RNA–Protein interactions for RNA: ENST00000490416.2

NF1-214, Transcript of neurofibromin 1, humanhuman

TSL 3 BASIC

Gene NF1, Length 1,329 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-214ENST00000490416 METTL3Q86U44 580 aaKnown RBP11.47□□□□□ -0.57
NF1-214ENST00000490416 APLP1P51693 650 aa11.45□□□□□ -0.58
NF1-214ENST00000490416 PRR14Q9BWN1 585 aa11.45□□□□□ -0.58
NF1-214ENST00000490416 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.44□□□□□ -0.58
NF1-214ENST00000490416 A0A0G2JS52 829 aa11.42□□□□□ -0.58
NF1-214ENST00000490416 RSPH4AQ5TD94 716 aa11.41□□□□□ -0.58
NF1-214ENST00000490416 MTRQ99707 1265 aa11.41□□□□□ -0.58
NF1-214ENST00000490416 IL21Q9HBE4 155 aa11.41□□□□□ -0.58
NF1-214ENST00000490416 KMT5BQ4FZB7 885 aa11.4□□□□□ -0.58
NF1-214ENST00000490416 TJAP1Q5JTD0 557 aa11.4□□□□□ -0.58
NF1-214ENST00000490416 LMOD2Q6P5Q4 547 aa11.4□□□□□ -0.58
NF1-214ENST00000490416 MAP2K5Q13163 448 aa11.39□□□□□ -0.59
NF1-214ENST00000490416 DAXXQ9UER7 740 aaPredicted RBP11.38□□□□□ -0.59
NF1-214ENST00000490416 CFHP08603 1231 aa11.36□□□□□ -0.59
NF1-214ENST00000490416 PCDHB3Q9Y5E6 796 aa11.36□□□□□ -0.59
NF1-214ENST00000490416 MINK1Q8N4C8 1332 aaPredicted RBP11.36□□□□□ -0.59
NF1-214ENST00000490416 RGS20O76081 388 aa11.35□□□□□ -0.59
NF1-214ENST00000490416 SLC10A3P09131 477 aa11.35□□□□□ -0.59
NF1-214ENST00000490416 COPS2P61201 443 aa11.35□□□□□ -0.59
NF1-214ENST00000490416 IRF6O14896 467 aa11.35□□□□□ -0.59
NF1-214ENST00000490416 NLRP7Q8WX94 980 aa11.35□□□□□ -0.59
NF1-214ENST00000490416 RDH13Q8NBN7 331 aa11.34□□□□□ -0.59
NF1-214ENST00000490416 PHOX2BQ99453 314 aa11.34□□□□□ -0.59
NF1-214ENST00000490416 DDX11L8A8MPP1 907 aa11.33□□□□□ -0.6
NF1-214ENST00000490416 ACTN4O43707 911 aaKnown RBP11.33□□□□□ -0.6
NF1-214ENST00000490416 SULF1Q8IWU6 871 aa11.33□□□□□ -0.6
NF1-214ENST00000490416 ZNF516Q92618 1163 aa11.33□□□□□ -0.6
NF1-214ENST00000490416 SLC24A1O60721 1099 aa11.3□□□□□ -0.6
NF1-214ENST00000490416 BLOC1S3Q6QNY0 202 aa11.3□□□□□ -0.6
NF1-214ENST00000490416 KRI1Q8N9T8 703 aaKnown RBP11.3□□□□□ -0.6
NF1-214ENST00000490416 CCDC102AQ96A19 550 aa11.3□□□□□ -0.6
NF1-214ENST00000490416 ZPR1O75312 459 aa11.29□□□□□ -0.6
NF1-214ENST00000490416 NR1I2O75469 434 aa11.26□□□□□ -0.61
NF1-214ENST00000490416 NKX2-3Q8TAU0 364 aa11.26□□□□□ -0.61
NF1-214ENST00000490416 ZC3H15Q8WU90 426 aaKnown RBP11.26□□□□□ -0.61
NF1-214ENST00000490416 GGCXP38435 758 aa11.25□□□□□ -0.61
NF1-214ENST00000490416 MDM2Q00987 491 aaPredicted RBP11.25□□□□□ -0.61
NF1-214ENST00000490416 BARGINQ6ZT62 677 aa11.25□□□□□ -0.61
NF1-214ENST00000490416 ZMYND10O75800 440 aa11.24□□□□□ -0.61
NF1-214ENST00000490416 PPP1R18Q6NYC8 613 aa11.24□□□□□ -0.61
NF1-214ENST00000490416 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.23□□□□□ -0.61
NF1-214ENST00000490416 GCGRP47871 477 aa11.22□□□□□ -0.61
NF1-214ENST00000490416 CLCN1P35523 988 aa11.21□□□□□ -0.61
NF1-214ENST00000490416 PUS10Q3MIT2 529 aaKnown RBP11.21□□□□□ -0.61
NF1-214ENST00000490416 TLL1O43897 1013 aa11.19□□□□□ -0.62
NF1-214ENST00000490416 ATP6V1AP38606 617 aa11.19□□□□□ -0.62
NF1-214ENST00000490416 FUT2Q10981 343 aa11.19□□□□□ -0.62
NF1-214ENST00000490416 SCUBE3Q8IX30 993 aa11.19□□□□□ -0.62
NF1-214ENST00000490416 GPCPD1Q9NPB8 672 aa11.19□□□□□ -0.62
NF1-214ENST00000490416 CD46P15529 392 aa11.18□□□□□ -0.62
NF1-214ENST00000490416 GRIPAP1Q4V328 841 aa11.18□□□□□ -0.62
NF1-214ENST00000490416 TMUB1Q9BVT8 246 aa11.18□□□□□ -0.62
NF1-214ENST00000490416 ADH1BP00325 375 aa11.16□□□□□ -0.62
NF1-214ENST00000490416 MORN1Q5T089 497 aa11.16□□□□□ -0.62
NF1-214ENST00000490416 BCANQ96GW7 911 aa11.15□□□□□ -0.62
NF1-214ENST00000490416 PRKD2Q9BZL6 878 aa11.14□□□□□ -0.63
NF1-214ENST00000490416 TTLL12Q14166 644 aaPredicted RBP11.13□□□□□ -0.63
NF1-214ENST00000490416 IRX2Q9BZI1 471 aaPredicted RBP11.13□□□□□ -0.63
NF1-214ENST00000490416 FAM217BQ9NTX9 383 aaPredicted RBP11.13□□□□□ -0.63
NF1-214ENST00000490416 KDM4AO75164 1064 aa11.12□□□□□ -0.63
NF1-214ENST00000490416 SPSB2Q99619 263 aa11.12□□□□□ -0.63
NF1-214ENST00000490416 SLC6A16Q9GZN6 736 aa11.12□□□□□ -0.63
NF1-214ENST00000490416 S1PR4O95977 384 aa11.11□□□□□ -0.63
NF1-214ENST00000490416 SLC27A5Q9Y2P5 690 aa11.11□□□□□ -0.63
NF1-214ENST00000490416 RNF223E7ERA6 249 aa11.1□□□□□ -0.63
NF1-214ENST00000490416 FMNL1O95466 1100 aaPredicted RBP11.1□□□□□ -0.63
NF1-214ENST00000490416 USP46P62068 366 aa11.1□□□□□ -0.63
NF1-214ENST00000490416 AMHR2Q16671 573 aa11.1□□□□□ -0.63
NF1-214ENST00000490416 AK7Q96M32 723 aa11.1□□□□□ -0.63
NF1-214ENST00000490416 V9GY48 417 aaPredicted RBP11.1□□□□□ -0.63
NF1-214ENST00000490416 NUTM1Q86Y26 1132 aa11.09□□□□□ -0.63
NF1-214ENST00000490416 SALL2Q9Y467 1007 aaPredicted RBP11.09□□□□□ -0.63
NF1-214ENST00000490416 SSTR3P32745 418 aaPredicted RBP11.08□□□□□ -0.64
NF1-214ENST00000490416 Q3C1V9 767 aa11.08□□□□□ -0.64
NF1-214ENST00000490416 ANKLE1Q8NAG6 615 aa11.08□□□□□ -0.64
NF1-214ENST00000490416 REPIN1Q9BWE0 567 aaKnown RBP11.08□□□□□ -0.64
NF1-214ENST00000490416 THAP11Q96EK4 314 aa11.07□□□□□ -0.64
NF1-214ENST00000490416 PPEF1O14829 653 aaPredicted RBP11.06□□□□□ -0.64
NF1-214ENST00000490416 TRIM66O15016 1216 aa11.06□□□□□ -0.64
NF1-214ENST00000490416 BRICD5Q6PL45 260 aa11.05□□□□□ -0.64
NF1-214ENST00000490416 GIGYF2Q6Y7W6 1299 aaKnown RBP11.05□□□□□ -0.64
NF1-214ENST00000490416 HOXA2O43364 376 aa11.04□□□□□ -0.64
NF1-214ENST00000490416 SLC19A1P41440 591 aa11.03□□□□□ -0.64
NF1-214ENST00000490416 RNF19BQ6ZMZ0 732 aa11.02□□□□□ -0.65
NF1-214ENST00000490416 SLC24A3Q9HC58 644 aa11.02□□□□□ -0.65
NF1-214ENST00000490416 PARP9Q8IXQ6 854 aa11.01□□□□□ -0.65
NF1-214ENST00000490416 FAM160A2Q8N612 972 aaPredicted RBP11.01□□□□□ -0.65
NF1-214ENST00000490416 LAPTM4AQ15012 233 aa11□□□□□ -0.65
NF1-214ENST00000490416 MSS51Q4VC12 460 aa11□□□□□ -0.65
NF1-214ENST00000490416 HLA-CQ95604 372 aa11□□□□□ -0.65
NF1-214ENST00000490416 USB1Q9BQ65 265 aaKnown RBP10.98□□□□□ -0.65
NF1-214ENST00000490416 BEGAINQ9BUH8 593 aa10.98□□□□□ -0.65
NF1-214ENST00000490416 GFRA3O60609 400 aa10.97□□□□□ -0.65
NF1-214ENST00000490416 GUCA2AQ02747 115 aa10.97□□□□□ -0.65
NF1-214ENST00000490416 PDE4DQ08499 809 aa10.97□□□□□ -0.65
NF1-214ENST00000490416 SPIRE2Q8WWL2 714 aa10.97□□□□□ -0.65
NF1-214ENST00000490416 PRDM9Q9NQV7 894 aa10.97□□□□□ -0.65
NF1-214ENST00000490416 FCF1Q9Y324 198 aaKnown RBP10.97□□□□□ -0.65
NF1-214ENST00000490416 LIAT1Q6ZQX7 453 aa10.96□□□□□ -0.65
NF1-214ENST00000490416 FDX1P10109 184 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms