RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 SSTR3P32745 418 aaPredicted RBP10.18□□□□□ -0.78
VPS36-206ENST00000497149 PLEKHG3A1L390 1219 aa10.17□□□□□ -0.78
VPS36-206ENST00000497149 SMAPO00193 183 aa10.17□□□□□ -0.78
VPS36-206ENST00000497149 FAM217BQ9NTX9 383 aaPredicted RBP10.17□□□□□ -0.78
VPS36-206ENST00000497149 RABGEF1Q9UJ41 708 aa10.17□□□□□ -0.78
VPS36-206ENST00000497149 GTF3C3Q9Y5Q9 886 aa10.17□□□□□ -0.78
VPS36-206ENST00000497149 VPS9D1Q9Y2B5 631 aa10.16□□□□□ -0.78
VPS36-206ENST00000497149 DNAJB2P25686 324 aa10.15□□□□□ -0.78
VPS36-206ENST00000497149 TMEM134Q9H6X4 195 aa10.13□□□□□ -0.79
VPS36-206ENST00000497149 HCSTQ9UBK5 93 aa10.13□□□□□ -0.79
VPS36-206ENST00000497149 BEGAINQ9BUH8 593 aa10.11□□□□□ -0.79
VPS36-206ENST00000497149 SEPT9Q9UHD8 586 aaPredicted RBP10.1□□□□□ -0.79
VPS36-206ENST00000497149 BHMG1C9JSJ3 638 aaPredicted RBP10.09□□□□□ -0.79
VPS36-206ENST00000497149 FAM98CQ17RN3 349 aaKnown RBP10.08□□□□□ -0.8
VPS36-206ENST00000497149 SULF1Q8IWU6 871 aa10.08□□□□□ -0.8
VPS36-206ENST00000497149 GOPCQ9HD26 462 aa10.08□□□□□ -0.8
VPS36-206ENST00000497149 DDX11L8A8MPP1 907 aa10.07□□□□□ -0.8
VPS36-206ENST00000497149 LAPTM4BQ86VI4 370 aa10.07□□□□□ -0.8
VPS36-206ENST00000497149 NBPF3Q9H094 633 aa10.07□□□□□ -0.8
VPS36-206ENST00000497149 CD46P15529 392 aa10.06□□□□□ -0.8
VPS36-206ENST00000497149 RSPH6AQ9H0K4 717 aa10.06□□□□□ -0.8
VPS36-206ENST00000497149 HDGFP51858 240 aaKnown RBP10.05□□□□□ -0.8
VPS36-206ENST00000497149 SWT1Q5T5J6 900 aaKnown RBP10.05□□□□□ -0.8
VPS36-206ENST00000497149 STAC3Q96MF2 364 aa10.04□□□□□ -0.8
VPS36-206ENST00000497149 SH3D19Q5HYK7 790 aa10.03□□□□□ -0.8
VPS36-206ENST00000497149 SKIV2LQ15477 1246 aaKnown RBP10.02□□□□□ -0.81
VPS36-206ENST00000497149 RSPH4AQ5TD94 716 aa10.02□□□□□ -0.81
VPS36-206ENST00000497149 MRPL50Q8N5N7 158 aaKnown RBP10.02□□□□□ -0.81
VPS36-206ENST00000497149 DIXDC1Q155Q3 683 aa10.01□□□□□ -0.81
VPS36-206ENST00000497149 SAMD7Q7Z3H4 446 aa10.01□□□□□ -0.81
VPS36-206ENST00000497149 RDH13Q8NBN7 331 aa10.01□□□□□ -0.81
VPS36-206ENST00000497149 ZFRQ96KR1 1074 aaKnown RBP10.01□□□□□ -0.81
VPS36-206ENST00000497149 TBC1D2Q9BYX2 928 aa10.01□□□□□ -0.81
VPS36-206ENST00000497149 SPIRE2Q8WWL2 714 aa10□□□□□ -0.81
VPS36-206ENST00000497149 PCMTD1Q96MG8 357 aaPredicted RBP10□□□□□ -0.81
VPS36-206ENST00000497149 SLC10A3P09131 477 aa9.99□□□□□ -0.81
VPS36-206ENST00000497149 MYSM1Q5VVJ2 828 aa9.99□□□□□ -0.81
VPS36-206ENST00000497149 SLC4A3P48751 1232 aa9.98□□□□□ -0.81
VPS36-206ENST00000497149 NUTM1Q86Y26 1132 aa9.98□□□□□ -0.81
VPS36-206ENST00000497149 SLF2Q8IX21 1173 aa9.98□□□□□ -0.81
VPS36-206ENST00000497149 POLR3EQ9NVU0 708 aa9.98□□□□□ -0.81
VPS36-206ENST00000497149 GCGRP47871 477 aa9.97□□□□□ -0.81
VPS36-206ENST00000497149 KCTD12Q96CX2 325 aaKnown RBP9.97□□□□□ -0.81
VPS36-206ENST00000497149 PLA2G2EQ9NZK7 142 aa9.97□□□□□ -0.81
VPS36-206ENST00000497149 PROCA1Q8NCQ7 364 aaPredicted RBP9.96□□□□□ -0.82
VPS36-206ENST00000497149 KDM4AO75164 1064 aa9.95□□□□□ -0.82
VPS36-206ENST00000497149 GOLGA8CPA6NN73 597 aa9.94□□□□□ -0.82
VPS36-206ENST00000497149 THSD4Q6ZMP0 1018 aa9.94□□□□□ -0.82
VPS36-206ENST00000497149 RIC3Q7Z5B4 369 aa9.94□□□□□ -0.82
VPS36-206ENST00000497149 CLK2P49760 499 aaKnown RBP9.93□□□□□ -0.82
VPS36-206ENST00000497149 IFFO2Q5TF58 517 aa9.93□□□□□ -0.82
VPS36-206ENST00000497149 LRCH3Q96II8 777 aa9.93□□□□□ -0.82
VPS36-206ENST00000497149 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.93□□□□□ -0.82
VPS36-206ENST00000497149 ATP1B4Q9UN42 357 aaPredicted RBP9.93□□□□□ -0.82
VPS36-206ENST00000497149 MOXD2PA6NHM9 499 aa9.92□□□□□ -0.82
VPS36-206ENST00000497149 RNF40O75150 1001 aa9.92□□□□□ -0.82
VPS36-206ENST00000497149 USP46P62068 366 aa9.92□□□□□ -0.82
VPS36-206ENST00000497149 ERICH6Q7L0X2 663 aa9.92□□□□□ -0.82
VPS36-206ENST00000497149 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.92□□□□□ -0.82
VPS36-206ENST00000497149 LIMD1Q9UGP4 676 aa9.92□□□□□ -0.82
VPS36-206ENST00000497149 TIMELESSQ9UNS1 1208 aa9.92□□□□□ -0.82
VPS36-206ENST00000497149 SPTLC1O15269 473 aa9.91□□□□□ -0.82
VPS36-206ENST00000497149 ANKK1Q8NFD2 765 aa9.91□□□□□ -0.82
VPS36-206ENST00000497149 CFHP08603 1231 aa9.9□□□□□ -0.82
VPS36-206ENST00000497149 NDUFV2P19404 249 aa9.9□□□□□ -0.82
VPS36-206ENST00000497149 GJA5P36382 358 aa9.9□□□□□ -0.82
VPS36-206ENST00000497149 RSBN1LQ6PCB5 846 aaPredicted RBP9.9□□□□□ -0.82
VPS36-206ENST00000497149 WNT2BQ93097 391 aa9.9□□□□□ -0.82
VPS36-206ENST00000497149 SOWAHBA6NEL2 793 aa9.89□□□□□ -0.83
VPS36-206ENST00000497149 TUSC1Q2TAM9 212 aa9.89□□□□□ -0.83
VPS36-206ENST00000497149 NECTIN2Q92692 538 aa9.89□□□□□ -0.83
VPS36-206ENST00000497149 HOXA2O43364 376 aa9.88□□□□□ -0.83
VPS36-206ENST00000497149 BCAMP50895 628 aa9.87□□□□□ -0.83
VPS36-206ENST00000497149 FUT2Q10981 343 aa9.87□□□□□ -0.83
VPS36-206ENST00000497149 C14orf37Q86TY3 774 aa9.87□□□□□ -0.83
VPS36-206ENST00000497149 PCDHB15Q9Y5E8 787 aa9.87□□□□□ -0.83
VPS36-206ENST00000497149 PPP4CP60510 307 aa9.86□□□□□ -0.83
VPS36-206ENST00000497149 KMT5BQ4FZB7 885 aa9.86□□□□□ -0.83
VPS36-206ENST00000497149 GRIPAP1Q4V328 841 aa9.85□□□□□ -0.83
VPS36-206ENST00000497149 NYAP1Q6ZVC0 841 aa9.85□□□□□ -0.83
VPS36-206ENST00000497149 TSR3Q9UJK0 312 aaKnown RBP9.85□□□□□ -0.83
VPS36-206ENST00000497149 HPS5Q9UPZ3 1129 aa9.85□□□□□ -0.83
VPS36-206ENST00000497149 RGS20O76081 388 aa9.84□□□□□ -0.83
VPS36-206ENST00000497149 FDX1P10109 184 aa9.84□□□□□ -0.83
VPS36-206ENST00000497149 ATP6V1AP38606 617 aa9.84□□□□□ -0.83
VPS36-206ENST00000497149 CSPP1Q1MSJ5 1256 aa9.84□□□□□ -0.83
VPS36-206ENST00000497149 FBXO31Q5XUX0 539 aaPredicted RBP9.84□□□□□ -0.83
VPS36-206ENST00000497149 PPP2R2DQ66LE6 453 aa9.84□□□□□ -0.83
VPS36-206ENST00000497149 HLA-CQ95604 372 aa9.84□□□□□ -0.83
VPS36-206ENST00000497149 ACTN4O43707 911 aaKnown RBP9.83□□□□□ -0.84
VPS36-206ENST00000497149 LILRB3O75022 631 aa9.83□□□□□ -0.84
VPS36-206ENST00000497149 PTPN5P54829 565 aa9.83□□□□□ -0.84
VPS36-206ENST00000497149 GUCA2AQ02747 115 aa9.83□□□□□ -0.84
VPS36-206ENST00000497149 PRR14Q9BWN1 585 aa9.83□□□□□ -0.84
VPS36-206ENST00000497149 PCDHGC3Q9UN70 934 aa9.83□□□□□ -0.84
VPS36-206ENST00000497149 RFC5P40937 340 aa9.82□□□□□ -0.84
VPS36-206ENST00000497149 QPCTQ16769 361 aa9.82□□□□□ -0.84
VPS36-206ENST00000497149 PRPF38BQ5VTL8 546 aaKnown RBP9.82□□□□□ -0.84
VPS36-206ENST00000497149 FLIIQ13045 1269 aa9.81□□□□□ -0.84
VPS36-206ENST00000497149 HRCP23327 699 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms