RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 BLOC1S3Q6QNY0 202 aa8.85□□□□□ -0.99
CCDC93-209ENST00000488908 KMT5BQ4FZB7 885 aa8.84□□□□□ -0.99
CCDC93-209ENST00000488908 KCNV2Q8TDN2 545 aa8.84□□□□□ -0.99
CCDC93-209ENST00000488908 TMEM134Q9H6X4 195 aa8.84□□□□□ -0.99
CCDC93-209ENST00000488908 RNF223E7ERA6 249 aa8.83□□□□□ -1
CCDC93-209ENST00000488908 SLC19A1P41440 591 aa8.83□□□□□ -1
CCDC93-209ENST00000488908 ADGRG1Q9Y653 693 aa8.83□□□□□ -1
CCDC93-209ENST00000488908 ACTN4O43707 911 aaKnown RBP8.82□□□□□ -1
CCDC93-209ENST00000488908 ZNF787Q6DD87 383 aa8.82□□□□□ -1
CCDC93-209ENST00000488908 NUTM2FA1L443 756 aa8.81□□□□□ -1
CCDC93-209ENST00000488908 TLL1O43897 1013 aa8.81□□□□□ -1
CCDC93-209ENST00000488908 RCCD1A6NED2 376 aa8.8□□□□□ -1
CCDC93-209ENST00000488908 ANKLE1Q8NAG6 615 aa8.8□□□□□ -1
CCDC93-209ENST00000488908 TSHZ2Q9NRE2 1034 aa8.8□□□□□ -1
CCDC93-209ENST00000488908 CFHP08603 1231 aa8.79□□□□□ -1
CCDC93-209ENST00000488908 SPRYD7Q5W111 196 aa8.78□□□□□ -1
CCDC93-209ENST00000488908 TRIM67Q6ZTA4 783 aa8.78□□□□□ -1
CCDC93-209ENST00000488908 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.77□□□□□ -1.01
CCDC93-209ENST00000488908 FCHSD2O94868 740 aa8.77□□□□□ -1.01
CCDC93-209ENST00000488908 S1PR4O95977 384 aa8.77□□□□□ -1.01
CCDC93-209ENST00000488908 FAM161AQ3B820 660 aa8.77□□□□□ -1.01
CCDC93-209ENST00000488908 PKDCCQ504Y2 493 aa8.77□□□□□ -1.01
CCDC93-209ENST00000488908 ZNF598Q86UK7 904 aaKnown RBP8.77□□□□□ -1.01
CCDC93-209ENST00000488908 EMID1Q96A84 441 aaPredicted RBP8.77□□□□□ -1.01
CCDC93-209ENST00000488908 NR1I2O75469 434 aa8.76□□□□□ -1.01
CCDC93-209ENST00000488908 ADH1BP00325 375 aa8.76□□□□□ -1.01
CCDC93-209ENST00000488908 P3H3Q8IVL6 736 aa8.76□□□□□ -1.01
CCDC93-209ENST00000488908 PPEF1O14829 653 aaPredicted RBP8.75□□□□□ -1.01
CCDC93-209ENST00000488908 PRR20EP86478 221 aa8.75□□□□□ -1.01
CCDC93-209ENST00000488908 PRR20CP86479 221 aa8.75□□□□□ -1.01
CCDC93-209ENST00000488908 PRR20DP86480 221 aa8.75□□□□□ -1.01
CCDC93-209ENST00000488908 PRR20BP86481 221 aa8.75□□□□□ -1.01
CCDC93-209ENST00000488908 PRR20AP86496 221 aa8.75□□□□□ -1.01
CCDC93-209ENST00000488908 DGAT1O75907 488 aa8.74□□□□□ -1.01
CCDC93-209ENST00000488908 OATP04181 439 aa8.74□□□□□ -1.01
CCDC93-209ENST00000488908 SLC10A3P09131 477 aa8.74□□□□□ -1.01
CCDC93-209ENST00000488908 RSPH4AQ5TD94 716 aa8.73□□□□□ -1.01
CCDC93-209ENST00000488908 ZNF697Q5TEC3 545 aa8.73□□□□□ -1.01
CCDC93-209ENST00000488908 LIAT1Q6ZQX7 453 aa8.72□□□□□ -1.01
CCDC93-209ENST00000488908 PXYLP1Q8TE99 480 aa8.72□□□□□ -1.01
CCDC93-209ENST00000488908 SLC6A16Q9GZN6 736 aa8.72□□□□□ -1.01
CCDC93-209ENST00000488908 MYT1Q01538 1121 aa8.71□□□□□ -1.02
CCDC93-209ENST00000488908 ZNF775Q96BV0 537 aaPredicted RBP8.71□□□□□ -1.02
CCDC93-209ENST00000488908 SEMA3EO15041 775 aa8.7□□□□□ -1.02
CCDC93-209ENST00000488908 SCUBE3Q8IX30 993 aa8.7□□□□□ -1.02
CCDC93-209ENST00000488908 FAM187AA6NFU0 413 aa8.69□□□□□ -1.02
CCDC93-209ENST00000488908 GDF9O60383 454 aa8.69□□□□□ -1.02
CCDC93-209ENST00000488908 HIC1Q14526 733 aa8.69□□□□□ -1.02
CCDC93-209ENST00000488908 TNFRSF10AO00220 468 aa8.68□□□□□ -1.02
CCDC93-209ENST00000488908 METTL3Q86U44 580 aaKnown RBP8.68□□□□□ -1.02
CCDC93-209ENST00000488908 PUS10Q3MIT2 529 aaKnown RBP8.67□□□□□ -1.02
CCDC93-209ENST00000488908 SPSB2Q99619 263 aa8.67□□□□□ -1.02
CCDC93-209ENST00000488908 PLA2G2CQ5R387 149 aa8.66□□□□□ -1.02
CCDC93-209ENST00000488908 SMYD5Q6GMV2 418 aa8.64□□□□□ -1.03
CCDC93-209ENST00000488908 LMOD2Q6P5Q4 547 aa8.64□□□□□ -1.03
CCDC93-209ENST00000488908 RDH13Q8NBN7 331 aa8.63□□□□□ -1.03
CCDC93-209ENST00000488908 GNPATO15228 680 aa8.62□□□□□ -1.03
CCDC93-209ENST00000488908 DAXXQ9UER7 740 aaPredicted RBP8.62□□□□□ -1.03
CCDC93-209ENST00000488908 POTECB2RU33 542 aa8.61□□□□□ -1.03
CCDC93-209ENST00000488908 RPIAP49247 311 aa8.61□□□□□ -1.03
CCDC93-209ENST00000488908 FOXC1Q12948 553 aa8.61□□□□□ -1.03
CCDC93-209ENST00000488908 MORN1Q5T089 497 aa8.61□□□□□ -1.03
CCDC93-209ENST00000488908 RBM26Q5T8P6 1007 aaKnown RBP8.61□□□□□ -1.03
CCDC93-209ENST00000488908 TESPA1A2RU30 521 aaPredicted RBP8.6□□□□□ -1.03
CCDC93-209ENST00000488908 AAASQ9NRG9 546 aa8.6□□□□□ -1.03
CCDC93-209ENST00000488908 PKD2L1Q9P0L9 805 aa8.6□□□□□ -1.03
CCDC93-209ENST00000488908 DDX11L8A8MPP1 907 aa8.59□□□□□ -1.03
CCDC93-209ENST00000488908 CD2BP2O95400 341 aaKnown RBP8.59□□□□□ -1.03
CCDC93-209ENST00000488908 ATP6V1AP38606 617 aa8.59□□□□□ -1.03
CCDC93-209ENST00000488908 FUT2Q10981 343 aa8.59□□□□□ -1.03
CCDC93-209ENST00000488908 SULF1Q8IWU6 871 aa8.59□□□□□ -1.03
CCDC93-209ENST00000488908 FCF1Q9Y324 198 aaKnown RBP8.59□□□□□ -1.03
CCDC93-209ENST00000488908 ST8SIA5O15466 376 aa8.58□□□□□ -1.04
CCDC93-209ENST00000488908 FMNL1O95466 1100 aaPredicted RBP8.58□□□□□ -1.04
CCDC93-209ENST00000488908 FECHP22830 423 aa8.58□□□□□ -1.04
CCDC93-209ENST00000488908 THAP11Q96EK4 314 aa8.58□□□□□ -1.04
CCDC93-209ENST00000488908 GCGRP47871 477 aa8.56□□□□□ -1.04
CCDC93-209ENST00000488908 SLC27A5Q9Y2P5 690 aa8.56□□□□□ -1.04
CCDC93-209ENST00000488908 SALL2Q9Y467 1007 aaPredicted RBP8.56□□□□□ -1.04
CCDC93-209ENST00000488908 GPR37O15354 613 aa8.55□□□□□ -1.04
CCDC93-209ENST00000488908 CYP4X1Q8N118 509 aa8.55□□□□□ -1.04
CCDC93-209ENST00000488908 CRIPAKQ8N1N5 446 aa8.55□□□□□ -1.04
CCDC93-209ENST00000488908 FAM160A2Q8N612 972 aaPredicted RBP8.55□□□□□ -1.04
CCDC93-209ENST00000488908 TOR4AQ9NXH8 423 aa8.55□□□□□ -1.04
CCDC93-209ENST00000488908 NLRP7Q8WX94 980 aa8.54□□□□□ -1.04
CCDC93-209ENST00000488908 ZBTB24O43167 697 aaPredicted RBP8.53□□□□□ -1.04
CCDC93-209ENST00000488908 AVPP01185 164 aa8.53□□□□□ -1.04
CCDC93-209ENST00000488908 GRIPAP1Q4V328 841 aa8.53□□□□□ -1.04
CCDC93-209ENST00000488908 CTC1Q2NKJ3 1217 aa8.52□□□□□ -1.05
CCDC93-209ENST00000488908 BRICD5Q6PL45 260 aa8.52□□□□□ -1.05
CCDC93-209ENST00000488908 TREML4Q6UXN2 200 aa8.52□□□□□ -1.05
CCDC93-209ENST00000488908 PRDM9Q9NQV7 894 aa8.52□□□□□ -1.05
CCDC93-209ENST00000488908 AXIN1O15169 862 aa8.51□□□□□ -1.05
CCDC93-209ENST00000488908 MSS51Q4VC12 460 aa8.51□□□□□ -1.05
CCDC93-209ENST00000488908 PHOX2BQ99453 314 aa8.51□□□□□ -1.05
CCDC93-209ENST00000488908 TTC24A2A3L6 582 aaPredicted RBP8.49□□□□□ -1.05
CCDC93-209ENST00000488908 RNF19BQ6ZMZ0 732 aa8.49□□□□□ -1.05
CCDC93-209ENST00000488908 GPIHBP1Q8IV16 184 aa8.49□□□□□ -1.05
CCDC93-209ENST00000488908 DACH1Q9UI36 760 aa8.49□□□□□ -1.05
CCDC93-209ENST00000488908 SMCPP49901 116 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms