RNA–Protein interactions for RNA: ENST00000495777.5

SORT1-208, Transcript of sortilin 1, human

TSL 2

Gene SORT1, Length 391 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SORT1-208	ENST00000495777	PLEKHG1	Q9ULL1	1385 aa		13.66	□□□□□ -0.22
SORT1-208	ENST00000495777	PROSER2	Q86WR7	435 aa	Predicted RBP	13.65	□□□□□ -0.22
SORT1-208	ENST00000495777	FAM50A	Q14320	339 aa	Known RBP	13.64	□□□□□ -0.23
SORT1-208	ENST00000495777	RIMS2	Q9UQ26	1411 aa		13.63	□□□□□ -0.23
SORT1-208	ENST00000495777	RBM33	Q96EV2	1170 aa	Known RBP	13.62	□□□□□ -0.23
SORT1-208	ENST00000495777	ROBO1	Q9Y6N7	1651 aa		13.62	□□□□□ -0.23
SORT1-208	ENST00000495777	UNC13B	O14795	1591 aa		13.62	□□□□□ -0.23
SORT1-208	ENST00000495777	TMEM131L	A2VDJ0	1609 aa		13.61	□□□□□ -0.23
SORT1-208	ENST00000495777	MSH6	P52701	1360 aa		13.61	□□□□□ -0.23
SORT1-208	ENST00000495777	ROCK1	Q13464	1354 aa		13.61	□□□□□ -0.23
SORT1-208	ENST00000495777	TBX22	Q9Y458	520 aa		13.61	□□□□□ -0.23
SORT1-208	ENST00000495777	NCOA3	Q9Y6Q9	1424 aa		13.61	□□□□□ -0.23
SORT1-208	ENST00000495777	HDGF	P51858	240 aa	Known RBP	13.6	□□□□□ -0.23
SORT1-208	ENST00000495777	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
SORT1-208	ENST00000495777	SLAIN2	Q9P270	581 aa		13.59	□□□□□ -0.23
SORT1-208	ENST00000495777	ADAMTS13	Q76LX8	1427 aa		13.58	□□□□□ -0.24
SORT1-208	ENST00000495777	POTEA	Q6S8J7	498 aa		13.58	□□□□□ -0.24
SORT1-208	ENST00000495777	BCAN	Q96GW7	911 aa		13.58	□□□□□ -0.24
SORT1-208	ENST00000495777	GCC2	Q8IWJ2	1684 aa		13.58	□□□□□ -0.24
SORT1-208	ENST00000495777	PPP1R15A	O75807	674 aa	Predicted RBP	13.57	□□□□□ -0.24
SORT1-208	ENST00000495777	PIK3R4	Q99570	1358 aa		13.57	□□□□□ -0.24
SORT1-208	ENST00000495777	CHD2	O14647	1828 aa	Known RBP	13.56	□□□□□ -0.24
SORT1-208	ENST00000495777	DIP2A	Q14689	1571 aa		13.56	□□□□□ -0.24
SORT1-208	ENST00000495777	IQGAP3	Q86VI3	1631 aa		13.56	□□□□□ -0.24
SORT1-208	ENST00000495777	JCAD	Q9P266	1359 aa		13.56	□□□□□ -0.24
SORT1-208	ENST00000495777		E9PCH4	1651 aa		13.55	□□□□□ -0.24
SORT1-208	ENST00000495777	COL16A1	Q07092	1604 aa	Predicted RBP	13.53	□□□□□ -0.24
SORT1-208	ENST00000495777	MYO5B	Q9ULV0	1848 aa		13.53	□□□□□ -0.24
SORT1-208	ENST00000495777	CHGA	P10645	457 aa	Known RBP	13.52	□□□□□ -0.25
SORT1-208	ENST00000495777	C19orf44	Q9H6X5	657 aa		13.52	□□□□□ -0.25
SORT1-208	ENST00000495777	NUP155	O75694	1391 aa		13.52	□□□□□ -0.25
SORT1-208	ENST00000495777	PHLPP1	O60346	1717 aa		13.51	□□□□□ -0.25
SORT1-208	ENST00000495777	CADPS2	Q86UW7	1296 aa		13.51	□□□□□ -0.25
SORT1-208	ENST00000495777	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.5	□□□□□ -0.25
SORT1-208	ENST00000495777	TRPM2	O94759	1503 aa		13.5	□□□□□ -0.25
SORT1-208	ENST00000495777	PTPRU	Q92729	1446 aa		13.5	□□□□□ -0.25
SORT1-208	ENST00000495777	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.5	□□□□□ -0.25
SORT1-208	ENST00000495777	SPATA31A6	Q5VVP1	1343 aa		13.49	□□□□□ -0.25
SORT1-208	ENST00000495777	LRP6	O75581	1613 aa		13.49	□□□□□ -0.25
SORT1-208	ENST00000495777	DCC	P43146	1447 aa		13.48	□□□□□ -0.25
SORT1-208	ENST00000495777	AMOTL2	Q9Y2J4	779 aa		13.48	□□□□□ -0.25
SORT1-208	ENST00000495777	SETBP1	Q9Y6X0	1596 aa		13.48	□□□□□ -0.25
SORT1-208	ENST00000495777	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	13.47	□□□□□ -0.25
SORT1-208	ENST00000495777	ATF3	P18847	181 aa		13.47	□□□□□ -0.25
SORT1-208	ENST00000495777	C14orf37	Q86TY3	774 aa		13.47	□□□□□ -0.25
SORT1-208	ENST00000495777	NRXN3	Q9Y4C0	1643 aa		13.46	□□□□□ -0.25
SORT1-208	ENST00000495777	BRINP3	Q76B58	766 aa		13.46	□□□□□ -0.25
SORT1-208	ENST00000495777	XRN1	Q8IZH2	1706 aa	Known RBP	13.45	□□□□□ -0.26
SORT1-208	ENST00000495777	SHPRH	Q149N8	1683 aa		13.44	□□□□□ -0.26
SORT1-208	ENST00000495777	ITGAE	P38570	1179 aa		13.43	□□□□□ -0.26
SORT1-208	ENST00000495777	MST1R	Q04912	1400 aa		13.43	□□□□□ -0.26
SORT1-208	ENST00000495777	ZNF772	Q68DY9	489 aa	Predicted RBP	13.43	□□□□□ -0.26
SORT1-208	ENST00000495777	MET	P08581	1390 aa		13.43	□□□□□ -0.26
SORT1-208	ENST00000495777	SETD5	Q9C0A6	1442 aa		13.42	□□□□□ -0.26
SORT1-208	ENST00000495777	ASXL1	Q8IXJ9	1541 aa		13.42	□□□□□ -0.26
SORT1-208	ENST00000495777	SPHKAP	Q2M3C7	1700 aa		13.42	□□□□□ -0.26
SORT1-208	ENST00000495777	ADGRL3	Q9HAR2	1447 aa		13.4	□□□□□ -0.26
SORT1-208	ENST00000495777	NEXMIF	Q5QGS0	1516 aa		13.4	□□□□□ -0.26
SORT1-208	ENST00000495777	SETD1A	O15047	1707 aa	Known RBP	13.39	□□□□□ -0.27
SORT1-208	ENST00000495777	ZNF326	Q5BKZ1	582 aa	Known RBP	13.39	□□□□□ -0.27
SORT1-208	ENST00000495777	MEX3C	Q5U5Q3	659 aa	Known RBP	13.39	□□□□□ -0.27
SORT1-208	ENST00000495777	CLTCL1	P53675	1640 aa		13.39	□□□□□ -0.27
SORT1-208	ENST00000495777	NAIP	Q13075	1403 aa		13.39	□□□□□ -0.27
SORT1-208	ENST00000495777	RRBP1	Q9P2E9	1410 aa	Known RBP	13.39	□□□□□ -0.27
SORT1-208	ENST00000495777	PRAG1	Q86YV5	1406 aa		13.38	□□□□□ -0.27
SORT1-208	ENST00000495777	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.37	□□□□□ -0.27
SORT1-208	ENST00000495777	NHSL1	Q5SYE7	1610 aa		13.37	□□□□□ -0.27
SORT1-208	ENST00000495777	PPARGC1B	Q86YN6	1023 aa	Known RBP	13.36	□□□□□ -0.27
SORT1-208	ENST00000495777	PTCH1	Q13635	1447 aa		13.36	□□□□□ -0.27
SORT1-208	ENST00000495777	RXRB	P28702	533 aa		13.35	□□□□□ -0.27
SORT1-208	ENST00000495777	UPF1	Q92900	1129 aa	Known RBP eCLIP	13.35	□□□□□ -0.27
SORT1-208	ENST00000495777	LRRC59	Q96AG4	307 aa	Known RBP	13.35	□□□□□ -0.27
SORT1-208	ENST00000495777	PNPLA6	Q8IY17	1366 aa		13.34	□□□□□ -0.27
SORT1-208	ENST00000495777	AFF2	P51816	1311 aa		13.34	□□□□□ -0.27
SORT1-208	ENST00000495777	NALCN	Q8IZF0	1738 aa		13.33	□□□□□ -0.27
SORT1-208	ENST00000495777	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.33	□□□□□ -0.28
SORT1-208	ENST00000495777	NUTM2E	B1AL46	878 aa	Predicted RBP	13.33	□□□□□ -0.28
SORT1-208	ENST00000495777	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.33	□□□□□ -0.28
SORT1-208	ENST00000495777	TRIM52	Q96A61	297 aa		13.33	□□□□□ -0.28
SORT1-208	ENST00000495777	C1orf167	Q5SNV9	1468 aa		13.33	□□□□□ -0.28
SORT1-208	ENST00000495777	ROBO2	Q9HCK4	1378 aa		13.32	□□□□□ -0.28
SORT1-208	ENST00000495777	LAMC1	P11047	1609 aa		13.32	□□□□□ -0.28
SORT1-208	ENST00000495777	HFM1	A2PYH4	1435 aa		13.32	□□□□□ -0.28
SORT1-208	ENST00000495777	VGF	O15240	615 aa	Predicted RBP	13.32	□□□□□ -0.28
SORT1-208	ENST00000495777	RPGRIP1L	Q68CZ1	1315 aa		13.32	□□□□□ -0.28
SORT1-208	ENST00000495777	DDX17	Q92841	729 aa	Known RBP	13.31	□□□□□ -0.28
SORT1-208	ENST00000495777	SOS2	Q07890	1332 aa	Predicted RBP	13.3	□□□□□ -0.28
SORT1-208	ENST00000495777	C8orf37	Q96NL8	207 aa		13.28	□□□□□ -0.28
SORT1-208	ENST00000495777	RGS12	O14924	1447 aa		13.28	□□□□□ -0.28
SORT1-208	ENST00000495777	KIF1B	O60333	1816 aa		13.27	□□□□□ -0.28
SORT1-208	ENST00000495777	RBM6	P78332	1123 aa	Known RBP	13.27	□□□□□ -0.29
SORT1-208	ENST00000495777	ORAI2	Q96SN7	254 aa		13.27	□□□□□ -0.29
SORT1-208	ENST00000495777	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.26	□□□□□ -0.29
SORT1-208	ENST00000495777	QTRT2	Q9H974	415 aa	Known RBP	13.26	□□□□□ -0.29
SORT1-208	ENST00000495777	CDC42BPG	Q6DT37	1551 aa		13.24	□□□□□ -0.29
SORT1-208	ENST00000495777	TECPR2	O15040	1411 aa		13.23	□□□□□ -0.29
SORT1-208	ENST00000495777	ADAMTS2	O95450	1211 aa		13.23	□□□□□ -0.29
SORT1-208	ENST00000495777	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.23	□□□□□ -0.29
SORT1-208	ENST00000495777	NGLY1	Q96IV0	654 aa		13.23	□□□□□ -0.29
SORT1-208	ENST00000495777	MYOM2	P54296	1465 aa		13.23	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms