RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 RRBP1Q9P2E9 1410 aaKnown RBP14.33□□□□□ -0.11
NUP50-215ENST00000484186 E9PCH4 1651 aa14.33□□□□□ -0.12
NUP50-215ENST00000484186 ZFYVE9O95405 1425 aa14.32□□□□□ -0.12
NUP50-215ENST00000484186 RIMS2Q9UQ26 1411 aa14.32□□□□□ -0.12
NUP50-215ENST00000484186 PPP1R15AO75807 674 aaPredicted RBP14.32□□□□□ -0.12
NUP50-215ENST00000484186 PROSER2Q86WR7 435 aaPredicted RBP14.32□□□□□ -0.12
NUP50-215ENST00000484186 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.32□□□□□ -0.12
NUP50-215ENST00000484186 PLEKHG1Q9ULL1 1385 aa14.32□□□□□ -0.12
NUP50-215ENST00000484186 TMEM131LA2VDJ0 1609 aa14.31□□□□□ -0.12
NUP50-215ENST00000484186 SENP3Q9H4L4 574 aaPredicted RBP14.31□□□□□ -0.12
NUP50-215ENST00000484186 TMEM94Q12767 1356 aa14.3□□□□□ -0.12
NUP50-215ENST00000484186 TBX22Q9Y458 520 aa14.29□□□□□ -0.12
NUP50-215ENST00000484186 MYO5BQ9ULV0 1848 aa14.29□□□□□ -0.12
NUP50-215ENST00000484186 NUTM2DQ5VT03 806 aaPredicted RBP14.28□□□□□ -0.12
NUP50-215ENST00000484186 XIRP1Q702N8 1843 aaKnown RBP14.28□□□□□ -0.12
NUP50-215ENST00000484186 RBM33Q96EV2 1170 aaKnown RBP14.28□□□□□ -0.12
NUP50-215ENST00000484186 NAIPQ13075 1403 aa14.26□□□□□ -0.13
NUP50-215ENST00000484186 NKTRP30414 1462 aaKnown RBP14.25□□□□□ -0.13
NUP50-215ENST00000484186 SOCS7O14512 581 aa14.25□□□□□ -0.13
NUP50-215ENST00000484186 NWD1Q149M9 1564 aa14.25□□□□□ -0.13
NUP50-215ENST00000484186 FAM135BQ49AJ0 1406 aa14.24□□□□□ -0.13
NUP50-215ENST00000484186 ADAMTS13Q76LX8 1427 aa14.23□□□□□ -0.13
NUP50-215ENST00000484186 CHD2O14647 1828 aaKnown RBP14.22□□□□□ -0.13
NUP50-215ENST00000484186 ZNF326Q5BKZ1 582 aaKnown RBP14.22□□□□□ -0.13
NUP50-215ENST00000484186 TRIM52Q96A61 297 aa14.22□□□□□ -0.13
NUP50-215ENST00000484186 MED1Q15648 1581 aaPredicted RBP14.22□□□□□ -0.13
NUP50-215ENST00000484186 MSH6P52701 1360 aa14.22□□□□□ -0.13
NUP50-215ENST00000484186 PIK3R4Q99570 1358 aa14.22□□□□□ -0.13
NUP50-215ENST00000484186 HFM1A2PYH4 1435 aa14.21□□□□□ -0.13
NUP50-215ENST00000484186 SPHKAPQ2M3C7 1700 aa14.21□□□□□ -0.14
NUP50-215ENST00000484186 SLAIN2Q9P270 581 aa14.2□□□□□ -0.14
NUP50-215ENST00000484186 NCOA3Q9Y6Q9 1424 aa14.2□□□□□ -0.14
NUP50-215ENST00000484186 DIP2AQ14689 1571 aa14.19□□□□□ -0.14
NUP50-215ENST00000484186 AMOTL2Q9Y2J4 779 aa14.19□□□□□ -0.14
NUP50-215ENST00000484186 PHF23Q9BUL5 403 aaPredicted RBP14.18□□□□□ -0.14
NUP50-215ENST00000484186 C14orf37Q86TY3 774 aa14.17□□□□□ -0.14
NUP50-215ENST00000484186 SLC4A1APQ9BWU0 796 aaKnown RBP14.17□□□□□ -0.14
NUP50-215ENST00000484186 TRPM2O94759 1503 aa14.16□□□□□ -0.14
NUP50-215ENST00000484186 C19orf44Q9H6X5 657 aa14.16□□□□□ -0.14
NUP50-215ENST00000484186 PTPRUQ92729 1446 aa14.15□□□□□ -0.14
NUP50-215ENST00000484186 CLTCL1P53675 1640 aa14.15□□□□□ -0.14
NUP50-215ENST00000484186 ROBO1Q9Y6N7 1651 aa14.15□□□□□ -0.14
NUP50-215ENST00000484186 CADPS2Q86UW7 1296 aa14.14□□□□□ -0.15
NUP50-215ENST00000484186 SETBP1Q9Y6X0 1596 aa14.13□□□□□ -0.15
NUP50-215ENST00000484186 ATF3P18847 181 aa14.13□□□□□ -0.15
NUP50-215ENST00000484186 METP08581 1390 aa14.12□□□□□ -0.15
NUP50-215ENST00000484186 NEXMIFQ5QGS0 1516 aa14.12□□□□□ -0.15
NUP50-215ENST00000484186 VGFO15240 615 aaPredicted RBP14.12□□□□□ -0.15
NUP50-215ENST00000484186 NRXN3Q9Y4C0 1643 aa14.12□□□□□ -0.15
NUP50-215ENST00000484186 KIF1BO60333 1816 aa14.11□□□□□ -0.15
NUP50-215ENST00000484186 RPGRIP1LQ68CZ1 1315 aa14.11□□□□□ -0.15
NUP50-215ENST00000484186 FOXD1Q16676 465 aa14.1□□□□□ -0.15
NUP50-215ENST00000484186 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.09□□□□□ -0.15
NUP50-215ENST00000484186 MPHOSPH9Q99550 1183 aa14.08□□□□□ -0.16
NUP50-215ENST00000484186 RGS17Q9UGC6 210 aaPredicted RBP14.08□□□□□ -0.16
NUP50-215ENST00000484186 XRN1Q8IZH2 1706 aaKnown RBP14.07□□□□□ -0.16
NUP50-215ENST00000484186 JCADQ9P266 1359 aa14.07□□□□□ -0.16
NUP50-215ENST00000484186 PHLPP1O60346 1717 aa14.07□□□□□ -0.16
NUP50-215ENST00000484186 DCCP43146 1447 aa14.07□□□□□ -0.16
NUP50-215ENST00000484186 ACIN1Q9UKV3 1341 aaKnown RBP14.06□□□□□ -0.16
NUP50-215ENST00000484186 BRINP3Q76B58 766 aa14.05□□□□□ -0.16
NUP50-215ENST00000484186 CCDC144AA2RUR9 1427 aa14.04□□□□□ -0.16
NUP50-215ENST00000484186 RGL3Q3MIN7 710 aa14.03□□□□□ -0.16
NUP50-215ENST00000484186 COL16A1Q07092 1604 aaPredicted RBP14.02□□□□□ -0.16
NUP50-215ENST00000484186 MST1RQ04912 1400 aa14.02□□□□□ -0.16
NUP50-215ENST00000484186 SETD5Q9C0A6 1442 aa14.02□□□□□ -0.16
NUP50-215ENST00000484186 ADGRL3Q9HAR2 1447 aa14.02□□□□□ -0.16
NUP50-215ENST00000484186 AHDC1Q5TGY3 1603 aaPredicted RBP14.01□□□□□ -0.17
NUP50-215ENST00000484186 SPATA31A6Q5VVP1 1343 aa14.01□□□□□ -0.17
NUP50-215ENST00000484186 ROBO2Q9HCK4 1378 aa14□□□□□ -0.17
NUP50-215ENST00000484186 ADGRF5Q8IZF2 1346 aa14□□□□□ -0.17
NUP50-215ENST00000484186 POTEAQ6S8J7 498 aa14□□□□□ -0.17
NUP50-215ENST00000484186 PPLO60437 1756 aa14□□□□□ -0.17
NUP50-215ENST00000484186 PTCH1Q13635 1447 aa13.99□□□□□ -0.17
NUP50-215ENST00000484186 SPATA31E1Q6ZUB1 1445 aa13.99□□□□□ -0.17
NUP50-215ENST00000484186 SETD1AO15047 1707 aaKnown RBP13.98□□□□□ -0.17
NUP50-215ENST00000484186 ANKRD30BQ9BXX2 1392 aa13.98□□□□□ -0.17
NUP50-215ENST00000484186 ASXL1Q8IXJ9 1541 aa13.98□□□□□ -0.17
NUP50-215ENST00000484186 PRAG1Q86YV5 1406 aa13.98□□□□□ -0.17
NUP50-215ENST00000484186 LRRC59Q96AG4 307 aaKnown RBP13.97□□□□□ -0.17
NUP50-215ENST00000484186 MEX3CQ5U5Q3 659 aaKnown RBP13.96□□□□□ -0.17
NUP50-215ENST00000484186 DDX17Q92841 729 aaKnown RBP13.96□□□□□ -0.17
NUP50-215ENST00000484186 RAB3GAP2Q9H2M9 1393 aa13.96□□□□□ -0.18
NUP50-215ENST00000484186 NALCNQ8IZF0 1738 aa13.95□□□□□ -0.18
NUP50-215ENST00000484186 C1orf167Q5SNV9 1468 aa13.95□□□□□ -0.18
NUP50-215ENST00000484186 SHPRHQ149N8 1683 aa13.95□□□□□ -0.18
NUP50-215ENST00000484186 LRP6O75581 1613 aa13.94□□□□□ -0.18
NUP50-215ENST00000484186 NUTM2BA6NNL0 878 aaPredicted RBP13.94□□□□□ -0.18
NUP50-215ENST00000484186 NUTM2EB1AL46 878 aaPredicted RBP13.94□□□□□ -0.18
NUP50-215ENST00000484186 NUTM2AQ8IVF1 878 aaPredicted RBP13.94□□□□□ -0.18
NUP50-215ENST00000484186 ORAI2Q96SN7 254 aa13.94□□□□□ -0.18
NUP50-215ENST00000484186 STK26Q9P289 416 aa13.94□□□□□ -0.18
NUP50-215ENST00000484186 TMEM132EQ6IEE7 984 aa13.93□□□□□ -0.18
NUP50-215ENST00000484186 NHSL1Q5SYE7 1610 aa13.93□□□□□ -0.18
NUP50-215ENST00000484186 ZNF772Q68DY9 489 aaPredicted RBP13.92□□□□□ -0.18
NUP50-215ENST00000484186 WAPLQ7Z5K2 1190 aa13.92□□□□□ -0.18
NUP50-215ENST00000484186 LRPPRCP42704 1394 aaKnown RBP13.92□□□□□ -0.18
NUP50-215ENST00000484186 ABCC11Q96J66 1382 aa13.92□□□□□ -0.18
NUP50-215ENST00000484186 PIK3C2GO75747 1445 aa13.91□□□□□ -0.18
NUP50-215ENST00000484186 IFT172Q9UG01 1749 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms