RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 PROSER2Q86WR7 435 aaPredicted RBP18.37■□□□□ 0.53
PDLIM7-214ENST00000505746 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.37■□□□□ 0.53
PDLIM7-214ENST00000505746 RIMS2Q9UQ26 1411 aa18.35■□□□□ 0.53
PDLIM7-214ENST00000505746 TMEM94Q12767 1356 aa18.35■□□□□ 0.53
PDLIM7-214ENST00000505746 PLEKHG1Q9ULL1 1385 aa18.35■□□□□ 0.53
PDLIM7-214ENST00000505746 ZFYVE9O95405 1425 aa18.34■□□□□ 0.53
PDLIM7-214ENST00000505746 SENP3Q9H4L4 574 aaPredicted RBP18.33■□□□□ 0.52
PDLIM7-214ENST00000505746 GCC2Q8IWJ2 1684 aa18.33■□□□□ 0.52
PDLIM7-214ENST00000505746 IQGAP3Q86VI3 1631 aa18.31■□□□□ 0.52
PDLIM7-214ENST00000505746 TBX22Q9Y458 520 aa18.31■□□□□ 0.52
PDLIM7-214ENST00000505746 TMEM131LA2VDJ0 1609 aa18.31■□□□□ 0.52
PDLIM7-214ENST00000505746 NKTRP30414 1462 aaKnown RBP18.3■□□□□ 0.52
PDLIM7-214ENST00000505746 RBM33Q96EV2 1170 aaKnown RBP18.29■□□□□ 0.52
PDLIM7-214ENST00000505746 FAM135BQ49AJ0 1406 aa18.29■□□□□ 0.52
PDLIM7-214ENST00000505746 RRBP1Q9P2E9 1410 aaKnown RBP18.29■□□□□ 0.52
PDLIM7-214ENST00000505746 E9PCH4 1651 aa18.28■□□□□ 0.52
PDLIM7-214ENST00000505746 PHF23Q9BUL5 403 aaPredicted RBP18.28■□□□□ 0.52
PDLIM7-214ENST00000505746 MED1Q15648 1581 aaPredicted RBP18.28■□□□□ 0.52
PDLIM7-214ENST00000505746 NUTM2DQ5VT03 806 aaPredicted RBP18.27■□□□□ 0.52
PDLIM7-214ENST00000505746 NWD1Q149M9 1564 aa18.26■□□□□ 0.51
PDLIM7-214ENST00000505746 MSH6P52701 1360 aa18.26■□□□□ 0.51
PDLIM7-214ENST00000505746 XIRP1Q702N8 1843 aaKnown RBP18.23■□□□□ 0.51
PDLIM7-214ENST00000505746 PIK3R4Q99570 1358 aa18.23■□□□□ 0.51
PDLIM7-214ENST00000505746 SLAIN2Q9P270 581 aa18.22■□□□□ 0.51
PDLIM7-214ENST00000505746 ADAMTS13Q76LX8 1427 aa18.22■□□□□ 0.51
PDLIM7-214ENST00000505746 NCOA3Q9Y6Q9 1424 aa18.22■□□□□ 0.51
PDLIM7-214ENST00000505746 ZNF326Q5BKZ1 582 aaKnown RBP18.21■□□□□ 0.51
PDLIM7-214ENST00000505746 NAIPQ13075 1403 aa18.21■□□□□ 0.51
PDLIM7-214ENST00000505746 C14orf37Q86TY3 774 aa18.2■□□□□ 0.5
PDLIM7-214ENST00000505746 MYO5BQ9ULV0 1848 aa18.19■□□□□ 0.5
PDLIM7-214ENST00000505746 DIP2AQ14689 1571 aa18.19■□□□□ 0.5
PDLIM7-214ENST00000505746 TRIM52Q96A61 297 aa18.18■□□□□ 0.5
PDLIM7-214ENST00000505746 AMOTL2Q9Y2J4 779 aa18.18■□□□□ 0.5
PDLIM7-214ENST00000505746 C19orf44Q9H6X5 657 aa18.17■□□□□ 0.5
PDLIM7-214ENST00000505746 CADPS2Q86UW7 1296 aa18.16■□□□□ 0.5
PDLIM7-214ENST00000505746 CHD2O14647 1828 aaKnown RBP18.16■□□□□ 0.5
PDLIM7-214ENST00000505746 HFM1A2PYH4 1435 aa18.15■□□□□ 0.5
PDLIM7-214ENST00000505746 TRPM2O94759 1503 aa18.15■□□□□ 0.5
PDLIM7-214ENST00000505746 ATF3P18847 181 aa18.15■□□□□ 0.5
PDLIM7-214ENST00000505746 ROBO1Q9Y6N7 1651 aa18.14■□□□□ 0.49
PDLIM7-214ENST00000505746 SPHKAPQ2M3C7 1700 aa18.12■□□□□ 0.49
PDLIM7-214ENST00000505746 SLC4A1APQ9BWU0 796 aaKnown RBP18.12■□□□□ 0.49
PDLIM7-214ENST00000505746 PTPRUQ92729 1446 aa18.11■□□□□ 0.49
PDLIM7-214ENST00000505746 SETBP1Q9Y6X0 1596 aa18.1■□□□□ 0.49
PDLIM7-214ENST00000505746 VGFO15240 615 aaPredicted RBP18.09■□□□□ 0.49
PDLIM7-214ENST00000505746 METP08581 1390 aa18.08■□□□□ 0.49
PDLIM7-214ENST00000505746 JCADQ9P266 1359 aa18.08■□□□□ 0.49
PDLIM7-214ENST00000505746 RGS17Q9UGC6 210 aaPredicted RBP18.08■□□□□ 0.48
PDLIM7-214ENST00000505746 CLTCL1P53675 1640 aa18.08■□□□□ 0.48
PDLIM7-214ENST00000505746 RPGRIP1LQ68CZ1 1315 aa18.06■□□□□ 0.48
PDLIM7-214ENST00000505746 NEXMIFQ5QGS0 1516 aa18.05■□□□□ 0.48
PDLIM7-214ENST00000505746 DCCP43146 1447 aa18.05■□□□□ 0.48
PDLIM7-214ENST00000505746 NRXN3Q9Y4C0 1643 aa18.05■□□□□ 0.48
PDLIM7-214ENST00000505746 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.03■□□□□ 0.48
PDLIM7-214ENST00000505746 PHLPP1O60346 1717 aa18.02■□□□□ 0.48
PDLIM7-214ENST00000505746 BRINP3Q76B58 766 aa18.02■□□□□ 0.48
PDLIM7-214ENST00000505746 SPATA31A6Q5VVP1 1343 aa18.01■□□□□ 0.47
PDLIM7-214ENST00000505746 XRN1Q8IZH2 1706 aaKnown RBP18.01■□□□□ 0.47
PDLIM7-214ENST00000505746 ACIN1Q9UKV3 1341 aaKnown RBP18■□□□□ 0.47
PDLIM7-214ENST00000505746 FOXD1Q16676 465 aa18■□□□□ 0.47
PDLIM7-214ENST00000505746 POTEAQ6S8J7 498 aa17.99■□□□□ 0.47
PDLIM7-214ENST00000505746 MPHOSPH9Q99550 1183 aa17.99■□□□□ 0.47
PDLIM7-214ENST00000505746 KIF1BO60333 1816 aa17.99■□□□□ 0.47
PDLIM7-214ENST00000505746 COL16A1Q07092 1604 aaPredicted RBP17.98■□□□□ 0.47
PDLIM7-214ENST00000505746 AHDC1Q5TGY3 1603 aaPredicted RBP17.98■□□□□ 0.47
PDLIM7-214ENST00000505746 ADGRL3Q9HAR2 1447 aa17.98■□□□□ 0.47
PDLIM7-214ENST00000505746 CCDC144AA2RUR9 1427 aa17.97■□□□□ 0.47
PDLIM7-214ENST00000505746 MST1RQ04912 1400 aa17.97■□□□□ 0.47
PDLIM7-214ENST00000505746 MEX3CQ5U5Q3 659 aaKnown RBP17.96■□□□□ 0.47
PDLIM7-214ENST00000505746 PTCH1Q13635 1447 aa17.95■□□□□ 0.46
PDLIM7-214ENST00000505746 LRRC59Q96AG4 307 aaKnown RBP17.94■□□□□ 0.46
PDLIM7-214ENST00000505746 ASXL1Q8IXJ9 1541 aa17.93■□□□□ 0.46
PDLIM7-214ENST00000505746 RGL3Q3MIN7 710 aa17.93■□□□□ 0.46
PDLIM7-214ENST00000505746 ROBO2Q9HCK4 1378 aa17.92■□□□□ 0.46
PDLIM7-214ENST00000505746 PRAG1Q86YV5 1406 aa17.91■□□□□ 0.46
PDLIM7-214ENST00000505746 SETD5Q9C0A6 1442 aa17.91■□□□□ 0.46
PDLIM7-214ENST00000505746 ZNF772Q68DY9 489 aaPredicted RBP17.91■□□□□ 0.46
PDLIM7-214ENST00000505746 ANKRD30BQ9BXX2 1392 aa17.91■□□□□ 0.46
PDLIM7-214ENST00000505746 ADGRF5Q8IZF2 1346 aa17.9■□□□□ 0.46
PDLIM7-214ENST00000505746 LRP6O75581 1613 aa17.9■□□□□ 0.46
PDLIM7-214ENST00000505746 NUTM2BA6NNL0 878 aaPredicted RBP17.89■□□□□ 0.45
PDLIM7-214ENST00000505746 NUTM2EB1AL46 878 aaPredicted RBP17.89■□□□□ 0.45
PDLIM7-214ENST00000505746 NUTM2AQ8IVF1 878 aaPredicted RBP17.89■□□□□ 0.45
PDLIM7-214ENST00000505746 SPATA31E1Q6ZUB1 1445 aa17.89■□□□□ 0.45
PDLIM7-214ENST00000505746 C1orf167Q5SNV9 1468 aa17.88■□□□□ 0.45
PDLIM7-214ENST00000505746 SHPRHQ149N8 1683 aa17.87■□□□□ 0.45
PDLIM7-214ENST00000505746 DDX17Q92841 729 aaKnown RBP17.87■□□□□ 0.45
PDLIM7-214ENST00000505746 PPLO60437 1756 aa17.86■□□□□ 0.45
PDLIM7-214ENST00000505746 SETD1AO15047 1707 aaKnown RBP17.85■□□□□ 0.45
PDLIM7-214ENST00000505746 NALCNQ8IZF0 1738 aa17.85■□□□□ 0.45
PDLIM7-214ENST00000505746 ORAI2Q96SN7 254 aa17.85■□□□□ 0.45
PDLIM7-214ENST00000505746 STK26Q9P289 416 aa17.85■□□□□ 0.45
PDLIM7-214ENST00000505746 LRPPRCP42704 1394 aaKnown RBP17.83■□□□□ 0.45
PDLIM7-214ENST00000505746 NHSL1Q5SYE7 1610 aa17.83■□□□□ 0.44
PDLIM7-214ENST00000505746 PNPLA6Q8IY17 1366 aa17.82■□□□□ 0.44
PDLIM7-214ENST00000505746 ABCC11Q96J66 1382 aa17.81■□□□□ 0.44
PDLIM7-214ENST00000505746 SOS2Q07890 1332 aaPredicted RBP17.81■□□□□ 0.44
PDLIM7-214ENST00000505746 RXRBP28702 533 aa17.81■□□□□ 0.44
PDLIM7-214ENST00000505746 TMEM132EQ6IEE7 984 aa17.81■□□□□ 0.44
PDLIM7-214ENST00000505746 TECPR2O15040 1411 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 162.7 ms