RNA–Protein interactions for RNA: ENST00000482863.1

PCOLCE-206, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 4

Gene PCOLCE, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-206ENST00000482863 RPRD2Q5VT52 1461 aaKnown RBP24.07■■□□□ 1.44
PCOLCE-206ENST00000482863 PROSER2Q86WR7 435 aaPredicted RBP24.07■■□□□ 1.44
PCOLCE-206ENST00000482863 UNC13BO14795 1591 aa24.07■■□□□ 1.44
PCOLCE-206ENST00000482863 ROCK1Q13464 1354 aa24.05■■□□□ 1.44
PCOLCE-206ENST00000482863 ZFYVE9O95405 1425 aa24.05■■□□□ 1.44
PCOLCE-206ENST00000482863 RIMS2Q9UQ26 1411 aa24.05■■□□□ 1.44
PCOLCE-206ENST00000482863 MYO5BQ9ULV0 1848 aa24.04■■□□□ 1.44
PCOLCE-206ENST00000482863 GCC2Q8IWJ2 1684 aa24.02■■□□□ 1.44
PCOLCE-206ENST00000482863 TMEM131LA2VDJ0 1609 aa24.02■■□□□ 1.44
PCOLCE-206ENST00000482863 NUP155O75694 1391 aa24.02■■□□□ 1.44
PCOLCE-206ENST00000482863 E9PCH4 1651 aa24.02■■□□□ 1.44
PCOLCE-206ENST00000482863 PPP1R15AO75807 674 aaPredicted RBP24.01■■□□□ 1.43
PCOLCE-206ENST00000482863 PLEKHG1Q9ULL1 1385 aa24■■□□□ 1.43
PCOLCE-206ENST00000482863 PHF23Q9BUL5 403 aaPredicted RBP23.98■■□□□ 1.43
PCOLCE-206ENST00000482863 IQGAP3Q86VI3 1631 aa23.97■■□□□ 1.43
PCOLCE-206ENST00000482863 NWD1Q149M9 1564 aa23.95■■□□□ 1.43
PCOLCE-206ENST00000482863 FAM135BQ49AJ0 1406 aa23.95■■□□□ 1.42
PCOLCE-206ENST00000482863 HDGFP51858 240 aaKnown RBP23.92■■□□□ 1.42
PCOLCE-206ENST00000482863 TBX22Q9Y458 520 aa23.92■■□□□ 1.42
PCOLCE-206ENST00000482863 NKTRP30414 1462 aaKnown RBP23.92■■□□□ 1.42
PCOLCE-206ENST00000482863 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.91■■□□□ 1.42
PCOLCE-206ENST00000482863 ADAMTS13Q76LX8 1427 aa23.91■■□□□ 1.42
PCOLCE-206ENST00000482863 RGS17Q9UGC6 210 aaPredicted RBP23.9■■□□□ 1.42
PCOLCE-206ENST00000482863 ROBO1Q9Y6N7 1651 aa23.89■■□□□ 1.42
PCOLCE-206ENST00000482863 MSH6P52701 1360 aa23.89■■□□□ 1.41
PCOLCE-206ENST00000482863 CHD2O14647 1828 aaKnown RBP23.88■■□□□ 1.41
PCOLCE-206ENST00000482863 SLAIN2Q9P270 581 aa23.87■■□□□ 1.41
PCOLCE-206ENST00000482863 PTPRUQ92729 1446 aa23.84■■□□□ 1.41
PCOLCE-206ENST00000482863 RRBP1Q9P2E9 1410 aaKnown RBP23.83■■□□□ 1.4
PCOLCE-206ENST00000482863 C14orf37Q86TY3 774 aa23.82■■□□□ 1.4
PCOLCE-206ENST00000482863 ZNF326Q5BKZ1 582 aaKnown RBP23.81■■□□□ 1.4
PCOLCE-206ENST00000482863 AMOTL2Q9Y2J4 779 aa23.81■■□□□ 1.4
PCOLCE-206ENST00000482863 NAIPQ13075 1403 aa23.79■■□□□ 1.4
PCOLCE-206ENST00000482863 SPHKAPQ2M3C7 1700 aa23.77■■□□□ 1.4
PCOLCE-206ENST00000482863 POTEAQ6S8J7 498 aa23.76■■□□□ 1.39
PCOLCE-206ENST00000482863 DIP2AQ14689 1571 aa23.76■■□□□ 1.39
PCOLCE-206ENST00000482863 PIK3R4Q99570 1358 aa23.75■■□□□ 1.39
PCOLCE-206ENST00000482863 NRXN3Q9Y4C0 1643 aa23.74■■□□□ 1.39
PCOLCE-206ENST00000482863 TRIM52Q96A61 297 aa23.74■■□□□ 1.39
PCOLCE-206ENST00000482863 METP08581 1390 aa23.74■■□□□ 1.39
PCOLCE-206ENST00000482863 TRPM2O94759 1503 aa23.74■■□□□ 1.39
PCOLCE-206ENST00000482863 CLTCL1P53675 1640 aa23.73■■□□□ 1.39
PCOLCE-206ENST00000482863 PHLPP1O60346 1717 aa23.73■■□□□ 1.39
PCOLCE-206ENST00000482863 C19orf44Q9H6X5 657 aa23.73■■□□□ 1.39
PCOLCE-206ENST00000482863 NCOA3Q9Y6Q9 1424 aa23.73■■□□□ 1.39
PCOLCE-206ENST00000482863 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.73■■□□□ 1.39
PCOLCE-206ENST00000482863 ATF3P18847 181 aa23.71■■□□□ 1.39
PCOLCE-206ENST00000482863 CADPS2Q86UW7 1296 aa23.7■■□□□ 1.38
PCOLCE-206ENST00000482863 SETBP1Q9Y6X0 1596 aa23.69■■□□□ 1.38
PCOLCE-206ENST00000482863 JCADQ9P266 1359 aa23.68■■□□□ 1.38
PCOLCE-206ENST00000482863 NEXMIFQ5QGS0 1516 aa23.68■■□□□ 1.38
PCOLCE-206ENST00000482863 COL16A1Q07092 1604 aaPredicted RBP23.67■■□□□ 1.38
PCOLCE-206ENST00000482863 FOXD1Q16676 465 aa23.66■■□□□ 1.38
PCOLCE-206ENST00000482863 BRINP3Q76B58 766 aa23.66■■□□□ 1.38
PCOLCE-206ENST00000482863 XRN1Q8IZH2 1706 aaKnown RBP23.64■■□□□ 1.38
PCOLCE-206ENST00000482863 SLC4A1APQ9BWU0 796 aaKnown RBP23.64■■□□□ 1.37
PCOLCE-206ENST00000482863 HFM1A2PYH4 1435 aa23.64■■□□□ 1.37
PCOLCE-206ENST00000482863 LRP6O75581 1613 aa23.62■■□□□ 1.37
PCOLCE-206ENST00000482863 DDX17Q92841 729 aaKnown RBP23.61■■□□□ 1.37
PCOLCE-206ENST00000482863 AHDC1Q5TGY3 1603 aaPredicted RBP23.59■■□□□ 1.37
PCOLCE-206ENST00000482863 MST1RQ04912 1400 aa23.59■■□□□ 1.37
PCOLCE-206ENST00000482863 KIF1BO60333 1816 aa23.56■■□□□ 1.36
PCOLCE-206ENST00000482863 NUTM2BA6NNL0 878 aaPredicted RBP23.56■■□□□ 1.36
PCOLCE-206ENST00000482863 NUTM2EB1AL46 878 aaPredicted RBP23.56■■□□□ 1.36
PCOLCE-206ENST00000482863 NUTM2AQ8IVF1 878 aaPredicted RBP23.56■■□□□ 1.36
PCOLCE-206ENST00000482863 MEX3CQ5U5Q3 659 aaKnown RBP23.55■■□□□ 1.36
PCOLCE-206ENST00000482863 ASXL1Q8IXJ9 1541 aa23.54■■□□□ 1.36
PCOLCE-206ENST00000482863 DCCP43146 1447 aa23.54■■□□□ 1.36
PCOLCE-206ENST00000482863 VGFO15240 615 aaPredicted RBP23.54■■□□□ 1.36
PCOLCE-206ENST00000482863 SPATA31A6Q5VVP1 1343 aa23.54■■□□□ 1.36
PCOLCE-206ENST00000482863 ADGRL3Q9HAR2 1447 aa23.53■■□□□ 1.36
PCOLCE-206ENST00000482863 ROBO2Q9HCK4 1378 aa23.52■■□□□ 1.36
PCOLCE-206ENST00000482863 NALCNQ8IZF0 1738 aa23.51■■□□□ 1.35
PCOLCE-206ENST00000482863 SHPRHQ149N8 1683 aa23.49■■□□□ 1.35
PCOLCE-206ENST00000482863 RGL3Q3MIN7 710 aa23.49■■□□□ 1.35
PCOLCE-206ENST00000482863 SETD1AO15047 1707 aaKnown RBP23.49■■□□□ 1.35
PCOLCE-206ENST00000482863 RPGRIP1LQ68CZ1 1315 aa23.48■■□□□ 1.35
PCOLCE-206ENST00000482863 ADGRF5Q8IZF2 1346 aa23.48■■□□□ 1.35
PCOLCE-206ENST00000482863 ORAI2Q96SN7 254 aa23.47■■□□□ 1.35
PCOLCE-206ENST00000482863 MPHOSPH9Q99550 1183 aa23.47■■□□□ 1.35
PCOLCE-206ENST00000482863 C1orf167Q5SNV9 1468 aa23.46■■□□□ 1.35
PCOLCE-206ENST00000482863 SETD5Q9C0A6 1442 aa23.45■■□□□ 1.34
PCOLCE-206ENST00000482863 NHSL1Q5SYE7 1610 aa23.44■■□□□ 1.34
PCOLCE-206ENST00000482863 PPLO60437 1756 aa23.44■■□□□ 1.34
PCOLCE-206ENST00000482863 PTCH1Q13635 1447 aa23.43■■□□□ 1.34
PCOLCE-206ENST00000482863 LRRC59Q96AG4 307 aaKnown RBP23.43■■□□□ 1.34
PCOLCE-206ENST00000482863 ZNF772Q68DY9 489 aaPredicted RBP23.42■■□□□ 1.34
PCOLCE-206ENST00000482863 STK26Q9P289 416 aa23.42■■□□□ 1.34
PCOLCE-206ENST00000482863 CCDC144AA2RUR9 1427 aa23.41■■□□□ 1.34
PCOLCE-206ENST00000482863 PNPLA6Q8IY17 1366 aa23.4■■□□□ 1.34
PCOLCE-206ENST00000482863 AFF2P51816 1311 aa23.4■■□□□ 1.34
PCOLCE-206ENST00000482863 TMEM132EQ6IEE7 984 aa23.39■■□□□ 1.33
PCOLCE-206ENST00000482863 WAPLQ7Z5K2 1190 aa23.39■■□□□ 1.33
PCOLCE-206ENST00000482863 SPATA31E1Q6ZUB1 1445 aa23.39■■□□□ 1.33
PCOLCE-206ENST00000482863 C8orf37Q96NL8 207 aa23.37■■□□□ 1.33
PCOLCE-206ENST00000482863 PRAG1Q86YV5 1406 aa23.35■■□□□ 1.33
PCOLCE-206ENST00000482863 NUTM2FA1L443 756 aa23.35■■□□□ 1.33
PCOLCE-206ENST00000482863 ADAMTS2O95450 1211 aa23.35■■□□□ 1.33
PCOLCE-206ENST00000482863 RXRBP28702 533 aa23.35■■□□□ 1.33
PCOLCE-206ENST00000482863 PLEKHH1Q9ULM0 1364 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms