RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 GPIHBP1Q8IV16 184 aa10.76□□□□□ -0.69
TRIM4-205ENST00000496896 PNMA3Q9UL41 463 aa10.76□□□□□ -0.69
TRIM4-205ENST00000496896 GNPATO15228 680 aa10.74□□□□□ -0.69
TRIM4-205ENST00000496896 RNF40O75150 1001 aa10.74□□□□□ -0.69
TRIM4-205ENST00000496896 NUDT18Q6ZVK8 323 aa10.74□□□□□ -0.69
TRIM4-205ENST00000496896 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.74□□□□□ -0.69
TRIM4-205ENST00000496896 C3orf80F5H4A9 247 aa10.73□□□□□ -0.69
TRIM4-205ENST00000496896 APLP1P51693 650 aa10.73□□□□□ -0.69
TRIM4-205ENST00000496896 NKX2-3Q8TAU0 364 aa10.73□□□□□ -0.69
TRIM4-205ENST00000496896 EYA1Q99502 592 aa10.73□□□□□ -0.69
TRIM4-205ENST00000496896 ADGRG1Q9Y653 693 aa10.72□□□□□ -0.69
TRIM4-205ENST00000496896 HDGFP51858 240 aaKnown RBP10.71□□□□□ -0.69
TRIM4-205ENST00000496896 RBM46Q8TBY0 533 aaKnown RBP10.7□□□□□ -0.7
TRIM4-205ENST00000496896 NECTIN2Q92692 538 aa10.7□□□□□ -0.7
TRIM4-205ENST00000496896 TMUB1Q9BVT8 246 aa10.7□□□□□ -0.7
TRIM4-205ENST00000496896 OATP04181 439 aa10.69□□□□□ -0.7
TRIM4-205ENST00000496896 COPS2P61201 443 aa10.67□□□□□ -0.7
TRIM4-205ENST00000496896 LMOD2Q6P5Q4 547 aa10.67□□□□□ -0.7
TRIM4-205ENST00000496896 PKDCCQ504Y2 493 aa10.66□□□□□ -0.7
TRIM4-205ENST00000496896 TRIM67Q6ZTA4 783 aa10.66□□□□□ -0.7
TRIM4-205ENST00000496896 DNAJB2P25686 324 aa10.65□□□□□ -0.7
TRIM4-205ENST00000496896 FECHP22830 423 aa10.64□□□□□ -0.71
TRIM4-205ENST00000496896 MYT1Q01538 1121 aa10.64□□□□□ -0.71
TRIM4-205ENST00000496896 PXYLP1Q8TE99 480 aa10.64□□□□□ -0.71
TRIM4-205ENST00000496896 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.63□□□□□ -0.71
TRIM4-205ENST00000496896 DGAT1O75907 488 aa10.63□□□□□ -0.71
TRIM4-205ENST00000496896 METTL3Q86U44 580 aaKnown RBP10.63□□□□□ -0.71
TRIM4-205ENST00000496896 TMEM134Q9H6X4 195 aa10.63□□□□□ -0.71
TRIM4-205ENST00000496896 ZPR1O75312 459 aa10.62□□□□□ -0.71
TRIM4-205ENST00000496896 SLC19A1P41440 591 aa10.62□□□□□ -0.71
TRIM4-205ENST00000496896 MAP2K5Q13163 448 aa10.62□□□□□ -0.71
TRIM4-205ENST00000496896 RCCD1A6NED2 376 aa10.61□□□□□ -0.71
TRIM4-205ENST00000496896 SLC4A3P48751 1232 aa10.61□□□□□ -0.71
TRIM4-205ENST00000496896 SLF2Q8IX21 1173 aa10.61□□□□□ -0.71
TRIM4-205ENST00000496896 BCANQ96GW7 911 aa10.61□□□□□ -0.71
TRIM4-205ENST00000496896 FAM161AQ3B820 660 aa10.6□□□□□ -0.71
TRIM4-205ENST00000496896 SWT1Q5T5J6 900 aaKnown RBP10.6□□□□□ -0.71
TRIM4-205ENST00000496896 MINK1Q8N4C8 1332 aaPredicted RBP10.59□□□□□ -0.71
TRIM4-205ENST00000496896 POTECB2RU33 542 aa10.59□□□□□ -0.71
TRIM4-205ENST00000496896 PRR20EP86478 221 aa10.59□□□□□ -0.71
TRIM4-205ENST00000496896 PRR20CP86479 221 aa10.59□□□□□ -0.71
TRIM4-205ENST00000496896 PRR20DP86480 221 aa10.59□□□□□ -0.71
TRIM4-205ENST00000496896 PRR20BP86481 221 aa10.59□□□□□ -0.71
TRIM4-205ENST00000496896 PRR20AP86496 221 aa10.59□□□□□ -0.71
TRIM4-205ENST00000496896 RNF223E7ERA6 249 aa10.58□□□□□ -0.72
TRIM4-205ENST00000496896 IRF6O14896 467 aa10.57□□□□□ -0.72
TRIM4-205ENST00000496896 SPRYD7Q5W111 196 aa10.57□□□□□ -0.72
TRIM4-205ENST00000496896 ZNF598Q86UK7 904 aaKnown RBP10.57□□□□□ -0.72
TRIM4-205ENST00000496896 ZMYND10O75800 440 aa10.56□□□□□ -0.72
TRIM4-205ENST00000496896 ZC3H15Q8WU90 426 aaKnown RBP10.56□□□□□ -0.72
TRIM4-205ENST00000496896 EMID1Q96A84 441 aaPredicted RBP10.56□□□□□ -0.72
TRIM4-205ENST00000496896 PRR14Q9BWN1 585 aa10.56□□□□□ -0.72
TRIM4-205ENST00000496896 TREML4Q6UXN2 200 aa10.55□□□□□ -0.72
TRIM4-205ENST00000496896 FAM187AA6NFU0 413 aa10.54□□□□□ -0.72
TRIM4-205ENST00000496896 BARGINQ6ZT62 677 aa10.54□□□□□ -0.72
TRIM4-205ENST00000496896 PCDHB3Q9Y5E6 796 aa10.54□□□□□ -0.72
TRIM4-205ENST00000496896 DAXXQ9UER7 740 aaPredicted RBP10.53□□□□□ -0.72
TRIM4-205ENST00000496896 ANKLE1Q8NAG6 615 aa10.52□□□□□ -0.73
TRIM4-205ENST00000496896 PHOX2BQ99453 314 aa10.52□□□□□ -0.73
TRIM4-205ENST00000496896 LCE2AQ5TA79 106 aaPredicted RBP10.51□□□□□ -0.73
TRIM4-205ENST00000496896 ZNF697Q5TEC3 545 aa10.51□□□□□ -0.73
TRIM4-205ENST00000496896 BLOC1S3Q6QNY0 202 aa10.5□□□□□ -0.73
TRIM4-205ENST00000496896 CCDC102AQ96A19 550 aa10.5□□□□□ -0.73
TRIM4-205ENST00000496896 RSPH4AQ5TD94 716 aa10.49□□□□□ -0.73
TRIM4-205ENST00000496896 TNFRSF10AO00220 468 aa10.48□□□□□ -0.73
TRIM4-205ENST00000496896 TLL1O43897 1013 aa10.47□□□□□ -0.73
TRIM4-205ENST00000496896 GDF9O60383 454 aa10.47□□□□□ -0.73
TRIM4-205ENST00000496896 LIAT1Q6ZQX7 453 aa10.47□□□□□ -0.73
TRIM4-205ENST00000496896 SULF1Q8IWU6 871 aa10.47□□□□□ -0.73
TRIM4-205ENST00000496896 ST8SIA5O15466 376 aa10.46□□□□□ -0.73
TRIM4-205ENST00000496896 SLC10A3P09131 477 aa10.46□□□□□ -0.73
TRIM4-205ENST00000496896 KRI1Q8N9T8 703 aaKnown RBP10.46□□□□□ -0.73
TRIM4-205ENST00000496896 KMT5BQ4FZB7 885 aa10.45□□□□□ -0.74
TRIM4-205ENST00000496896 AAASQ9NRG9 546 aa10.45□□□□□ -0.74
TRIM4-205ENST00000496896 PPEF1O14829 653 aaPredicted RBP10.44□□□□□ -0.74
TRIM4-205ENST00000496896 S1PR4O95977 384 aa10.44□□□□□ -0.74
TRIM4-205ENST00000496896 ACTN4O43707 911 aaKnown RBP10.43□□□□□ -0.74
TRIM4-205ENST00000496896 CFHP08603 1231 aa10.42□□□□□ -0.74
TRIM4-205ENST00000496896 CLCN1P35523 988 aa10.41□□□□□ -0.74
TRIM4-205ENST00000496896 AMHR2Q16671 573 aa10.41□□□□□ -0.74
TRIM4-205ENST00000496896 NLRP7Q8WX94 980 aa10.41□□□□□ -0.74
TRIM4-205ENST00000496896 GPCPD1Q9NPB8 672 aa10.4□□□□□ -0.74
TRIM4-205ENST00000496896 DDX11L8A8MPP1 907 aa10.39□□□□□ -0.75
TRIM4-205ENST00000496896 WFS1O76024 890 aa10.39□□□□□ -0.75
TRIM4-205ENST00000496896 MDM2Q00987 491 aaPredicted RBP10.39□□□□□ -0.75
TRIM4-205ENST00000496896 AK7Q96M32 723 aa10.39□□□□□ -0.75
TRIM4-205ENST00000496896 STK17AQ9UEE5 414 aa10.39□□□□□ -0.75
TRIM4-205ENST00000496896 ADH1BP00325 375 aa10.38□□□□□ -0.75
TRIM4-205ENST00000496896 RDH13Q8NBN7 331 aa10.38□□□□□ -0.75
TRIM4-205ENST00000496896 GCGRP47871 477 aa10.37□□□□□ -0.75
TRIM4-205ENST00000496896 CRIPAKQ8N1N5 446 aa10.37□□□□□ -0.75
TRIM4-205ENST00000496896 CD46P15529 392 aa10.36□□□□□ -0.75
TRIM4-205ENST00000496896 FAM217BQ9NTX9 383 aaPredicted RBP10.35□□□□□ -0.75
TRIM4-205ENST00000496896 TRIM66O15016 1216 aa10.34□□□□□ -0.75
TRIM4-205ENST00000496896 PLA2G2CQ5R387 149 aa10.34□□□□□ -0.75
TRIM4-205ENST00000496896 SLC6A16Q9GZN6 736 aa10.34□□□□□ -0.75
TRIM4-205ENST00000496896 FOXC1Q12948 553 aa10.33□□□□□ -0.76
TRIM4-205ENST00000496896 PKD2L1Q9P0L9 805 aa10.33□□□□□ -0.76
TRIM4-205ENST00000496896 NR1I2O75469 434 aa10.32□□□□□ -0.76
TRIM4-205ENST00000496896 INSM1Q01101 510 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms