RNA–Protein interactions for RNA: ENST00000504211.5

UBE2D3-217, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-217ENST00000504211 PCDH10Q9P2E7 1040 aa13.14□□□□□ -0.31
UBE2D3-217ENST00000504211 ZFRQ96KR1 1074 aaKnown RBP13.12□□□□□ -0.31
UBE2D3-217ENST00000504211 FAM217BQ9NTX9 383 aaPredicted RBP13.12□□□□□ -0.31
UBE2D3-217ENST00000504211 SWT1Q5T5J6 900 aaKnown RBP13.1□□□□□ -0.31
UBE2D3-217ENST00000504211 STAC3Q96MF2 364 aa13.08□□□□□ -0.32
UBE2D3-217ENST00000504211 MS4A1P11836 297 aa13.07□□□□□ -0.32
UBE2D3-217ENST00000504211 SAMD7Q7Z3H4 446 aa13.07□□□□□ -0.32
UBE2D3-217ENST00000504211 SSTR3P32745 418 aaPredicted RBP13.06□□□□□ -0.32
UBE2D3-217ENST00000504211 SULF1Q8IWU6 871 aa13.06□□□□□ -0.32
UBE2D3-217ENST00000504211 HDGFP51858 240 aaKnown RBP13.05□□□□□ -0.32
UBE2D3-217ENST00000504211 SLF2Q8IX21 1173 aa13.04□□□□□ -0.32
UBE2D3-217ENST00000504211 ANKK1Q8NFD2 765 aa13.04□□□□□ -0.32
UBE2D3-217ENST00000504211 GOLGA8CPA6NN73 597 aa13.02□□□□□ -0.33
UBE2D3-217ENST00000504211 CD46P15529 392 aa13.02□□□□□ -0.33
UBE2D3-217ENST00000504211 DDRGK1Q96HY6 314 aa13.02□□□□□ -0.33
UBE2D3-217ENST00000504211 LRCH3Q96II8 777 aa13.02□□□□□ -0.33
UBE2D3-217ENST00000504211 DDX11L8A8MPP1 907 aa13.01□□□□□ -0.33
UBE2D3-217ENST00000504211 SLC4A3P48751 1232 aa13.01□□□□□ -0.33
UBE2D3-217ENST00000504211 FAM117AQ9C073 453 aa13.01□□□□□ -0.33
UBE2D3-217ENST00000504211 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.01□□□□□ -0.33
UBE2D3-217ENST00000504211 SOWAHBA6NEL2 793 aa13□□□□□ -0.33
UBE2D3-217ENST00000504211 WNT2BQ93097 391 aa12.99□□□□□ -0.33
UBE2D3-217ENST00000504211 PLEKHG3A1L390 1219 aa12.98□□□□□ -0.33
UBE2D3-217ENST00000504211 SLC10A3P09131 477 aa12.98□□□□□ -0.33
UBE2D3-217ENST00000504211 BEGAINQ9BUH8 593 aa12.97□□□□□ -0.33
UBE2D3-217ENST00000504211 RSPH4AQ5TD94 716 aa12.96□□□□□ -0.33
UBE2D3-217ENST00000504211 RDH13Q8NBN7 331 aa12.96□□□□□ -0.33
UBE2D3-217ENST00000504211 NECTIN2Q92692 538 aa12.96□□□□□ -0.33
UBE2D3-217ENST00000504211 BCAMP50895 628 aa12.95□□□□□ -0.34
UBE2D3-217ENST00000504211 TMEM132AQ24JP5 1023 aa12.95□□□□□ -0.34
UBE2D3-217ENST00000504211 THSD4Q6ZMP0 1018 aa12.94□□□□□ -0.34
UBE2D3-217ENST00000504211 MYT1LQ9UL68 1186 aa12.94□□□□□ -0.34
UBE2D3-217ENST00000504211 RNF40O75150 1001 aa12.93□□□□□ -0.34
UBE2D3-217ENST00000504211 GCGRP47871 477 aa12.93□□□□□ -0.34
UBE2D3-217ENST00000504211 IL27Q8NEV9 243 aa12.93□□□□□ -0.34
UBE2D3-217ENST00000504211 TSR3Q9UJK0 312 aaKnown RBP12.93□□□□□ -0.34
UBE2D3-217ENST00000504211 SPNS2Q8IVW8 549 aa12.92□□□□□ -0.34
UBE2D3-217ENST00000504211 HPS5Q9UPZ3 1129 aa12.92□□□□□ -0.34
UBE2D3-217ENST00000504211 KCTD12Q96CX2 325 aaKnown RBP12.91□□□□□ -0.34
UBE2D3-217ENST00000504211 CFHP08603 1231 aa12.9□□□□□ -0.34
UBE2D3-217ENST00000504211 DIXDC1Q155Q3 683 aa12.89□□□□□ -0.35
UBE2D3-217ENST00000504211 PPP4CP60510 307 aa12.88□□□□□ -0.35
UBE2D3-217ENST00000504211 SPIRE2Q8WWL2 714 aa12.88□□□□□ -0.35
UBE2D3-217ENST00000504211 SH3D19Q5HYK7 790 aa12.87□□□□□ -0.35
UBE2D3-217ENST00000504211 TBC1D2Q9BYX2 928 aa12.87□□□□□ -0.35
UBE2D3-217ENST00000504211 RSPH6AQ9H0K4 717 aa12.87□□□□□ -0.35
UBE2D3-217ENST00000504211 GOPCQ9HD26 462 aa12.87□□□□□ -0.35
UBE2D3-217ENST00000504211 KDM4AO75164 1064 aa12.86□□□□□ -0.35
UBE2D3-217ENST00000504211 USP46P62068 366 aa12.86□□□□□ -0.35
UBE2D3-217ENST00000504211 KMT5BQ4FZB7 885 aa12.86□□□□□ -0.35
UBE2D3-217ENST00000504211 PRR14Q9BWN1 585 aa12.86□□□□□ -0.35
UBE2D3-217ENST00000504211 NUTM1Q86Y26 1132 aa12.85□□□□□ -0.35
UBE2D3-217ENST00000504211 WBP1LQ9NX94 342 aa12.85□□□□□ -0.35
UBE2D3-217ENST00000504211 ACTN4O43707 911 aaKnown RBP12.84□□□□□ -0.35
UBE2D3-217ENST00000504211 MYSM1Q5VVJ2 828 aa12.84□□□□□ -0.35
UBE2D3-217ENST00000504211 NYAP1Q6ZVC0 841 aa12.84□□□□□ -0.35
UBE2D3-217ENST00000504211 APLP1P51693 650 aa12.82□□□□□ -0.36
UBE2D3-217ENST00000504211 RNF166Q96A37 237 aaPredicted RBP12.82□□□□□ -0.36
UBE2D3-217ENST00000504211 HOXA2O43364 376 aa12.81□□□□□ -0.36
UBE2D3-217ENST00000504211 GJA5P36382 358 aa12.81□□□□□ -0.36
UBE2D3-217ENST00000504211 FUT2Q10981 343 aa12.81□□□□□ -0.36
UBE2D3-217ENST00000504211 SKIV2LQ15477 1246 aaKnown RBP12.8□□□□□ -0.36
UBE2D3-217ENST00000504211 MOXD2PA6NHM9 499 aa12.78□□□□□ -0.36
UBE2D3-217ENST00000504211 SPTLC1O15269 473 aa12.78□□□□□ -0.36
UBE2D3-217ENST00000504211 ATP6V1AP38606 617 aa12.78□□□□□ -0.36
UBE2D3-217ENST00000504211 TUSC1Q2TAM9 212 aa12.78□□□□□ -0.36
UBE2D3-217ENST00000504211 RSBN1LQ6PCB5 846 aaPredicted RBP12.78□□□□□ -0.36
UBE2D3-217ENST00000504211 CLK2P49760 499 aaKnown RBP12.77□□□□□ -0.37
UBE2D3-217ENST00000504211 PTPN5P54829 565 aa12.77□□□□□ -0.37
UBE2D3-217ENST00000504211 GRIPAP1Q4V328 841 aa12.77□□□□□ -0.37
UBE2D3-217ENST00000504211 MMRN1Q13201 1228 aa12.76□□□□□ -0.37
UBE2D3-217ENST00000504211 RIC3Q7Z5B4 369 aa12.75□□□□□ -0.37
UBE2D3-217ENST00000504211 PCMTD1Q96MG8 357 aaPredicted RBP12.75□□□□□ -0.37
UBE2D3-217ENST00000504211 MORN1Q5T089 497 aa12.74□□□□□ -0.37
UBE2D3-217ENST00000504211 LIMD1Q9UGP4 676 aa12.74□□□□□ -0.37
UBE2D3-217ENST00000504211 NDUFV2P19404 249 aa12.73□□□□□ -0.37
UBE2D3-217ENST00000504211 HLA-CQ95604 372 aa12.73□□□□□ -0.37
UBE2D3-217ENST00000504211 POLR3EQ9NVU0 708 aa12.73□□□□□ -0.37
UBE2D3-217ENST00000504211 HCSTQ9UBK5 93 aa12.73□□□□□ -0.37
UBE2D3-217ENST00000504211 PCDHB3Q9Y5E6 796 aa12.73□□□□□ -0.37
UBE2D3-217ENST00000504211 FDX1P10109 184 aa12.72□□□□□ -0.37
UBE2D3-217ENST00000504211 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.72□□□□□ -0.37
UBE2D3-217ENST00000504211 PUS10Q3MIT2 529 aaKnown RBP12.7□□□□□ -0.38
UBE2D3-217ENST00000504211 GUCA2AQ02747 115 aa12.69□□□□□ -0.38
UBE2D3-217ENST00000504211 PROCA1Q8NCQ7 364 aaPredicted RBP12.69□□□□□ -0.38
UBE2D3-217ENST00000504211 PCDHGC3Q9UN70 934 aa12.69□□□□□ -0.38
UBE2D3-217ENST00000504211 PRPF38BQ5VTL8 546 aaKnown RBP12.68□□□□□ -0.38
UBE2D3-217ENST00000504211 BLOC1S3Q6QNY0 202 aa12.68□□□□□ -0.38
UBE2D3-217ENST00000504211 SLC27A5Q9Y2P5 690 aa12.68□□□□□ -0.38
UBE2D3-217ENST00000504211 NR1I2O75469 434 aa12.67□□□□□ -0.38
UBE2D3-217ENST00000504211 PCDHB15Q9Y5E8 787 aa12.67□□□□□ -0.38
UBE2D3-217ENST00000504211 SALL2Q9Y467 1007 aaPredicted RBP12.66□□□□□ -0.38
UBE2D3-217ENST00000504211 LILRB3O75022 631 aa12.65□□□□□ -0.38
UBE2D3-217ENST00000504211 MTRQ99707 1265 aa12.65□□□□□ -0.38
UBE2D3-217ENST00000504211 Q3C1V9 767 aa12.64□□□□□ -0.39
UBE2D3-217ENST00000504211 TJAP1Q5JTD0 557 aa12.64□□□□□ -0.39
UBE2D3-217ENST00000504211 PPP2R2DQ66LE6 453 aa12.64□□□□□ -0.39
UBE2D3-217ENST00000504211 SCUBE3Q8IX30 993 aa12.64□□□□□ -0.39
UBE2D3-217ENST00000504211 COPS2P61201 443 aa12.63□□□□□ -0.39
UBE2D3-217ENST00000504211 QPCTQ16769 361 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms