RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 LRCH3Q96II8 777 aa9.25□□□□□ -0.93
TTC3-220ENST00000487711 RNF40O75150 1001 aa9.24□□□□□ -0.93
TTC3-220ENST00000487711 SLC4A3P48751 1232 aa9.24□□□□□ -0.93
TTC3-220ENST00000487711 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.24□□□□□ -0.93
TTC3-220ENST00000487711 CLCN1P35523 988 aa9.23□□□□□ -0.93
TTC3-220ENST00000487711 PDE4DQ08499 809 aa9.23□□□□□ -0.93
TTC3-220ENST00000487711 DAXXQ9UER7 740 aaPredicted RBP9.23□□□□□ -0.93
TTC3-220ENST00000487711 GPCPD1Q9NPB8 672 aa9.22□□□□□ -0.93
TTC3-220ENST00000487711 SOWAHBA6NEL2 793 aa9.21□□□□□ -0.94
TTC3-220ENST00000487711 BCAMP50895 628 aa9.21□□□□□ -0.94
TTC3-220ENST00000487711 SLF2Q8IX21 1173 aa9.21□□□□□ -0.94
TTC3-220ENST00000487711 PARP9Q8IXQ6 854 aa9.2□□□□□ -0.94
TTC3-220ENST00000487711 RNF166Q96A37 237 aaPredicted RBP9.2□□□□□ -0.94
TTC3-220ENST00000487711 DDX11L8A8MPP1 907 aa9.19□□□□□ -0.94
TTC3-220ENST00000487711 THSD4Q6ZMP0 1018 aa9.19□□□□□ -0.94
TTC3-220ENST00000487711 SULF1Q8IWU6 871 aa9.19□□□□□ -0.94
TTC3-220ENST00000487711 NEUROD2Q15784 382 aa9.18□□□□□ -0.94
TTC3-220ENST00000487711 RSPH4AQ5TD94 716 aa9.18□□□□□ -0.94
TTC3-220ENST00000487711 GIGYF2Q6Y7W6 1299 aaKnown RBP9.18□□□□□ -0.94
TTC3-220ENST00000487711 TMUB1Q9BVT8 246 aa9.18□□□□□ -0.94
TTC3-220ENST00000487711 REPIN1Q9BWE0 567 aaKnown RBP9.18□□□□□ -0.94
TTC3-220ENST00000487711 HPS5Q9UPZ3 1129 aa9.18□□□□□ -0.94
TTC3-220ENST00000487711 PPP4CP60510 307 aa9.17□□□□□ -0.94
TTC3-220ENST00000487711 RDH13Q8NBN7 331 aa9.17□□□□□ -0.94
TTC3-220ENST00000487711 GPBP1L1Q9HC44 474 aaPredicted RBP9.17□□□□□ -0.94
TTC3-220ENST00000487711 PTPN5P54829 565 aa9.16□□□□□ -0.94
TTC3-220ENST00000487711 MMRN1Q13201 1228 aa9.16□□□□□ -0.94
TTC3-220ENST00000487711 FAM217BQ9NTX9 383 aaPredicted RBP9.16□□□□□ -0.94
TTC3-220ENST00000487711 TSR3Q9UJK0 312 aaKnown RBP9.16□□□□□ -0.94
TTC3-220ENST00000487711 SSTR3P32745 418 aaPredicted RBP9.15□□□□□ -0.94
TTC3-220ENST00000487711 NECTIN2Q92692 538 aa9.15□□□□□ -0.94
TTC3-220ENST00000487711 BRPF1P55201 1214 aaPredicted RBP9.14□□□□□ -0.95
TTC3-220ENST00000487711 KDM4CQ9H3R0 1056 aa9.14□□□□□ -0.95
TTC3-220ENST00000487711 SLC10A3P09131 477 aa9.13□□□□□ -0.95
TTC3-220ENST00000487711 WBP1LQ9NX94 342 aa9.13□□□□□ -0.95
TTC3-220ENST00000487711 CFHP08603 1231 aa9.12□□□□□ -0.95
TTC3-220ENST00000487711 MS4A1P11836 297 aa9.12□□□□□ -0.95
TTC3-220ENST00000487711 CD46P15529 392 aa9.11□□□□□ -0.95
TTC3-220ENST00000487711 HCSTQ9UBK5 93 aa9.11□□□□□ -0.95
TTC3-220ENST00000487711 KMT5BQ4FZB7 885 aa9.09□□□□□ -0.95
TTC3-220ENST00000487711 BEGAINQ9BUH8 593 aa9.09□□□□□ -0.95
TTC3-220ENST00000487711 GCGRP47871 477 aa9.08□□□□□ -0.96
TTC3-220ENST00000487711 NYAP1Q6ZVC0 841 aa9.08□□□□□ -0.96
TTC3-220ENST00000487711 PRR14Q9BWN1 585 aa9.08□□□□□ -0.96
TTC3-220ENST00000487711 APLP1P51693 650 aa9.07□□□□□ -0.96
TTC3-220ENST00000487711 NUTM1Q86Y26 1132 aa9.06□□□□□ -0.96
TTC3-220ENST00000487711 FAM117AQ9C073 453 aa9.06□□□□□ -0.96
TTC3-220ENST00000487711 PLSCR2Q9NRY7 297 aa9.06□□□□□ -0.96
TTC3-220ENST00000487711 DDRGK1Q96HY6 314 aa9.05□□□□□ -0.96
TTC3-220ENST00000487711 KDM4AO75164 1064 aa9.04□□□□□ -0.96
TTC3-220ENST00000487711 ACTN4O43707 911 aaKnown RBP9.03□□□□□ -0.96
TTC3-220ENST00000487711 FUT2Q10981 343 aa9.03□□□□□ -0.96
TTC3-220ENST00000487711 IL27Q8NEV9 243 aa9.03□□□□□ -0.96
TTC3-220ENST00000487711 PCDHB3Q9Y5E6 796 aa9.03□□□□□ -0.96
TTC3-220ENST00000487711 USP46P62068 366 aa9.02□□□□□ -0.97
TTC3-220ENST00000487711 GRIPAP1Q4V328 841 aa9.02□□□□□ -0.97
TTC3-220ENST00000487711 DIXDC1Q155Q3 683 aa9.01□□□□□ -0.97
TTC3-220ENST00000487711 SPIRE2Q8WWL2 714 aa9.01□□□□□ -0.97
TTC3-220ENST00000487711 TBC1D2Q9BYX2 928 aa9.01□□□□□ -0.97
TTC3-220ENST00000487711 ATP6V1AP38606 617 aa9□□□□□ -0.97
TTC3-220ENST00000487711 PUS10Q3MIT2 529 aaKnown RBP9□□□□□ -0.97
TTC3-220ENST00000487711 PLEKHG3A1L390 1219 aa8.99□□□□□ -0.97
TTC3-220ENST00000487711 HOXA2O43364 376 aa8.99□□□□□ -0.97
TTC3-220ENST00000487711 COPS2P61201 443 aa8.99□□□□□ -0.97
TTC3-220ENST00000487711 BLOC1S3Q6QNY0 202 aa8.98□□□□□ -0.97
TTC3-220ENST00000487711 RSPH6AQ9H0K4 717 aa8.98□□□□□ -0.97
TTC3-220ENST00000487711 MTRQ99707 1265 aa8.97□□□□□ -0.97
TTC3-220ENST00000487711 MOXD2PA6NHM9 499 aa8.96□□□□□ -0.98
TTC3-220ENST00000487711 NR1I2O75469 434 aa8.96□□□□□ -0.98
TTC3-220ENST00000487711 NDUFV2P19404 249 aa8.96□□□□□ -0.98
TTC3-220ENST00000487711 MORN1Q5T089 497 aa8.96□□□□□ -0.98
TTC3-220ENST00000487711 MYSM1Q5VVJ2 828 aa8.96□□□□□ -0.98
TTC3-220ENST00000487711 HLA-CQ95604 372 aa8.96□□□□□ -0.98
TTC3-220ENST00000487711 GUCA2AQ02747 115 aa8.95□□□□□ -0.98
TTC3-220ENST00000487711 IL21Q9HBE4 155 aa8.95□□□□□ -0.98
TTC3-220ENST00000487711 ATP1B4Q9UN42 357 aaPredicted RBP8.95□□□□□ -0.98
TTC3-220ENST00000487711 TJAP1Q5JTD0 557 aa8.94□□□□□ -0.98
TTC3-220ENST00000487711 RIC3Q7Z5B4 369 aa8.94□□□□□ -0.98
TTC3-220ENST00000487711 POLR3EQ9NVU0 708 aa8.94□□□□□ -0.98
TTC3-220ENST00000487711 SLC27A5Q9Y2P5 690 aa8.94□□□□□ -0.98
TTC3-220ENST00000487711 FDX1P10109 184 aa8.93□□□□□ -0.98
TTC3-220ENST00000487711 SH3D19Q5HYK7 790 aa8.93□□□□□ -0.98
TTC3-220ENST00000487711 RSBN1LQ6PCB5 846 aaPredicted RBP8.93□□□□□ -0.98
TTC3-220ENST00000487711 SCUBE3Q8IX30 993 aa8.93□□□□□ -0.98
TTC3-220ENST00000487711 SPTLC1O15269 473 aa8.92□□□□□ -0.98
TTC3-220ENST00000487711 ZPR1O75312 459 aa8.92□□□□□ -0.98
TTC3-220ENST00000487711 CLK2P49760 499 aaKnown RBP8.92□□□□□ -0.98
TTC3-220ENST00000487711 KCNC4Q03721 635 aa8.92□□□□□ -0.98
TTC3-220ENST00000487711 ZNF516Q92618 1163 aa8.92□□□□□ -0.98
TTC3-220ENST00000487711 ITGBL1O95965 494 aaPredicted RBP8.91□□□□□ -0.98
TTC3-220ENST00000487711 SKIV2LQ15477 1246 aaKnown RBP8.91□□□□□ -0.98
TTC3-220ENST00000487711 CSPP1Q1MSJ5 1256 aa8.91□□□□□ -0.98
TTC3-220ENST00000487711 Q3C1V9 767 aa8.91□□□□□ -0.98
TTC3-220ENST00000487711 GJA5P36382 358 aa8.9□□□□□ -0.98
TTC3-220ENST00000487711 LIMD1Q9UGP4 676 aa8.9□□□□□ -0.98
TTC3-220ENST00000487711 PCDHGC3Q9UN70 934 aa8.9□□□□□ -0.98
TTC3-220ENST00000487711 TLL1O43897 1013 aa8.89□□□□□ -0.99
TTC3-220ENST00000487711 FMNL1O95466 1100 aaPredicted RBP8.89□□□□□ -0.99
TTC3-220ENST00000487711 PCMTD1Q96MG8 357 aaPredicted RBP8.89□□□□□ -0.99
TTC3-220ENST00000487711 GOPCQ9HD26 462 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms