RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 CFAP70Q5T0N1 1121 aa16.88■□□□□ 0.29
CLIC4-202ENST00000488683 CHGAP10645 457 aaKnown RBP16.87■□□□□ 0.29
CLIC4-202ENST00000488683 MROH1Q8NDA8 1641 aa16.87■□□□□ 0.29
CLIC4-202ENST00000488683 ADGRL1O94910 1474 aa16.86■□□□□ 0.29
CLIC4-202ENST00000488683 SCAF11Q99590 1463 aaKnown RBP16.86■□□□□ 0.29
CLIC4-202ENST00000488683 NUTM2DQ5VT03 806 aaPredicted RBP16.85■□□□□ 0.29
CLIC4-202ENST00000488683 KNSTRNQ9Y448 316 aa16.85■□□□□ 0.29
CLIC4-202ENST00000488683 CFAP65Q6ZU64 1925 aaKnown RBP16.85■□□□□ 0.29
CLIC4-202ENST00000488683 CRBNQ96SW2 442 aa16.85■□□□□ 0.29
CLIC4-202ENST00000488683 MYOM1P52179 1685 aa16.85■□□□□ 0.29
CLIC4-202ENST00000488683 PPP2R1AP30153 589 aa16.84■□□□□ 0.29
CLIC4-202ENST00000488683 PDE3BQ13370 1112 aa16.84■□□□□ 0.29
CLIC4-202ENST00000488683 AMER1Q5JTC6 1135 aaPredicted RBP16.83■□□□□ 0.29
CLIC4-202ENST00000488683 TNNT2P45379 298 aaPredicted RBP16.83■□□□□ 0.28
CLIC4-202ENST00000488683 ADGRF5Q8IZF2 1346 aa16.83■□□□□ 0.28
CLIC4-202ENST00000488683 SYNMO15061 1565 aa16.82■□□□□ 0.28
CLIC4-202ENST00000488683 KANK1Q14678 1352 aa16.82■□□□□ 0.28
CLIC4-202ENST00000488683 PLEKHH1Q9ULM0 1364 aa16.81■□□□□ 0.28
CLIC4-202ENST00000488683 NOP58Q9Y2X3 529 aaKnown RBP16.81■□□□□ 0.28
CLIC4-202ENST00000488683 ZMYM4Q5VZL5 1548 aa16.81■□□□□ 0.28
CLIC4-202ENST00000488683 ASXL2Q76L83 1435 aa16.81■□□□□ 0.28
CLIC4-202ENST00000488683 KIDINS220Q9ULH0 1771 aa16.8■□□□□ 0.28
CLIC4-202ENST00000488683 INSRP06213 1382 aa16.8■□□□□ 0.28
CLIC4-202ENST00000488683 ABCA6Q8N139 1617 aa16.8■□□□□ 0.28
CLIC4-202ENST00000488683 MROH2AA6NES4 1674 aa16.79■□□□□ 0.28
CLIC4-202ENST00000488683 WDR43Q15061 677 aaKnown RBP eCLIP16.79■□□□□ 0.28
CLIC4-202ENST00000488683 SPINK5Q9NQ38 1064 aaPredicted RBP16.79■□□□□ 0.28
CLIC4-202ENST00000488683 MAP3K4Q9Y6R4 1608 aa16.78■□□□□ 0.28
CLIC4-202ENST00000488683 KIAA1210Q9ULL0 1709 aa16.78■□□□□ 0.28
CLIC4-202ENST00000488683 PPRC1Q5VV67 1664 aaKnown RBP16.78■□□□□ 0.28
CLIC4-202ENST00000488683 KIF1BO60333 1816 aa16.77■□□□□ 0.28
CLIC4-202ENST00000488683 EFCAB6Q5THR3 1501 aa16.77■□□□□ 0.28
CLIC4-202ENST00000488683 ASXL1Q8IXJ9 1541 aa16.77■□□□□ 0.28
CLIC4-202ENST00000488683 TMEM132EQ6IEE7 984 aa16.76■□□□□ 0.27
CLIC4-202ENST00000488683 GGT6Q6P531 493 aa16.76■□□□□ 0.27
CLIC4-202ENST00000488683 STAC3Q96MF2 364 aa16.76■□□□□ 0.27
CLIC4-202ENST00000488683 DMRT2Q9Y5R5 561 aa16.76■□□□□ 0.27
CLIC4-202ENST00000488683 KDM5AP29375 1690 aaKnown RBP16.76■□□□□ 0.27
CLIC4-202ENST00000488683 IFT172Q9UG01 1749 aa16.76■□□□□ 0.27
CLIC4-202ENST00000488683 CARD14Q9BXL6 1004 aa16.75■□□□□ 0.27
CLIC4-202ENST00000488683 TRAK1Q9UPV9 953 aa16.75■□□□□ 0.27
CLIC4-202ENST00000488683 CDCA8Q53HL2 280 aa16.75■□□□□ 0.27
CLIC4-202ENST00000488683 NEURL4Q96JN8 1562 aa16.75■□□□□ 0.27
CLIC4-202ENST00000488683 ERVK-7P63135 1459 aa16.74■□□□□ 0.27
CLIC4-202ENST00000488683 EIF3AQ14152 1382 aaKnown RBP16.74■□□□□ 0.27
CLIC4-202ENST00000488683 ANP32AP39687 249 aaKnown RBP16.74■□□□□ 0.27
CLIC4-202ENST00000488683 MYOM2P54296 1465 aa16.74■□□□□ 0.27
CLIC4-202ENST00000488683 APAF1O14727 1248 aa16.74■□□□□ 0.27
CLIC4-202ENST00000488683 NEUROD2Q15784 382 aa16.74■□□□□ 0.27
CLIC4-202ENST00000488683 BCL11AQ9H165 835 aa16.74■□□□□ 0.27
CLIC4-202ENST00000488683 PDE4AP27815 886 aa16.73■□□□□ 0.27
CLIC4-202ENST00000488683 DUSP27Q5VZP5 1158 aa16.72■□□□□ 0.27
CLIC4-202ENST00000488683 IPO9Q96P70 1041 aaKnown RBP16.72■□□□□ 0.27
CLIC4-202ENST00000488683 SAFB2Q14151 953 aaKnown RBP eCLIP16.71■□□□□ 0.27
CLIC4-202ENST00000488683 PIK3C2GO75747 1445 aa16.71■□□□□ 0.27
CLIC4-202ENST00000488683 ZNF521Q96K83 1311 aa16.7■□□□□ 0.26
CLIC4-202ENST00000488683 RRP7AQ9Y3A4 280 aaKnown RBP16.7■□□□□ 0.26
CLIC4-202ENST00000488683 LAS1LQ9Y4W2 734 aaKnown RBP16.7■□□□□ 0.26
CLIC4-202ENST00000488683 BCAR3O75815 825 aa16.7■□□□□ 0.26
CLIC4-202ENST00000488683 ZNF518AQ6AHZ1 1483 aa16.7■□□□□ 0.26
CLIC4-202ENST00000488683 ZBTB47Q9UFB7 747 aaPredicted RBP16.69■□□□□ 0.26
CLIC4-202ENST00000488683 NOS1P29475 1434 aa16.69■□□□□ 0.26
CLIC4-202ENST00000488683 NRXN1Q9ULB1 1477 aa16.69■□□□□ 0.26
CLIC4-202ENST00000488683 FRMPD1Q5SYB0 1578 aa16.68■□□□□ 0.26
CLIC4-202ENST00000488683 NPC1L1Q9UHC9 1359 aa16.68■□□□□ 0.26
CLIC4-202ENST00000488683 SLC12A5Q9H2X9 1139 aa16.68■□□□□ 0.26
CLIC4-202ENST00000488683 LMTK2Q8IWU2 1503 aa16.68■□□□□ 0.26
CLIC4-202ENST00000488683 ADGRB3O60242 1522 aa16.67■□□□□ 0.26
CLIC4-202ENST00000488683 SLC4A3P48751 1232 aa16.67■□□□□ 0.26
CLIC4-202ENST00000488683 NPATQ14207 1427 aa16.67■□□□□ 0.26
CLIC4-202ENST00000488683 GOLGA2Q08379 1002 aa16.66■□□□□ 0.26
CLIC4-202ENST00000488683 DEKP35659 375 aaKnown RBP16.66■□□□□ 0.26
CLIC4-202ENST00000488683 MYO3AQ8NEV4 1616 aa16.66■□□□□ 0.26
CLIC4-202ENST00000488683 RAPGEF3O95398 923 aa16.65■□□□□ 0.26
CLIC4-202ENST00000488683 RGS3P49796 1198 aa16.64■□□□□ 0.25
CLIC4-202ENST00000488683 BACH2Q9BYV9 841 aa16.64■□□□□ 0.25
CLIC4-202ENST00000488683 POGZQ7Z3K3 1410 aa16.64■□□□□ 0.25
CLIC4-202ENST00000488683 PPLO60437 1756 aa16.64■□□□□ 0.25
CLIC4-202ENST00000488683 TCERG1O14776 1098 aaKnown RBP16.63■□□□□ 0.25
CLIC4-202ENST00000488683 CD109Q6YHK3 1445 aa16.63■□□□□ 0.25
CLIC4-202ENST00000488683 SLFN5Q08AF3 891 aa16.62■□□□□ 0.25
CLIC4-202ENST00000488683 CENPJQ9HC77 1338 aaPredicted RBP16.61■□□□□ 0.25
CLIC4-202ENST00000488683 ZC3H13Q5T200 1668 aaKnown RBP16.61■□□□□ 0.25
CLIC4-202ENST00000488683 HECW2Q9P2P5 1572 aa16.61■□□□□ 0.25
CLIC4-202ENST00000488683 SETBP1Q9Y6X0 1596 aa16.61■□□□□ 0.25
CLIC4-202ENST00000488683 ADGRB1O14514 1584 aa16.6■□□□□ 0.25
CLIC4-202ENST00000488683 BCL2L13Q9BXK5 485 aa16.6■□□□□ 0.25
CLIC4-202ENST00000488683 TNNQ9UQP3 1299 aa16.6■□□□□ 0.25
CLIC4-202ENST00000488683 QRICH2Q9H0J4 1663 aa16.6■□□□□ 0.25
CLIC4-202ENST00000488683 SIGLEC1Q9BZZ2 1709 aa16.6■□□□□ 0.25
CLIC4-202ENST00000488683 SBNO2Q9Y2G9 1366 aa16.6■□□□□ 0.25
CLIC4-202ENST00000488683 MLH3Q9UHC1 1453 aa16.6■□□□□ 0.25
CLIC4-202ENST00000488683 NPM1P06748 294 aaKnown RBP eCLIP16.6■□□□□ 0.25
CLIC4-202ENST00000488683 STK26Q9P289 416 aa16.6■□□□□ 0.25
CLIC4-202ENST00000488683 TRMT2AQ8IZ69 625 aaKnown RBP16.59■□□□□ 0.25
CLIC4-202ENST00000488683 ABCC3O15438 1527 aa16.58■□□□□ 0.25
CLIC4-202ENST00000488683 C14orf93Q9H972 538 aaKnown RBP16.58■□□□□ 0.24
CLIC4-202ENST00000488683 NSD3Q9BZ95 1437 aa16.57■□□□□ 0.24
CLIC4-202ENST00000488683 FRAT1Q92837 279 aaPredicted RBP16.57■□□□□ 0.24
CLIC4-202ENST00000488683 MORC1Q86VD1 984 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms