RNA–Protein interactions for RNA: ENST00000498595.5

HDLBP-247, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-247ENST00000498595 ILDR2Q71H61 639 aa21.98■■□□□ 1.11
HDLBP-247ENST00000498595 RIMS2Q9UQ26 1411 aa21.97■■□□□ 1.11
HDLBP-247ENST00000498595 PROSER2Q86WR7 435 aaPredicted RBP21.97■■□□□ 1.11
HDLBP-247ENST00000498595 SENP3Q9H4L4 574 aaPredicted RBP21.96■■□□□ 1.11
HDLBP-247ENST00000498595 PLEKHG1Q9ULL1 1385 aa21.96■■□□□ 1.11
HDLBP-247ENST00000498595 TMEM94Q12767 1356 aa21.95■■□□□ 1.1
HDLBP-247ENST00000498595 ZFYVE9O95405 1425 aa21.95■■□□□ 1.1
HDLBP-247ENST00000498595 ALKQ9UM73 1620 aa21.95■■□□□ 1.1
HDLBP-247ENST00000498595 E9PCH4 1651 aa21.95■■□□□ 1.1
HDLBP-247ENST00000498595 TMEM131LA2VDJ0 1609 aa21.94■■□□□ 1.1
HDLBP-247ENST00000498595 RRBP1Q9P2E9 1410 aaKnown RBP21.93■■□□□ 1.1
HDLBP-247ENST00000498595 NKTRP30414 1462 aaKnown RBP21.92■■□□□ 1.1
HDLBP-247ENST00000498595 SOCS7O14512 581 aa21.91■■□□□ 1.1
HDLBP-247ENST00000498595 TBX22Q9Y458 520 aa21.89■■□□□ 1.09
HDLBP-247ENST00000498595 MED1Q15648 1581 aaPredicted RBP21.88■■□□□ 1.09
HDLBP-247ENST00000498595 PHF23Q9BUL5 403 aaPredicted RBP21.88■■□□□ 1.09
HDLBP-247ENST00000498595 MSH6P52701 1360 aa21.87■■□□□ 1.09
HDLBP-247ENST00000498595 NWD1Q149M9 1564 aa21.87■■□□□ 1.09
HDLBP-247ENST00000498595 MYO5BQ9ULV0 1848 aa21.86■■□□□ 1.09
HDLBP-247ENST00000498595 NUTM2DQ5VT03 806 aaPredicted RBP21.86■■□□□ 1.09
HDLBP-247ENST00000498595 RBM33Q96EV2 1170 aaKnown RBP21.86■■□□□ 1.09
HDLBP-247ENST00000498595 FAM135BQ49AJ0 1406 aa21.85■■□□□ 1.09
HDLBP-247ENST00000498595 XIRP1Q702N8 1843 aaKnown RBP21.85■■□□□ 1.09
HDLBP-247ENST00000498595 ZNF326Q5BKZ1 582 aaKnown RBP21.84■■□□□ 1.09
HDLBP-247ENST00000498595 C14orf37Q86TY3 774 aa21.84■■□□□ 1.09
HDLBP-247ENST00000498595 NAIPQ13075 1403 aa21.83■■□□□ 1.09
HDLBP-247ENST00000498595 TRIM52Q96A61 297 aa21.82■■□□□ 1.08
HDLBP-247ENST00000498595 DIP2AQ14689 1571 aa21.82■■□□□ 1.08
HDLBP-247ENST00000498595 PIK3R4Q99570 1358 aa21.81■■□□□ 1.08
HDLBP-247ENST00000498595 SPHKAPQ2M3C7 1700 aa21.79■■□□□ 1.08
HDLBP-247ENST00000498595 ADAMTS13Q76LX8 1427 aa21.78■■□□□ 1.08
HDLBP-247ENST00000498595 NCOA3Q9Y6Q9 1424 aa21.78■■□□□ 1.08
HDLBP-247ENST00000498595 TRPM2O94759 1503 aa21.77■■□□□ 1.08
HDLBP-247ENST00000498595 SLAIN2Q9P270 581 aa21.77■■□□□ 1.08
HDLBP-247ENST00000498595 HFM1A2PYH4 1435 aa21.77■■□□□ 1.08
HDLBP-247ENST00000498595 CHD2O14647 1828 aaKnown RBP21.76■■□□□ 1.07
HDLBP-247ENST00000498595 ROBO1Q9Y6N7 1651 aa21.74■■□□□ 1.07
HDLBP-247ENST00000498595 ATF3P18847 181 aa21.73■■□□□ 1.07
HDLBP-247ENST00000498595 CADPS2Q86UW7 1296 aa21.73■■□□□ 1.07
HDLBP-247ENST00000498595 SLC4A1APQ9BWU0 796 aaKnown RBP21.73■■□□□ 1.07
HDLBP-247ENST00000498595 AMOTL2Q9Y2J4 779 aa21.73■■□□□ 1.07
HDLBP-247ENST00000498595 C19orf44Q9H6X5 657 aa21.72■■□□□ 1.07
HDLBP-247ENST00000498595 SETBP1Q9Y6X0 1596 aa21.69■■□□□ 1.06
HDLBP-247ENST00000498595 CLTCL1P53675 1640 aa21.69■■□□□ 1.06
HDLBP-247ENST00000498595 VGFO15240 615 aaPredicted RBP21.66■■□□□ 1.06
HDLBP-247ENST00000498595 PTPRUQ92729 1446 aa21.65■■□□□ 1.06
HDLBP-247ENST00000498595 NEXMIFQ5QGS0 1516 aa21.64■■□□□ 1.05
HDLBP-247ENST00000498595 KIF1BO60333 1816 aa21.64■■□□□ 1.05
HDLBP-247ENST00000498595 JCADQ9P266 1359 aa21.62■■□□□ 1.05
HDLBP-247ENST00000498595 NRXN3Q9Y4C0 1643 aa21.62■■□□□ 1.05
HDLBP-247ENST00000498595 RPGRIP1LQ68CZ1 1315 aa21.62■■□□□ 1.05
HDLBP-247ENST00000498595 METP08581 1390 aa21.61■■□□□ 1.05
HDLBP-247ENST00000498595 PHLPP1O60346 1717 aa21.61■■□□□ 1.05
HDLBP-247ENST00000498595 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.61■■□□□ 1.05
HDLBP-247ENST00000498595 DCCP43146 1447 aa21.6■■□□□ 1.05
HDLBP-247ENST00000498595 ACIN1Q9UKV3 1341 aaKnown RBP21.59■■□□□ 1.05
HDLBP-247ENST00000498595 XRN1Q8IZH2 1706 aaKnown RBP21.58■■□□□ 1.05
HDLBP-247ENST00000498595 CCDC144AA2RUR9 1427 aa21.56■■□□□ 1.04
HDLBP-247ENST00000498595 FOXD1Q16676 465 aa21.55■■□□□ 1.04
HDLBP-247ENST00000498595 BRINP3Q76B58 766 aa21.54■■□□□ 1.04
HDLBP-247ENST00000498595 MPHOSPH9Q99550 1183 aa21.54■■□□□ 1.04
HDLBP-247ENST00000498595 RGS17Q9UGC6 210 aaPredicted RBP21.53■■□□□ 1.04
HDLBP-247ENST00000498595 ADGRL3Q9HAR2 1447 aa21.53■■□□□ 1.04
HDLBP-247ENST00000498595 SPATA31A6Q5VVP1 1343 aa21.53■■□□□ 1.04
HDLBP-247ENST00000498595 COL16A1Q07092 1604 aaPredicted RBP21.52■■□□□ 1.04
HDLBP-247ENST00000498595 AHDC1Q5TGY3 1603 aaPredicted RBP21.52■■□□□ 1.04
HDLBP-247ENST00000498595 MEX3CQ5U5Q3 659 aaKnown RBP21.52■■□□□ 1.04
HDLBP-247ENST00000498595 PTCH1Q13635 1447 aa21.5■■□□□ 1.03
HDLBP-247ENST00000498595 MST1RQ04912 1400 aa21.49■■□□□ 1.03
HDLBP-247ENST00000498595 RGL3Q3MIN7 710 aa21.49■■□□□ 1.03
HDLBP-247ENST00000498595 ASXL1Q8IXJ9 1541 aa21.48■■□□□ 1.03
HDLBP-247ENST00000498595 ANKRD30BQ9BXX2 1392 aa21.47■■□□□ 1.03
HDLBP-247ENST00000498595 SETD5Q9C0A6 1442 aa21.46■■□□□ 1.03
HDLBP-247ENST00000498595 POTEAQ6S8J7 498 aa21.46■■□□□ 1.03
HDLBP-247ENST00000498595 ROBO2Q9HCK4 1378 aa21.45■■□□□ 1.02
HDLBP-247ENST00000498595 PPLO60437 1756 aa21.44■■□□□ 1.02
HDLBP-247ENST00000498595 LRRC59Q96AG4 307 aaKnown RBP21.44■■□□□ 1.02
HDLBP-247ENST00000498595 NALCNQ8IZF0 1738 aa21.43■■□□□ 1.02
HDLBP-247ENST00000498595 NUTM2BA6NNL0 878 aaPredicted RBP21.42■■□□□ 1.02
HDLBP-247ENST00000498595 NUTM2EB1AL46 878 aaPredicted RBP21.42■■□□□ 1.02
HDLBP-247ENST00000498595 SHPRHQ149N8 1683 aa21.42■■□□□ 1.02
HDLBP-247ENST00000498595 ZNF772Q68DY9 489 aaPredicted RBP21.42■■□□□ 1.02
HDLBP-247ENST00000498595 SPATA31E1Q6ZUB1 1445 aa21.42■■□□□ 1.02
HDLBP-247ENST00000498595 PRAG1Q86YV5 1406 aa21.42■■□□□ 1.02
HDLBP-247ENST00000498595 NUTM2AQ8IVF1 878 aaPredicted RBP21.42■■□□□ 1.02
HDLBP-247ENST00000498595 ADGRF5Q8IZF2 1346 aa21.42■■□□□ 1.02
HDLBP-247ENST00000498595 SETD1AO15047 1707 aaKnown RBP21.41■■□□□ 1.02
HDLBP-247ENST00000498595 C1orf167Q5SNV9 1468 aa21.4■■□□□ 1.02
HDLBP-247ENST00000498595 LRP6O75581 1613 aa21.4■■□□□ 1.02
HDLBP-247ENST00000498595 STK26Q9P289 416 aa21.39■■□□□ 1.01
HDLBP-247ENST00000498595 NHSL1Q5SYE7 1610 aa21.37■■□□□ 1.01
HDLBP-247ENST00000498595 RAB3GAP2Q9H2M9 1393 aa21.36■■□□□ 1.01
HDLBP-247ENST00000498595 DDX17Q92841 729 aaKnown RBP21.36■■□□□ 1.01
HDLBP-247ENST00000498595 LRPPRCP42704 1394 aaKnown RBP21.35■■□□□ 1.01
HDLBP-247ENST00000498595 PIK3C2GO75747 1445 aa21.33■■□□□ 1.01
HDLBP-247ENST00000498595 TMEM132EQ6IEE7 984 aa21.33■■□□□ 1.01
HDLBP-247ENST00000498595 ORAI2Q96SN7 254 aa21.33■■□□□ 1.01
HDLBP-247ENST00000498595 TECPR2O15040 1411 aa21.31■■□□□ 1
HDLBP-247ENST00000498595 ESCO1Q5FWF5 840 aa21.31■■□□□ 1
HDLBP-247ENST00000498595 IFT172Q9UG01 1749 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms