RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 FAM9BQ8IZU0 186 aa6.24□□□□□ -1.41
SNRNP40-206ENST00000489853 DDX27Q96GQ7 796 aaKnown RBP6.24□□□□□ -1.41
SNRNP40-206ENST00000489853 L3MBTL3Q96JM7 780 aaPredicted RBP6.24□□□□□ -1.41
SNRNP40-206ENST00000489853 PRDM4Q9UKN5 801 aa6.24□□□□□ -1.41
SNRNP40-206ENST00000489853 MRC2Q9UBG0 1479 aa6.23□□□□□ -1.41
SNRNP40-206ENST00000489853 SOX12O15370 315 aa6.23□□□□□ -1.41
SNRNP40-206ENST00000489853 GPIHBP1Q8IV16 184 aa6.23□□□□□ -1.41
SNRNP40-206ENST00000489853 KRI1Q8N9T8 703 aaKnown RBP6.23□□□□□ -1.41
SNRNP40-206ENST00000489853 AK7Q96M32 723 aa6.23□□□□□ -1.41
SNRNP40-206ENST00000489853 CCDC184Q52MB2 194 aa6.23□□□□□ -1.41
SNRNP40-206ENST00000489853 MRS2Q9HD23 443 aa6.23□□□□□ -1.41
SNRNP40-206ENST00000489853 FRAT2O75474 233 aaPredicted RBP6.22□□□□□ -1.41
SNRNP40-206ENST00000489853 TPM2P07951 284 aa6.22□□□□□ -1.41
SNRNP40-206ENST00000489853 SMYD5Q6GMV2 418 aa6.22□□□□□ -1.41
SNRNP40-206ENST00000489853 C1orf115Q9H7X2 142 aa6.22□□□□□ -1.41
SNRNP40-206ENST00000489853 PRKRIP1Q9H875 184 aaPredicted RBP6.22□□□□□ -1.41
SNRNP40-206ENST00000489853 FHAD1B1AJZ9 1412 aa6.22□□□□□ -1.41
SNRNP40-206ENST00000489853 AKNAQ7Z591 1439 aa6.22□□□□□ -1.41
SNRNP40-206ENST00000489853 PDIA4P13667 645 aaKnown RBP6.21□□□□□ -1.42
SNRNP40-206ENST00000489853 CAMK2BQ13554 666 aa6.21□□□□□ -1.42
SNRNP40-206ENST00000489853 ARID3CA6NKF2 412 aa6.2□□□□□ -1.42
SNRNP40-206ENST00000489853 TRIM66O15016 1216 aa6.2□□□□□ -1.42
SNRNP40-206ENST00000489853 PDE4DQ08499 809 aa6.2□□□□□ -1.42
SNRNP40-206ENST00000489853 TONSLQ96HA7 1378 aa6.2□□□□□ -1.42
SNRNP40-206ENST00000489853 POTEB3A0JP26 581 aa6.19□□□□□ -1.42
SNRNP40-206ENST00000489853 POTEBQ6S5H4 581 aa6.19□□□□□ -1.42
SNRNP40-206ENST00000489853 FAM117AQ9C073 453 aa6.19□□□□□ -1.42
SNRNP40-206ENST00000489853 CNTLNQ9NXG0 1405 aa6.19□□□□□ -1.42
SNRNP40-206ENST00000489853 NCOA2Q15596 1464 aa6.19□□□□□ -1.42
SNRNP40-206ENST00000489853 DPYSL4O14531 572 aa6.19□□□□□ -1.42
SNRNP40-206ENST00000489853 ARIH1Q9Y4X5 557 aaPredicted RBP6.19□□□□□ -1.42
SNRNP40-206ENST00000489853 RIMBP3CA6NJZ7 1639 aa6.18□□□□□ -1.42
SNRNP40-206ENST00000489853 RIMBP3BA6NNM3 1639 aa6.18□□□□□ -1.42
SNRNP40-206ENST00000489853 RIMBP3Q9UFD9 1639 aa6.18□□□□□ -1.42
SNRNP40-206ENST00000489853 RAPGEF2Q9Y4G8 1499 aa6.18□□□□□ -1.42
SNRNP40-206ENST00000489853 URB2Q14146 1524 aaKnown RBP6.18□□□□□ -1.42
SNRNP40-206ENST00000489853 EMP3P54852 163 aa6.18□□□□□ -1.42
SNRNP40-206ENST00000489853 EMILIN3Q9NT22 766 aa6.18□□□□□ -1.42
SNRNP40-206ENST00000489853 HSPA5P11021 654 aaKnown RBP6.17□□□□□ -1.42
SNRNP40-206ENST00000489853 SLC4A3P48751 1232 aa6.17□□□□□ -1.42
SNRNP40-206ENST00000489853 MAP7D2Q96T17 732 aa6.17□□□□□ -1.42
SNRNP40-206ENST00000489853 BOLA1Q9Y3E2 137 aa6.17□□□□□ -1.42
SNRNP40-206ENST00000489853 ARAP1Q96P48 1450 aa6.17□□□□□ -1.42
SNRNP40-206ENST00000489853 TOP2AP11388 1531 aaKnown RBP6.17□□□□□ -1.42
SNRNP40-206ENST00000489853 NCLP19338 710 aaKnown RBP6.17□□□□□ -1.42
SNRNP40-206ENST00000489853 RGS3P49796 1198 aa6.17□□□□□ -1.42
SNRNP40-206ENST00000489853 EXOC6Q8TAG9 804 aa6.17□□□□□ -1.42
SNRNP40-206ENST00000489853 HS3ST6Q96QI5 342 aa6.17□□□□□ -1.42
SNRNP40-206ENST00000489853 FANCD2Q9BXW9 1451 aa6.17□□□□□ -1.42
SNRNP40-206ENST00000489853 ZNF608Q9ULD9 1512 aaPredicted RBP6.16□□□□□ -1.42
SNRNP40-206ENST00000489853 SYNJ1O43426 1573 aa6.16□□□□□ -1.42
SNRNP40-206ENST00000489853 FSD2A1L4K1 749 aa6.16□□□□□ -1.42
SNRNP40-206ENST00000489853 GOLGA6L3A6NEY3 463 aa6.16□□□□□ -1.42
SNRNP40-206ENST00000489853 FAM205CA6NFA0 338 aa6.16□□□□□ -1.42
SNRNP40-206ENST00000489853 GPR37O15354 613 aa6.16□□□□□ -1.42
SNRNP40-206ENST00000489853 XRCC6P12956 609 aaKnown RBP eCLIP6.16□□□□□ -1.42
SNRNP40-206ENST00000489853 RRP1P56182 461 aaKnown RBP6.16□□□□□ -1.42
SNRNP40-206ENST00000489853 EIF4G2P78344 907 aaKnown RBP eCLIP6.16□□□□□ -1.42
SNRNP40-206ENST00000489853 POGKQ9P215 609 aa6.16□□□□□ -1.42
SNRNP40-206ENST00000489853 RANGAP1P46060 587 aaPredicted RBP6.15□□□□□ -1.42
SNRNP40-206ENST00000489853 PPP1R15BQ5SWA1 713 aa6.15□□□□□ -1.42
SNRNP40-206ENST00000489853 KRTAP3-3Q9BYR6 98 aa6.15□□□□□ -1.42
SNRNP40-206ENST00000489853 KRTAP3-2Q9BYR7 98 aa6.15□□□□□ -1.42
SNRNP40-206ENST00000489853 CFTRP13569 1480 aa6.15□□□□□ -1.43
SNRNP40-206ENST00000489853 ARHGEF11O15085 1522 aa6.15□□□□□ -1.43
SNRNP40-206ENST00000489853 PLEKHG3A1L390 1219 aa6.15□□□□□ -1.43
SNRNP40-206ENST00000489853 ESPNB1AK53 854 aa6.15□□□□□ -1.43
SNRNP40-206ENST00000489853 HOXB3P14651 431 aaPredicted RBP6.15□□□□□ -1.43
SNRNP40-206ENST00000489853 TERF1P54274 439 aa6.15□□□□□ -1.43
SNRNP40-206ENST00000489853 SMAP1Q8IYB5 467 aaPredicted RBP6.15□□□□□ -1.43
SNRNP40-206ENST00000489853 FAM161AQ3B820 660 aa6.14□□□□□ -1.43
SNRNP40-206ENST00000489853 TAF7LQ5H9L4 462 aa6.14□□□□□ -1.43
SNRNP40-206ENST00000489853 MAP3K1Q13233 1512 aa6.14□□□□□ -1.43
SNRNP40-206ENST00000489853 CCDC7Q96M83 1385 aa6.14□□□□□ -1.43
SNRNP40-206ENST00000489853 G3V3G9 751 aa6.13□□□□□ -1.43
SNRNP40-206ENST00000489853 MRE11P49959 708 aa6.13□□□□□ -1.43
SNRNP40-206ENST00000489853 CYB5RLQ6IPT4 315 aa6.13□□□□□ -1.43
SNRNP40-206ENST00000489853 RCAN3Q9UKA8 241 aa6.13□□□□□ -1.43
SNRNP40-206ENST00000489853 ISY1Q9ULR0 285 aaKnown RBP6.13□□□□□ -1.43
SNRNP40-206ENST00000489853 NCOA1Q15788 1441 aa6.12□□□□□ -1.43
SNRNP40-206ENST00000489853 DSG2Q14126 1118 aa6.12□□□□□ -1.43
SNRNP40-206ENST00000489853 UTP14CQ5TAP6 766 aaKnown RBP6.12□□□□□ -1.43
SNRNP40-206ENST00000489853 MTERF4Q7Z6M4 381 aaKnown RBP6.12□□□□□ -1.43
SNRNP40-206ENST00000489853 ERICH3Q5RHP9 1530 aa6.12□□□□□ -1.43
SNRNP40-206ENST00000489853 PDE3BQ13370 1112 aa6.11□□□□□ -1.43
SNRNP40-206ENST00000489853 MYH16Q9H6N6 1097 aa6.11□□□□□ -1.43
SNRNP40-206ENST00000489853 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.11□□□□□ -1.43
SNRNP40-206ENST00000489853 APBB1O00213 710 aa6.11□□□□□ -1.43
SNRNP40-206ENST00000489853 FECHP22830 423 aa6.11□□□□□ -1.43
SNRNP40-206ENST00000489853 BECN1Q14457 450 aa6.11□□□□□ -1.43
SNRNP40-206ENST00000489853 ZNF326Q5BKZ1 582 aaKnown RBP6.11□□□□□ -1.43
SNRNP40-206ENST00000489853 PNISRQ8TF01 805 aaKnown RBP6.11□□□□□ -1.43
SNRNP40-206ENST00000489853 CCDC102AQ96A19 550 aa6.11□□□□□ -1.43
SNRNP40-206ENST00000489853 GPHNQ9NQX3 736 aaPredicted RBP6.11□□□□□ -1.43
SNRNP40-206ENST00000489853 NAP1L2Q9ULW6 460 aaPredicted RBP6.11□□□□□ -1.43
SNRNP40-206ENST00000489853 FAM50AQ14320 339 aaKnown RBP6.1□□□□□ -1.43
SNRNP40-206ENST00000489853 PDIA6Q15084 440 aa6.1□□□□□ -1.43
SNRNP40-206ENST00000489853 C8orf34Q49A92 452 aa6.1□□□□□ -1.43
SNRNP40-206ENST00000489853 PARP9Q8IXQ6 854 aa6.1□□□□□ -1.43
SNRNP40-206ENST00000489853 KDM5BQ9UGL1 1544 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms