RNA–Protein interactions for RNA: ENST00000486790.2

RCC1-212, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 5

Gene RCC1, Length 481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-212ENST00000486790 PROSER2Q86WR7 435 aaPredicted RBP40.6■■■■■ 4.09
RCC1-212ENST00000486790 SENP3Q9H4L4 574 aaPredicted RBP40.59■■■■■ 4.09
RCC1-212ENST00000486790 TMEM94Q12767 1356 aa40.58■■■■■ 4.09
RCC1-212ENST00000486790 ABCF1Q8NE71 845 aaKnown RBP eCLIP40.56■■■■■ 4.08
RCC1-212ENST00000486790 NKTRP30414 1462 aaKnown RBP40.55■■■■■ 4.08
RCC1-212ENST00000486790 PLEKHG1Q9ULL1 1385 aa40.52■■■■■ 4.08
RCC1-212ENST00000486790 FAM135BQ49AJ0 1406 aa40.51■■■■■ 4.08
RCC1-212ENST00000486790 RIMS2Q9UQ26 1411 aa40.51■■■■■ 4.08
RCC1-212ENST00000486790 CHGAP10645 457 aaKnown RBP40.51■■■■■ 4.08
RCC1-212ENST00000486790 MYO5BQ9ULV0 1848 aa40.51■■■■■ 4.07
RCC1-212ENST00000486790 ZFYVE9O95405 1425 aa40.5■■■■■ 4.07
RCC1-212ENST00000486790 TMEM131LA2VDJ0 1609 aa40.49■■■■■ 4.07
RCC1-212ENST00000486790 IQGAP3Q86VI3 1631 aa40.49■■■■■ 4.07
RCC1-212ENST00000486790 NWD1Q149M9 1564 aa40.48■■■■■ 4.07
RCC1-212ENST00000486790 ITGAEP38570 1179 aa40.48■■■■■ 4.07
RCC1-212ENST00000486790 NUP155O75694 1391 aa40.47■■■■■ 4.07
RCC1-212ENST00000486790 E9PCH4 1651 aa40.46■■■■■ 4.07
RCC1-212ENST00000486790 MSH6P52701 1360 aa40.46■■■■■ 4.07
RCC1-212ENST00000486790 TBX22Q9Y458 520 aa40.41■■■■■ 4.06
RCC1-212ENST00000486790 CHD2O14647 1828 aaKnown RBP40.38■■■■■ 4.05
RCC1-212ENST00000486790 RBM33Q96EV2 1170 aaKnown RBP40.35■■■■■ 4.05
RCC1-212ENST00000486790 DIP2AQ14689 1571 aa40.33■■■■■ 4.05
RCC1-212ENST00000486790 ROBO1Q9Y6N7 1651 aa40.33■■■■■ 4.05
RCC1-212ENST00000486790 NCOA3Q9Y6Q9 1424 aa40.32■■■■■ 4.04
RCC1-212ENST00000486790 PIK3R4Q99570 1358 aa40.31■■■■■ 4.04
RCC1-212ENST00000486790 PPARGC1BQ86YN6 1023 aaKnown RBP40.3■■■■■ 4.04
RCC1-212ENST00000486790 SLAIN2Q9P270 581 aa40.29■■■■■ 4.04
RCC1-212ENST00000486790 C14orf37Q86TY3 774 aa40.28■■■■■ 4.04
RCC1-212ENST00000486790 NUTM2DQ5VT03 806 aaPredicted RBP40.24■■■■■ 4.03
RCC1-212ENST00000486790 ADAMTS13Q76LX8 1427 aa40.2■■■■■ 4.03
RCC1-212ENST00000486790 TRPM2O94759 1503 aa40.2■■■■■ 4.03
RCC1-212ENST00000486790 SPHKAPQ2M3C7 1700 aa40.19■■■■■ 4.02
RCC1-212ENST00000486790 CADPS2Q86UW7 1296 aa40.18■■■■■ 4.02
RCC1-212ENST00000486790 ZNF326Q5BKZ1 582 aaKnown RBP40.16■■■■■ 4.02
RCC1-212ENST00000486790 ATF3P18847 181 aa40.15■■■■■ 4.02
RCC1-212ENST00000486790 C19orf44Q9H6X5 657 aa40.15■■■■■ 4.02
RCC1-212ENST00000486790 PHLPP1O60346 1717 aa40.13■■■■■ 4.02
RCC1-212ENST00000486790 RRBP1Q9P2E9 1410 aaKnown RBP40.13■■■■■ 4.01
RCC1-212ENST00000486790 AMOTL2Q9Y2J4 779 aa40.1■■■■■ 4.01
RCC1-212ENST00000486790 JCADQ9P266 1359 aa40.09■■■■■ 4.01
RCC1-212ENST00000486790 RGS17Q9UGC6 210 aaPredicted RBP40.04■■■■■ 4
RCC1-212ENST00000486790 SIPA1L2Q9P2F8 1722 aaPredicted RBP40.04■■■■■ 4
RCC1-212ENST00000486790 SETBP1Q9Y6X0 1596 aa40.02■■■■■ 4
RCC1-212ENST00000486790 NAIPQ13075 1403 aa39.99■■■■□ 3.99
RCC1-212ENST00000486790 KIF1BO60333 1816 aa39.98■■■■□ 3.99
RCC1-212ENST00000486790 DCCP43146 1447 aa39.96■■■■□ 3.99
RCC1-212ENST00000486790 TRIM52Q96A61 297 aa39.95■■■■□ 3.99
RCC1-212ENST00000486790 PTPRUQ92729 1446 aa39.94■■■■□ 3.98
RCC1-212ENST00000486790 SPATA31A6Q5VVP1 1343 aa39.92■■■■□ 3.98
RCC1-212ENST00000486790 CLTCL1P53675 1640 aa39.92■■■■□ 3.98
RCC1-212ENST00000486790 COL16A1Q07092 1604 aaPredicted RBP39.92■■■■□ 3.98
RCC1-212ENST00000486790 NRXN3Q9Y4C0 1643 aa39.92■■■■□ 3.98
RCC1-212ENST00000486790 XRN1Q8IZH2 1706 aaKnown RBP39.9■■■■□ 3.98
RCC1-212ENST00000486790 AHDC1Q5TGY3 1603 aaPredicted RBP39.9■■■■□ 3.98
RCC1-212ENST00000486790 HFM1A2PYH4 1435 aa39.89■■■■□ 3.98
RCC1-212ENST00000486790 VGFO15240 615 aaPredicted RBP39.87■■■■□ 3.97
RCC1-212ENST00000486790 NEXMIFQ5QGS0 1516 aa39.86■■■■□ 3.97
RCC1-212ENST00000486790 MEX3CQ5U5Q3 659 aaKnown RBP39.86■■■■□ 3.97
RCC1-212ENST00000486790 POTEAQ6S8J7 498 aa39.85■■■■□ 3.97
RCC1-212ENST00000486790 SLC4A1APQ9BWU0 796 aaKnown RBP39.84■■■■□ 3.97
RCC1-212ENST00000486790 METP08581 1390 aa39.84■■■■□ 3.97
RCC1-212ENST00000486790 BRINP3Q76B58 766 aa39.82■■■■□ 3.97
RCC1-212ENST00000486790 RPGRIP1LQ68CZ1 1315 aa39.8■■■■□ 3.96
RCC1-212ENST00000486790 SHPRHQ149N8 1683 aa39.79■■■■□ 3.96
RCC1-212ENST00000486790 ZNF772Q68DY9 489 aaPredicted RBP39.76■■■■□ 3.96
RCC1-212ENST00000486790 ADGRL3Q9HAR2 1447 aa39.74■■■■□ 3.95
RCC1-212ENST00000486790 ASXL1Q8IXJ9 1541 aa39.73■■■■□ 3.95
RCC1-212ENST00000486790 MST1RQ04912 1400 aa39.72■■■■□ 3.95
RCC1-212ENST00000486790 LRRC59Q96AG4 307 aaKnown RBP39.68■■■■□ 3.94
RCC1-212ENST00000486790 PTCH1Q13635 1447 aa39.66■■■■□ 3.94
RCC1-212ENST00000486790 LRP6O75581 1613 aa39.65■■■■□ 3.94
RCC1-212ENST00000486790 SETD5Q9C0A6 1442 aa39.65■■■■□ 3.94
RCC1-212ENST00000486790 ACIN1Q9UKV3 1341 aaKnown RBP39.63■■■■□ 3.93
RCC1-212ENST00000486790 NHSL1Q5SYE7 1610 aa39.62■■■■□ 3.93
RCC1-212ENST00000486790 NALCNQ8IZF0 1738 aa39.62■■■■□ 3.93
RCC1-212ENST00000486790 NUTM2BA6NNL0 878 aaPredicted RBP39.6■■■■□ 3.93
RCC1-212ENST00000486790 NUTM2EB1AL46 878 aaPredicted RBP39.6■■■■□ 3.93
RCC1-212ENST00000486790 NUTM2AQ8IVF1 878 aaPredicted RBP39.6■■■■□ 3.93
RCC1-212ENST00000486790 PPLO60437 1756 aa39.59■■■■□ 3.93
RCC1-212ENST00000486790 CCDC144AA2RUR9 1427 aa39.57■■■■□ 3.93
RCC1-212ENST00000486790 SETD1AO15047 1707 aaKnown RBP39.56■■■■□ 3.92
RCC1-212ENST00000486790 PRAG1Q86YV5 1406 aa39.55■■■■□ 3.92
RCC1-212ENST00000486790 C1orf167Q5SNV9 1468 aa39.52■■■■□ 3.92
RCC1-212ENST00000486790 ROBO2Q9HCK4 1378 aa39.51■■■■□ 3.92
RCC1-212ENST00000486790 RXRBP28702 533 aa39.49■■■■□ 3.91
RCC1-212ENST00000486790 MPHOSPH9Q99550 1183 aa39.48■■■■□ 3.91
RCC1-212ENST00000486790 FOXD1Q16676 465 aa39.47■■■■□ 3.91
RCC1-212ENST00000486790 ANKRD30BQ9BXX2 1392 aa39.46■■■■□ 3.91
RCC1-212ENST00000486790 RGL3Q3MIN7 710 aa39.43■■■■□ 3.9
RCC1-212ENST00000486790 PNPLA6Q8IY17 1366 aa39.43■■■■□ 3.9
RCC1-212ENST00000486790 AFF2P51816 1311 aa39.42■■■■□ 3.9
RCC1-212ENST00000486790 DDX17Q92841 729 aaKnown RBP39.42■■■■□ 3.9
RCC1-212ENST00000486790 LAMC1P11047 1609 aa39.4■■■■□ 3.9
RCC1-212ENST00000486790 C8orf37Q96NL8 207 aa39.39■■■■□ 3.9
RCC1-212ENST00000486790 CDK12Q9NYV4 1490 aaPredicted RBP39.37■■■■□ 3.89
RCC1-212ENST00000486790 ORAI2Q96SN7 254 aa39.36■■■■□ 3.89
RCC1-212ENST00000486790 SOS2Q07890 1332 aaPredicted RBP39.36■■■■□ 3.89
RCC1-212ENST00000486790 ADGRF5Q8IZF2 1346 aa39.36■■■■□ 3.89
RCC1-212ENST00000486790 SPATA31E1Q6ZUB1 1445 aa39.35■■■■□ 3.89
RCC1-212ENST00000486790 CDC42BPGQ6DT37 1551 aa39.32■■■■□ 3.88
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms