RNA–Protein interactions for RNA: ENST00000487585.5

HDAC11-218, Transcript of histone deacetylase 11, humanhuman

TSL 4

Gene HDAC11, Length 610 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-218ENST00000487585 ILDR2Q71H61 639 aa29.56■■■□□ 2.32
HDAC11-218ENST00000487585 SLC26A8Q96RN1 970 aa29.55■■■□□ 2.32
HDAC11-218ENST00000487585 KCNA6P17658 529 aa29.54■■■□□ 2.32
HDAC11-218ENST00000487585 RIMS2Q9UQ26 1411 aa29.54■■■□□ 2.32
HDAC11-218ENST00000487585 HDGFP51858 240 aaKnown RBP29.52■■■□□ 2.32
HDAC11-218ENST00000487585 NWD1Q149M9 1564 aa29.52■■■□□ 2.32
HDAC11-218ENST00000487585 PLEKHG1Q9ULL1 1385 aa29.52■■■□□ 2.32
HDAC11-218ENST00000487585 TMEM94Q12767 1356 aa29.48■■■□□ 2.31
HDAC11-218ENST00000487585 NKTRP30414 1462 aaKnown RBP29.48■■■□□ 2.31
HDAC11-218ENST00000487585 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.46■■■□□ 2.31
HDAC11-218ENST00000487585 BCANQ96GW7 911 aa29.46■■■□□ 2.31
HDAC11-218ENST00000487585 PPP1R15AO75807 674 aaPredicted RBP29.45■■■□□ 2.31
HDAC11-218ENST00000487585 CHGAP10645 457 aaKnown RBP29.45■■■□□ 2.31
HDAC11-218ENST00000487585 MED1Q15648 1581 aaPredicted RBP29.43■■■□□ 2.3
HDAC11-218ENST00000487585 PROSER2Q86WR7 435 aaPredicted RBP29.42■■■□□ 2.3
HDAC11-218ENST00000487585 NAIPQ13075 1403 aa29.42■■■□□ 2.3
HDAC11-218ENST00000487585 CHD2O14647 1828 aaKnown RBP29.41■■■□□ 2.3
HDAC11-218ENST00000487585 SPHKAPQ2M3C7 1700 aa29.41■■■□□ 2.3
HDAC11-218ENST00000487585 TBX22Q9Y458 520 aa29.4■■■□□ 2.3
HDAC11-218ENST00000487585 FAM135BQ49AJ0 1406 aa29.37■■■□□ 2.29
HDAC11-218ENST00000487585 ADAMTS13Q76LX8 1427 aa29.37■■■□□ 2.29
HDAC11-218ENST00000487585 SOCS7O14512 581 aa29.37■■■□□ 2.29
HDAC11-218ENST00000487585 SENP3Q9H4L4 574 aaPredicted RBP29.37■■■□□ 2.29
HDAC11-218ENST00000487585 DIP2AQ14689 1571 aa29.37■■■□□ 2.29
HDAC11-218ENST00000487585 RBM33Q96EV2 1170 aaKnown RBP29.34■■■□□ 2.29
HDAC11-218ENST00000487585 NUTM2DQ5VT03 806 aaPredicted RBP29.33■■■□□ 2.29
HDAC11-218ENST00000487585 HFM1A2PYH4 1435 aa29.32■■■□□ 2.28
HDAC11-218ENST00000487585 PIK3R4Q99570 1358 aa29.32■■■□□ 2.28
HDAC11-218ENST00000487585 MSH6P52701 1360 aa29.3■■■□□ 2.28
HDAC11-218ENST00000487585 TRPM2O94759 1503 aa29.29■■■□□ 2.28
HDAC11-218ENST00000487585 NCOA3Q9Y6Q9 1424 aa29.28■■■□□ 2.28
HDAC11-218ENST00000487585 ROBO1Q9Y6N7 1651 aa29.27■■■□□ 2.28
HDAC11-218ENST00000487585 CLTCL1P53675 1640 aa29.27■■■□□ 2.28
HDAC11-218ENST00000487585 SETBP1Q9Y6X0 1596 aa29.24■■■□□ 2.27
HDAC11-218ENST00000487585 NRXN3Q9Y4C0 1643 aa29.23■■■□□ 2.27
HDAC11-218ENST00000487585 ZNF326Q5BKZ1 582 aaKnown RBP29.2■■■□□ 2.26
HDAC11-218ENST00000487585 SLAIN2Q9P270 581 aa29.2■■■□□ 2.26
HDAC11-218ENST00000487585 PTPRUQ92729 1446 aa29.2■■■□□ 2.26
HDAC11-218ENST00000487585 NEXMIFQ5QGS0 1516 aa29.19■■■□□ 2.26
HDAC11-218ENST00000487585 KIF1BO60333 1816 aa29.18■■■□□ 2.26
HDAC11-218ENST00000487585 TRIM52Q96A61 297 aa29.18■■■□□ 2.26
HDAC11-218ENST00000487585 PHF23Q9BUL5 403 aaPredicted RBP29.17■■■□□ 2.26
HDAC11-218ENST00000487585 AMOTL2Q9Y2J4 779 aa29.17■■■□□ 2.26
HDAC11-218ENST00000487585 XRN1Q8IZH2 1706 aaKnown RBP29.15■■■□□ 2.26
HDAC11-218ENST00000487585 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.14■■■□□ 2.25
HDAC11-218ENST00000487585 SLC4A1APQ9BWU0 796 aaKnown RBP29.13■■■□□ 2.25
HDAC11-218ENST00000487585 C19orf44Q9H6X5 657 aa29.13■■■□□ 2.25
HDAC11-218ENST00000487585 C14orf37Q86TY3 774 aa29.12■■■□□ 2.25
HDAC11-218ENST00000487585 CADPS2Q86UW7 1296 aa29.11■■■□□ 2.25
HDAC11-218ENST00000487585 METP08581 1390 aa29.09■■■□□ 2.25
HDAC11-218ENST00000487585 PHLPP1O60346 1717 aa29.08■■■□□ 2.25
HDAC11-218ENST00000487585 ATF3P18847 181 aa29.07■■■□□ 2.24
HDAC11-218ENST00000487585 DCCP43146 1447 aa29.05■■■□□ 2.24
HDAC11-218ENST00000487585 RPGRIP1LQ68CZ1 1315 aa29.03■■■□□ 2.24
HDAC11-218ENST00000487585 COL16A1Q07092 1604 aaPredicted RBP29.02■■■□□ 2.24
HDAC11-218ENST00000487585 VGFO15240 615 aaPredicted RBP29.02■■■□□ 2.24
HDAC11-218ENST00000487585 RGS17Q9UGC6 210 aaPredicted RBP29.01■■■□□ 2.23
HDAC11-218ENST00000487585 JCADQ9P266 1359 aa29.01■■■□□ 2.23
HDAC11-218ENST00000487585 AHDC1Q5TGY3 1603 aaPredicted RBP29■■■□□ 2.23
HDAC11-218ENST00000487585 SETD1AO15047 1707 aaKnown RBP29■■■□□ 2.23
HDAC11-218ENST00000487585 PPLO60437 1756 aa28.98■■■□□ 2.23
HDAC11-218ENST00000487585 FOXD1Q16676 465 aa28.96■■■□□ 2.23
HDAC11-218ENST00000487585 ADGRL3Q9HAR2 1447 aa28.95■■■□□ 2.23
HDAC11-218ENST00000487585 MPHOSPH9Q99550 1183 aa28.94■■■□□ 2.22
HDAC11-218ENST00000487585 MST1RQ04912 1400 aa28.94■■■□□ 2.22
HDAC11-218ENST00000487585 BRINP3Q76B58 766 aa28.93■■■□□ 2.22
HDAC11-218ENST00000487585 CCDC144AA2RUR9 1427 aa28.93■■■□□ 2.22
HDAC11-218ENST00000487585 PTCH1Q13635 1447 aa28.93■■■□□ 2.22
HDAC11-218ENST00000487585 PRAG1Q86YV5 1406 aa28.93■■■□□ 2.22
HDAC11-218ENST00000487585 ACIN1Q9UKV3 1341 aaKnown RBP28.92■■■□□ 2.22
HDAC11-218ENST00000487585 NALCNQ8IZF0 1738 aa28.91■■■□□ 2.22
HDAC11-218ENST00000487585 ASXL1Q8IXJ9 1541 aa28.89■■■□□ 2.22
HDAC11-218ENST00000487585 SPATA31E1Q6ZUB1 1445 aa28.89■■■□□ 2.22
HDAC11-218ENST00000487585 SHPRHQ149N8 1683 aa28.87■■■□□ 2.21
HDAC11-218ENST00000487585 SPATA31A6Q5VVP1 1343 aa28.87■■■□□ 2.21
HDAC11-218ENST00000487585 SETD5Q9C0A6 1442 aa28.86■■■□□ 2.21
HDAC11-218ENST00000487585 ROBO2Q9HCK4 1378 aa28.86■■■□□ 2.21
HDAC11-218ENST00000487585 NHSL1Q5SYE7 1610 aa28.85■■■□□ 2.21
HDAC11-218ENST00000487585 IFT172Q9UG01 1749 aa28.84■■■□□ 2.21
HDAC11-218ENST00000487585 POTEAQ6S8J7 498 aa28.83■■■□□ 2.21
HDAC11-218ENST00000487585 ANKRD30BQ9BXX2 1392 aa28.82■■■□□ 2.2
HDAC11-218ENST00000487585 LRP6O75581 1613 aa28.82■■■□□ 2.2
HDAC11-218ENST00000487585 ADGRF5Q8IZF2 1346 aa28.81■■■□□ 2.2
HDAC11-218ENST00000487585 RGL3Q3MIN7 710 aa28.8■■■□□ 2.2
HDAC11-218ENST00000487585 C1orf167Q5SNV9 1468 aa28.78■■■□□ 2.2
HDAC11-218ENST00000487585 RAB3GAP2Q9H2M9 1393 aa28.75■■■□□ 2.19
HDAC11-218ENST00000487585 LAMC1P11047 1609 aa28.73■■■□□ 2.19
HDAC11-218ENST00000487585 TECPR2O15040 1411 aa28.73■■■□□ 2.19
HDAC11-218ENST00000487585 PIK3C2GO75747 1445 aa28.73■■■□□ 2.19
HDAC11-218ENST00000487585 LRRC59Q96AG4 307 aaKnown RBP28.72■■■□□ 2.19
HDAC11-218ENST00000487585 MEX3CQ5U5Q3 659 aaKnown RBP28.7■■■□□ 2.18
HDAC11-218ENST00000487585 LRPPRCP42704 1394 aaKnown RBP28.7■■■□□ 2.18
HDAC11-218ENST00000487585 DDX17Q92841 729 aaKnown RBP28.69■■■□□ 2.18
HDAC11-218ENST00000487585 CDC42BPGQ6DT37 1551 aa28.69■■■□□ 2.18
HDAC11-218ENST00000487585 KNDC1Q76NI1 1749 aa28.68■■■□□ 2.18
HDAC11-218ENST00000487585 ABCC11Q96J66 1382 aa28.67■■■□□ 2.18
HDAC11-218ENST00000487585 NRXN1Q9ULB1 1477 aa28.66■■■□□ 2.18
HDAC11-218ENST00000487585 PNPLA6Q8IY17 1366 aa28.65■■■□□ 2.18
HDAC11-218ENST00000487585 ZNF772Q68DY9 489 aaPredicted RBP28.65■■■□□ 2.18
HDAC11-218ENST00000487585 ORAI2Q96SN7 254 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms