RNA–Protein interactions for RNA: ENST00000498539.1

LRCH4-210, Transcript of leucine rich repeats and calponin homology domain containing 4, humanhuman

TSL 3

Gene LRCH4, Length 819 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4-210ENST00000498539 IQGAP3Q86VI3 1631 aa24.35■■□□□ 1.49
LRCH4-210ENST00000498539 RBM33Q96EV2 1170 aaKnown RBP24.34■■□□□ 1.49
LRCH4-210ENST00000498539 SLC52A1Q9NWF4 448 aa24.32■■□□□ 1.48
LRCH4-210ENST00000498539 NKTRP30414 1462 aaKnown RBP24.32■■□□□ 1.48
LRCH4-210ENST00000498539 ROBO1Q9Y6N7 1651 aa24.31■■□□□ 1.48
LRCH4-210ENST00000498539 RIMS2Q9UQ26 1411 aa24.31■■□□□ 1.48
LRCH4-210ENST00000498539 CHD2O14647 1828 aaKnown RBP24.29■■□□□ 1.48
LRCH4-210ENST00000498539 KCNA6P17658 529 aa24.29■■□□□ 1.48
LRCH4-210ENST00000498539 ROCK1Q13464 1354 aa24.29■■□□□ 1.48
LRCH4-210ENST00000498539 PHF23Q9BUL5 403 aaPredicted RBP24.28■■□□□ 1.48
LRCH4-210ENST00000498539 PPARGC1BQ86YN6 1023 aaKnown RBP24.27■■□□□ 1.48
LRCH4-210ENST00000498539 PLEKHG1Q9ULL1 1385 aa24.27■■□□□ 1.48
LRCH4-210ENST00000498539 BCANQ96GW7 911 aa24.26■■□□□ 1.47
LRCH4-210ENST00000498539 PROSER2Q86WR7 435 aaPredicted RBP24.25■■□□□ 1.47
LRCH4-210ENST00000498539 ITGAEP38570 1179 aa24.24■■□□□ 1.47
LRCH4-210ENST00000498539 FAM135BQ49AJ0 1406 aa24.24■■□□□ 1.47
LRCH4-210ENST00000498539 PPP1R15AO75807 674 aaPredicted RBP24.22■■□□□ 1.47
LRCH4-210ENST00000498539 CHGAP10645 457 aaKnown RBP24.21■■□□□ 1.47
LRCH4-210ENST00000498539 NUTM2DQ5VT03 806 aaPredicted RBP24.2■■□□□ 1.46
LRCH4-210ENST00000498539 ADAMTS13Q76LX8 1427 aa24.19■■□□□ 1.46
LRCH4-210ENST00000498539 SPHKAPQ2M3C7 1700 aa24.19■■□□□ 1.46
LRCH4-210ENST00000498539 NUP155O75694 1391 aa24.18■■□□□ 1.46
LRCH4-210ENST00000498539 MSH6P52701 1360 aa24.17■■□□□ 1.46
LRCH4-210ENST00000498539 DIP2AQ14689 1571 aa24.17■■□□□ 1.46
LRCH4-210ENST00000498539 PHLPP1O60346 1717 aa24.17■■□□□ 1.46
LRCH4-210ENST00000498539 RGS17Q9UGC6 210 aaPredicted RBP24.14■■□□□ 1.45
LRCH4-210ENST00000498539 NRXN3Q9Y4C0 1643 aa24.13■■□□□ 1.45
LRCH4-210ENST00000498539 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.12■■□□□ 1.45
LRCH4-210ENST00000498539 TRPM2O94759 1503 aa24.1■■□□□ 1.45
LRCH4-210ENST00000498539 COL16A1Q07092 1604 aaPredicted RBP24.1■■□□□ 1.45
LRCH4-210ENST00000498539 TBX22Q9Y458 520 aa24.1■■□□□ 1.45
LRCH4-210ENST00000498539 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.09■■□□□ 1.45
LRCH4-210ENST00000498539 CLTCL1P53675 1640 aa24.09■■□□□ 1.45
LRCH4-210ENST00000498539 HDGFP51858 240 aaKnown RBP24.08■■□□□ 1.45
LRCH4-210ENST00000498539 PTPRUQ92729 1446 aa24.08■■□□□ 1.44
LRCH4-210ENST00000498539 XRN1Q8IZH2 1706 aaKnown RBP24.07■■□□□ 1.44
LRCH4-210ENST00000498539 SLAIN2Q9P270 581 aa24.06■■□□□ 1.44
LRCH4-210ENST00000498539 SETBP1Q9Y6X0 1596 aa24.05■■□□□ 1.44
LRCH4-210ENST00000498539 RRBP1Q9P2E9 1410 aaKnown RBP24.04■■□□□ 1.44
LRCH4-210ENST00000498539 PIK3R4Q99570 1358 aa24.03■■□□□ 1.44
LRCH4-210ENST00000498539 C14orf37Q86TY3 774 aa24.02■■□□□ 1.44
LRCH4-210ENST00000498539 NCOA3Q9Y6Q9 1424 aa24.01■■□□□ 1.43
LRCH4-210ENST00000498539 NEXMIFQ5QGS0 1516 aa24.01■■□□□ 1.43
LRCH4-210ENST00000498539 NAIPQ13075 1403 aa24.01■■□□□ 1.43
LRCH4-210ENST00000498539 AHDC1Q5TGY3 1603 aaPredicted RBP24■■□□□ 1.43
LRCH4-210ENST00000498539 POTEAQ6S8J7 498 aa24■■□□□ 1.43
LRCH4-210ENST00000498539 SETD1AO15047 1707 aaKnown RBP24■■□□□ 1.43
LRCH4-210ENST00000498539 JCADQ9P266 1359 aa23.98■■□□□ 1.43
LRCH4-210ENST00000498539 LRP6O75581 1613 aa23.98■■□□□ 1.43
LRCH4-210ENST00000498539 KIF1BO60333 1816 aa23.98■■□□□ 1.43
LRCH4-210ENST00000498539 AMOTL2Q9Y2J4 779 aa23.97■■□□□ 1.43
LRCH4-210ENST00000498539 SHPRHQ149N8 1683 aa23.95■■□□□ 1.43
LRCH4-210ENST00000498539 METP08581 1390 aa23.95■■□□□ 1.42
LRCH4-210ENST00000498539 ZNF326Q5BKZ1 582 aaKnown RBP23.95■■□□□ 1.42
LRCH4-210ENST00000498539 NALCNQ8IZF0 1738 aa23.95■■□□□ 1.42
LRCH4-210ENST00000498539 CADPS2Q86UW7 1296 aa23.93■■□□□ 1.42
LRCH4-210ENST00000498539 C19orf44Q9H6X5 657 aa23.93■■□□□ 1.42
LRCH4-210ENST00000498539 ATF3P18847 181 aa23.92■■□□□ 1.42
LRCH4-210ENST00000498539 ASXL1Q8IXJ9 1541 aa23.91■■□□□ 1.42
LRCH4-210ENST00000498539 NHSL1Q5SYE7 1610 aa23.9■■□□□ 1.42
LRCH4-210ENST00000498539 DCCP43146 1447 aa23.9■■□□□ 1.42
LRCH4-210ENST00000498539 MST1RQ04912 1400 aa23.88■■□□□ 1.41
LRCH4-210ENST00000498539 BRINP3Q76B58 766 aa23.88■■□□□ 1.41
LRCH4-210ENST00000498539 HFM1A2PYH4 1435 aa23.87■■□□□ 1.41
LRCH4-210ENST00000498539 ADGRL3Q9HAR2 1447 aa23.85■■□□□ 1.41
LRCH4-210ENST00000498539 PPLO60437 1756 aa23.84■■□□□ 1.41
LRCH4-210ENST00000498539 SPATA31A6Q5VVP1 1343 aa23.82■■□□□ 1.4
LRCH4-210ENST00000498539 TRIM52Q96A61 297 aa23.81■■□□□ 1.4
LRCH4-210ENST00000498539 MEX3CQ5U5Q3 659 aaKnown RBP23.78■■□□□ 1.4
LRCH4-210ENST00000498539 PTCH1Q13635 1447 aa23.77■■□□□ 1.4
LRCH4-210ENST00000498539 DDX17Q92841 729 aaKnown RBP23.77■■□□□ 1.4
LRCH4-210ENST00000498539 ROBO2Q9HCK4 1378 aa23.76■■□□□ 1.39
LRCH4-210ENST00000498539 SETD5Q9C0A6 1442 aa23.76■■□□□ 1.39
LRCH4-210ENST00000498539 SLC4A1APQ9BWU0 796 aaKnown RBP23.75■■□□□ 1.39
LRCH4-210ENST00000498539 NUTM2BA6NNL0 878 aaPredicted RBP23.74■■□□□ 1.39
LRCH4-210ENST00000498539 NUTM2EB1AL46 878 aaPredicted RBP23.74■■□□□ 1.39
LRCH4-210ENST00000498539 FOXD1Q16676 465 aa23.74■■□□□ 1.39
LRCH4-210ENST00000498539 NUTM2AQ8IVF1 878 aaPredicted RBP23.74■■□□□ 1.39
LRCH4-210ENST00000498539 C1orf167Q5SNV9 1468 aa23.73■■□□□ 1.39
LRCH4-210ENST00000498539 IFT172Q9UG01 1749 aa23.73■■□□□ 1.39
LRCH4-210ENST00000498539 LAMC1P11047 1609 aa23.71■■□□□ 1.39
LRCH4-210ENST00000498539 PRAG1Q86YV5 1406 aa23.71■■□□□ 1.39
LRCH4-210ENST00000498539 PNPLA6Q8IY17 1366 aa23.69■■□□□ 1.38
LRCH4-210ENST00000498539 VGFO15240 615 aaPredicted RBP23.68■■□□□ 1.38
LRCH4-210ENST00000498539 ZNF772Q68DY9 489 aaPredicted RBP23.66■■□□□ 1.38
LRCH4-210ENST00000498539 RPGRIP1LQ68CZ1 1315 aa23.65■■□□□ 1.38
LRCH4-210ENST00000498539 AFF2P51816 1311 aa23.64■■□□□ 1.38
LRCH4-210ENST00000498539 SPATA31E1Q6ZUB1 1445 aa23.64■■□□□ 1.37
LRCH4-210ENST00000498539 CDC42BPGQ6DT37 1551 aa23.64■■□□□ 1.37
LRCH4-210ENST00000498539 CCDC144AA2RUR9 1427 aa23.63■■□□□ 1.37
LRCH4-210ENST00000498539 ADGRF5Q8IZF2 1346 aa23.62■■□□□ 1.37
LRCH4-210ENST00000498539 LRRC59Q96AG4 307 aaKnown RBP23.62■■□□□ 1.37
LRCH4-210ENST00000498539 ORAI2Q96SN7 254 aa23.62■■□□□ 1.37
LRCH4-210ENST00000498539 KNDC1Q76NI1 1749 aa23.61■■□□□ 1.37
LRCH4-210ENST00000498539 C8orf37Q96NL8 207 aa23.6■■□□□ 1.37
LRCH4-210ENST00000498539 CDK12Q9NYV4 1490 aaPredicted RBP23.57■■□□□ 1.36
LRCH4-210ENST00000498539 RXRBP28702 533 aa23.57■■□□□ 1.36
LRCH4-210ENST00000498539 RGL3Q3MIN7 710 aa23.57■■□□□ 1.36
LRCH4-210ENST00000498539 COL22A1Q8NFW1 1626 aaPredicted RBP23.57■■□□□ 1.36
LRCH4-210ENST00000498539 RGS12O14924 1447 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms