC144AA2RUR9 1427 aa30.48■■■□□ 2.47
TRIO-207ENST00000505971 DDX17Q92841 729 aaKnown RBP30.47■■■□□ 2.47
TRIO-207ENST00000505971 ADGRF5Q8IZF2 1346 aa30.46■■■□□ 2.47
TRIO-207ENST00000505971 IFT172Q9UG01 1749 aa30.44■■■□□ 2.46
TRIO-207ENST00000505971 PNPLA6Q8IY17 1366 aa30.43■■■□□ 2.46
TRIO-207ENST00000505971 ANKRD30BQ9BXX2 1392 aa30.42■■■□□ 2.46
TRIO-207ENST00000505971 NUTM2BA6NNL0 878 aaPredicted RBP30.42■■■□□ 2.46
TRIO-207ENST00000505971 NUTM2EB1AL46 878 aaPredicted RBP30.42■■■□□ 2.46
TRIO-207ENST00000505971 NUTM2AQ8IVF1 878 aaPredicted RBP30.42■■■□□ 2.46
TRIO-207ENST00000505971 ORAI2Q96SN7 254 aa30.41■■■□□ 2.46
TRIO-207ENST00000505971 SOS2Q07890 1332 aaPredicted RBP30.41■■■□□ 2.46
TRIO-207ENST00000505971 ACIN1Q9UKV3 1341 aaKnown RBP30.41■■■□□ 2.46
TRIO-207ENST00000505971 RGL3Q3MIN7 710 aa30.4■■■□□ 2.46
TRIO-207ENST00000505971 TECPR2O15040 1411 aa30.39■■■□□ 2.46
TRIO-207ENST00000505971 AFF2P51816 1311 aa30.35■■■□□ 2.45
TRIO-207ENST00000505971 CDC42BPGQ6DT37 1551 aa30.35■■■□□ 2.45
TRIO-207ENST00000505971 PIK3C2GO75747 1445 aa30.34■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms