RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 ITGBL1O95965 494 aaPredicted RBP10.51□□□□□ -0.73
SMC4-215ENST00000484799 FECHP22830 423 aa10.51□□□□□ -0.73
SMC4-215ENST00000484799 IL21Q9HBE4 155 aa10.51□□□□□ -0.73
SMC4-215ENST00000484799 METTL3Q86U44 580 aaKnown RBP10.5□□□□□ -0.73
SMC4-215ENST00000484799 APLP1P51693 650 aa10.49□□□□□ -0.73
SMC4-215ENST00000484799 KRI1Q8N9T8 703 aaKnown RBP10.49□□□□□ -0.73
SMC4-215ENST00000484799 MTRQ99707 1265 aa10.49□□□□□ -0.73
SMC4-215ENST00000484799 COPS2P61201 443 aa10.48□□□□□ -0.73
SMC4-215ENST00000484799 PCDHB3Q9Y5E6 796 aa10.48□□□□□ -0.73
SMC4-215ENST00000484799 A0A0G2JS52 829 aa10.47□□□□□ -0.73
SMC4-215ENST00000484799 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.47□□□□□ -0.73
SMC4-215ENST00000484799 RDH13Q8NBN7 331 aa10.47□□□□□ -0.73
SMC4-215ENST00000484799 DAXXQ9UER7 740 aaPredicted RBP10.47□□□□□ -0.73
SMC4-215ENST00000484799 RGS20O76081 388 aa10.45□□□□□ -0.74
SMC4-215ENST00000484799 CFHP08603 1231 aa10.45□□□□□ -0.74
SMC4-215ENST00000484799 TJAP1Q5JTD0 557 aa10.45□□□□□ -0.74
SMC4-215ENST00000484799 LMOD2Q6P5Q4 547 aa10.45□□□□□ -0.74
SMC4-215ENST00000484799 SULF1Q8IWU6 871 aa10.45□□□□□ -0.74
SMC4-215ENST00000484799 DDX11L8A8MPP1 907 aa10.44□□□□□ -0.74
SMC4-215ENST00000484799 GPR37O15354 613 aa10.44□□□□□ -0.74
SMC4-215ENST00000484799 GGCXP38435 758 aa10.44□□□□□ -0.74
SMC4-215ENST00000484799 MAP2K5Q13163 448 aa10.44□□□□□ -0.74
SMC4-215ENST00000484799 MINK1Q8N4C8 1332 aaPredicted RBP10.43□□□□□ -0.74
SMC4-215ENST00000484799 IRF6O14896 467 aa10.41□□□□□ -0.74
SMC4-215ENST00000484799 ACTN4O43707 911 aaKnown RBP10.4□□□□□ -0.74
SMC4-215ENST00000484799 ZNF516Q92618 1163 aa10.4□□□□□ -0.74
SMC4-215ENST00000484799 NR1I2O75469 434 aa10.39□□□□□ -0.75
SMC4-215ENST00000484799 NLRP7Q8WX94 980 aa10.39□□□□□ -0.75
SMC4-215ENST00000484799 ZPR1O75312 459 aa10.38□□□□□ -0.75
SMC4-215ENST00000484799 SLC10A3P09131 477 aa10.38□□□□□ -0.75
SMC4-215ENST00000484799 BLOC1S3Q6QNY0 202 aa10.37□□□□□ -0.75
SMC4-215ENST00000484799 GRIPAP1Q4V328 841 aa10.36□□□□□ -0.75
SMC4-215ENST00000484799 PPP1R18Q6NYC8 613 aa10.35□□□□□ -0.75
SMC4-215ENST00000484799 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.35□□□□□ -0.75
SMC4-215ENST00000484799 SLC24A1O60721 1099 aa10.34□□□□□ -0.75
SMC4-215ENST00000484799 MDM2Q00987 491 aaPredicted RBP10.34□□□□□ -0.75
SMC4-215ENST00000484799 NKX2-3Q8TAU0 364 aa10.33□□□□□ -0.76
SMC4-215ENST00000484799 CCDC102AQ96A19 550 aa10.33□□□□□ -0.76
SMC4-215ENST00000484799 PHOX2BQ99453 314 aa10.33□□□□□ -0.76
SMC4-215ENST00000484799 CLCN1P35523 988 aa10.32□□□□□ -0.76
SMC4-215ENST00000484799 ATP6V1AP38606 617 aa10.31□□□□□ -0.76
SMC4-215ENST00000484799 GCGRP47871 477 aa10.31□□□□□ -0.76
SMC4-215ENST00000484799 PUS10Q3MIT2 529 aaKnown RBP10.31□□□□□ -0.76
SMC4-215ENST00000484799 ZC3H15Q8WU90 426 aaKnown RBP10.31□□□□□ -0.76
SMC4-215ENST00000484799 SCUBE3Q8IX30 993 aa10.3□□□□□ -0.76
SMC4-215ENST00000484799 TMUB1Q9BVT8 246 aa10.3□□□□□ -0.76
SMC4-215ENST00000484799 IRX2Q9BZI1 471 aaPredicted RBP10.3□□□□□ -0.76
SMC4-215ENST00000484799 BARGINQ6ZT62 677 aa10.29□□□□□ -0.76
SMC4-215ENST00000484799 GPCPD1Q9NPB8 672 aa10.29□□□□□ -0.76
SMC4-215ENST00000484799 FUT2Q10981 343 aa10.28□□□□□ -0.76
SMC4-215ENST00000484799 ZMYND10O75800 440 aa10.27□□□□□ -0.77
SMC4-215ENST00000484799 TTLL12Q14166 644 aaPredicted RBP10.27□□□□□ -0.77
SMC4-215ENST00000484799 BCANQ96GW7 911 aa10.27□□□□□ -0.77
SMC4-215ENST00000484799 PRKD2Q9BZL6 878 aa10.27□□□□□ -0.77
SMC4-215ENST00000484799 NUTM1Q86Y26 1132 aa10.26□□□□□ -0.77
SMC4-215ENST00000484799 SPSB2Q99619 263 aa10.26□□□□□ -0.77
SMC4-215ENST00000484799 FMNL1O95466 1100 aaPredicted RBP10.25□□□□□ -0.77
SMC4-215ENST00000484799 SLC6A16Q9GZN6 736 aa10.25□□□□□ -0.77
SMC4-215ENST00000484799 TLL1O43897 1013 aa10.24□□□□□ -0.77
SMC4-215ENST00000484799 KDM4AO75164 1064 aa10.24□□□□□ -0.77
SMC4-215ENST00000484799 ADH1BP00325 375 aa10.24□□□□□ -0.77
SMC4-215ENST00000484799 CD46P15529 392 aa10.23□□□□□ -0.77
SMC4-215ENST00000484799 MORN1Q5T089 497 aa10.23□□□□□ -0.77
SMC4-215ENST00000484799 S1PR4O95977 384 aa10.22□□□□□ -0.77
SMC4-215ENST00000484799 USP46P62068 366 aa10.22□□□□□ -0.77
SMC4-215ENST00000484799 Q3C1V9 767 aa10.22□□□□□ -0.77
SMC4-215ENST00000484799 AK7Q96M32 723 aa10.21□□□□□ -0.77
SMC4-215ENST00000484799 SLC27A5Q9Y2P5 690 aa10.21□□□□□ -0.77
SMC4-215ENST00000484799 V9GY48 417 aaPredicted RBP10.21□□□□□ -0.77
SMC4-215ENST00000484799 RNF223E7ERA6 249 aa10.2□□□□□ -0.78
SMC4-215ENST00000484799 SSTR3P32745 418 aaPredicted RBP10.2□□□□□ -0.78
SMC4-215ENST00000484799 PPEF1O14829 653 aaPredicted RBP10.18□□□□□ -0.78
SMC4-215ENST00000484799 SLC19A1P41440 591 aa10.18□□□□□ -0.78
SMC4-215ENST00000484799 ANKLE1Q8NAG6 615 aa10.18□□□□□ -0.78
SMC4-215ENST00000484799 FAM217BQ9NTX9 383 aaPredicted RBP10.18□□□□□ -0.78
SMC4-215ENST00000484799 LAPTM4AQ15012 233 aa10.17□□□□□ -0.78
SMC4-215ENST00000484799 GFRA3O60609 400 aa10.16□□□□□ -0.78
SMC4-215ENST00000484799 SALL2Q9Y467 1007 aaPredicted RBP10.16□□□□□ -0.78
SMC4-215ENST00000484799 ZBTB24O43167 697 aaPredicted RBP10.14□□□□□ -0.79
SMC4-215ENST00000484799 AMHR2Q16671 573 aa10.14□□□□□ -0.79
SMC4-215ENST00000484799 BRICD5Q6PL45 260 aa10.14□□□□□ -0.79
SMC4-215ENST00000484799 Q6ZNB5 142 aa10.13□□□□□ -0.79
SMC4-215ENST00000484799 TRIM66O15016 1216 aa10.12□□□□□ -0.79
SMC4-215ENST00000484799 DIXDC1Q155Q3 683 aa10.12□□□□□ -0.79
SMC4-215ENST00000484799 GIGYF2Q6Y7W6 1299 aaKnown RBP10.12□□□□□ -0.79
SMC4-215ENST00000484799 HOXA2O43364 376 aa10.11□□□□□ -0.79
SMC4-215ENST00000484799 CD2BP2O95400 341 aaKnown RBP10.11□□□□□ -0.79
SMC4-215ENST00000484799 THAP11Q96EK4 314 aa10.11□□□□□ -0.79
SMC4-215ENST00000484799 USB1Q9BQ65 265 aaKnown RBP10.11□□□□□ -0.79
SMC4-215ENST00000484799 SLC24A3Q9HC58 644 aa10.11□□□□□ -0.79
SMC4-215ENST00000484799 PDZRN3Q9UPQ7 1066 aa10.11□□□□□ -0.79
SMC4-215ENST00000484799 BEGAINQ9BUH8 593 aa10.1□□□□□ -0.79
SMC4-215ENST00000484799 REPIN1Q9BWE0 567 aaKnown RBP10.1□□□□□ -0.79
SMC4-215ENST00000484799 RNF19BQ6ZMZ0 732 aa10.09□□□□□ -0.79
SMC4-215ENST00000484799 C6orf229H3BNL8 230 aa10.08□□□□□ -0.8
SMC4-215ENST00000484799 FDX1P10109 184 aa10.08□□□□□ -0.8
SMC4-215ENST00000484799 MSS51Q4VC12 460 aa10.08□□□□□ -0.8
SMC4-215ENST00000484799 SPRYD7Q5W111 196 aa10.08□□□□□ -0.8
SMC4-215ENST00000484799 FAM160A2Q8N612 972 aaPredicted RBP10.08□□□□□ -0.8
SMC4-215ENST00000484799 FCF1Q9Y324 198 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms