RNA–Protein interactions for RNA: ENST00000482173.5

CHPF2-203, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 4

Gene CHPF2, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-203ENST00000482173 PROSER2Q86WR7 435 aaPredicted RBP29.68■■■□□ 2.34
CHPF2-203ENST00000482173 GCC2Q8IWJ2 1684 aa29.67■■■□□ 2.34
CHPF2-203ENST00000482173 HDGFP51858 240 aaKnown RBP29.66■■■□□ 2.34
CHPF2-203ENST00000482173 MYO5BQ9ULV0 1848 aa29.64■■■□□ 2.34
CHPF2-203ENST00000482173 PPP1R15AO75807 674 aaPredicted RBP29.64■■■□□ 2.34
CHPF2-203ENST00000482173 CHGAP10645 457 aaKnown RBP29.64■■■□□ 2.34
CHPF2-203ENST00000482173 RBM33Q96EV2 1170 aaKnown RBP29.64■■■□□ 2.34
CHPF2-203ENST00000482173 PHF23Q9BUL5 403 aaPredicted RBP29.63■■■□□ 2.33
CHPF2-203ENST00000482173 ZFYVE9O95405 1425 aa29.62■■■□□ 2.33
CHPF2-203ENST00000482173 RIMS2Q9UQ26 1411 aa29.62■■■□□ 2.33
CHPF2-203ENST00000482173 TMEM131LA2VDJ0 1609 aa29.61■■■□□ 2.33
CHPF2-203ENST00000482173 E9PCH4 1651 aa29.6■■■□□ 2.33
CHPF2-203ENST00000482173 NUP155O75694 1391 aa29.6■■■□□ 2.33
CHPF2-203ENST00000482173 PLEKHG1Q9ULL1 1385 aa29.6■■■□□ 2.33
CHPF2-203ENST00000482173 FAM135BQ49AJ0 1406 aa29.58■■■□□ 2.33
CHPF2-203ENST00000482173 IQGAP3Q86VI3 1631 aa29.58■■■□□ 2.33
CHPF2-203ENST00000482173 NKTRP30414 1462 aaKnown RBP29.57■■■□□ 2.32
CHPF2-203ENST00000482173 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.57■■■□□ 2.32
CHPF2-203ENST00000482173 NWD1Q149M9 1564 aa29.56■■■□□ 2.32
CHPF2-203ENST00000482173 NUTM2DQ5VT03 806 aaPredicted RBP29.53■■■□□ 2.32
CHPF2-203ENST00000482173 TBX22Q9Y458 520 aa29.53■■■□□ 2.32
CHPF2-203ENST00000482173 MSH6P52701 1360 aa29.51■■■□□ 2.31
CHPF2-203ENST00000482173 CHD2O14647 1828 aaKnown RBP29.5■■■□□ 2.31
CHPF2-203ENST00000482173 ROBO1Q9Y6N7 1651 aa29.47■■■□□ 2.31
CHPF2-203ENST00000482173 SLAIN2Q9P270 581 aa29.45■■■□□ 2.31
CHPF2-203ENST00000482173 ADAMTS13Q76LX8 1427 aa29.44■■■□□ 2.3
CHPF2-203ENST00000482173 C14orf37Q86TY3 774 aa29.4■■■□□ 2.3
CHPF2-203ENST00000482173 RGS17Q9UGC6 210 aaPredicted RBP29.38■■■□□ 2.29
CHPF2-203ENST00000482173 DIP2AQ14689 1571 aa29.38■■■□□ 2.29
CHPF2-203ENST00000482173 PIK3R4Q99570 1358 aa29.38■■■□□ 2.29
CHPF2-203ENST00000482173 NCOA3Q9Y6Q9 1424 aa29.37■■■□□ 2.29
CHPF2-203ENST00000482173 RRBP1Q9P2E9 1410 aaKnown RBP29.36■■■□□ 2.29
CHPF2-203ENST00000482173 SPHKAPQ2M3C7 1700 aa29.35■■■□□ 2.29
CHPF2-203ENST00000482173 ZNF326Q5BKZ1 582 aaKnown RBP29.34■■■□□ 2.29
CHPF2-203ENST00000482173 AMOTL2Q9Y2J4 779 aa29.34■■■□□ 2.29
CHPF2-203ENST00000482173 TRPM2O94759 1503 aa29.32■■■□□ 2.28
CHPF2-203ENST00000482173 C19orf44Q9H6X5 657 aa29.32■■■□□ 2.28
CHPF2-203ENST00000482173 ATF3P18847 181 aa29.3■■■□□ 2.28
CHPF2-203ENST00000482173 CADPS2Q86UW7 1296 aa29.3■■■□□ 2.28
CHPF2-203ENST00000482173 NAIPQ13075 1403 aa29.29■■■□□ 2.28
CHPF2-203ENST00000482173 PHLPP1O60346 1717 aa29.29■■■□□ 2.28
CHPF2-203ENST00000482173 PTPRUQ92729 1446 aa29.28■■■□□ 2.28
CHPF2-203ENST00000482173 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.27■■■□□ 2.28
CHPF2-203ENST00000482173 JCADQ9P266 1359 aa29.25■■■□□ 2.27
CHPF2-203ENST00000482173 NRXN3Q9Y4C0 1643 aa29.23■■■□□ 2.27
CHPF2-203ENST00000482173 SETBP1Q9Y6X0 1596 aa29.23■■■□□ 2.27
CHPF2-203ENST00000482173 TRIM52Q96A61 297 aa29.23■■■□□ 2.27
CHPF2-203ENST00000482173 POTEAQ6S8J7 498 aa29.22■■■□□ 2.27
CHPF2-203ENST00000482173 CLTCL1P53675 1640 aa29.22■■■□□ 2.27
CHPF2-203ENST00000482173 METP08581 1390 aa29.19■■■□□ 2.26
CHPF2-203ENST00000482173 COL16A1Q07092 1604 aaPredicted RBP29.19■■■□□ 2.26
CHPF2-203ENST00000482173 XRN1Q8IZH2 1706 aaKnown RBP29.17■■■□□ 2.26
CHPF2-203ENST00000482173 NEXMIFQ5QGS0 1516 aa29.16■■■□□ 2.26
CHPF2-203ENST00000482173 KIF1BO60333 1816 aa29.16■■■□□ 2.26
CHPF2-203ENST00000482173 HFM1A2PYH4 1435 aa29.16■■■□□ 2.26
CHPF2-203ENST00000482173 BRINP3Q76B58 766 aa29.14■■■□□ 2.26
CHPF2-203ENST00000482173 SLC4A1APQ9BWU0 796 aaKnown RBP29.13■■■□□ 2.25
CHPF2-203ENST00000482173 AHDC1Q5TGY3 1603 aaPredicted RBP29.12■■■□□ 2.25
CHPF2-203ENST00000482173 DCCP43146 1447 aa29.12■■■□□ 2.25
CHPF2-203ENST00000482173 SPATA31A6Q5VVP1 1343 aa29.11■■■□□ 2.25
CHPF2-203ENST00000482173 VGFO15240 615 aaPredicted RBP29.09■■■□□ 2.25
CHPF2-203ENST00000482173 MEX3CQ5U5Q3 659 aaKnown RBP29.06■■■□□ 2.24
CHPF2-203ENST00000482173 MST1RQ04912 1400 aa29.05■■■□□ 2.24
CHPF2-203ENST00000482173 LRP6O75581 1613 aa29.05■■■□□ 2.24
CHPF2-203ENST00000482173 RPGRIP1LQ68CZ1 1315 aa29.04■■■□□ 2.24
CHPF2-203ENST00000482173 ADGRL3Q9HAR2 1447 aa29.03■■■□□ 2.24
CHPF2-203ENST00000482173 SHPRHQ149N8 1683 aa29.02■■■□□ 2.24
CHPF2-203ENST00000482173 ASXL1Q8IXJ9 1541 aa29.02■■■□□ 2.24
CHPF2-203ENST00000482173 FOXD1Q16676 465 aa29■■■□□ 2.23
CHPF2-203ENST00000482173 NUTM2BA6NNL0 878 aaPredicted RBP28.98■■■□□ 2.23
CHPF2-203ENST00000482173 NUTM2EB1AL46 878 aaPredicted RBP28.98■■■□□ 2.23
CHPF2-203ENST00000482173 NUTM2AQ8IVF1 878 aaPredicted RBP28.98■■■□□ 2.23
CHPF2-203ENST00000482173 NALCNQ8IZF0 1738 aa28.97■■■□□ 2.23
CHPF2-203ENST00000482173 ZNF772Q68DY9 489 aaPredicted RBP28.97■■■□□ 2.23
CHPF2-203ENST00000482173 LRRC59Q96AG4 307 aaKnown RBP28.96■■■□□ 2.23
CHPF2-203ENST00000482173 SETD5Q9C0A6 1442 aa28.95■■■□□ 2.23
CHPF2-203ENST00000482173 SETD1AO15047 1707 aaKnown RBP28.95■■■□□ 2.23
CHPF2-203ENST00000482173 DDX17Q92841 729 aaKnown RBP28.95■■■□□ 2.22
CHPF2-203ENST00000482173 NHSL1Q5SYE7 1610 aa28.94■■■□□ 2.22
CHPF2-203ENST00000482173 ROBO2Q9HCK4 1378 aa28.94■■■□□ 2.22
CHPF2-203ENST00000482173 PTCH1Q13635 1447 aa28.94■■■□□ 2.22
CHPF2-203ENST00000482173 PPLO60437 1756 aa28.93■■■□□ 2.22
CHPF2-203ENST00000482173 MPHOSPH9Q99550 1183 aa28.9■■■□□ 2.22
CHPF2-203ENST00000482173 C1orf167Q5SNV9 1468 aa28.9■■■□□ 2.22
CHPF2-203ENST00000482173 RGL3Q3MIN7 710 aa28.89■■■□□ 2.22
CHPF2-203ENST00000482173 CCDC144AA2RUR9 1427 aa28.88■■■□□ 2.21
CHPF2-203ENST00000482173 PRAG1Q86YV5 1406 aa28.86■■■□□ 2.21
CHPF2-203ENST00000482173 ORAI2Q96SN7 254 aa28.85■■■□□ 2.21
CHPF2-203ENST00000482173 ADGRF5Q8IZF2 1346 aa28.85■■■□□ 2.21
CHPF2-203ENST00000482173 PNPLA6Q8IY17 1366 aa28.84■■■□□ 2.21
CHPF2-203ENST00000482173 AFF2P51816 1311 aa28.83■■■□□ 2.21
CHPF2-203ENST00000482173 RXRBP28702 533 aa28.82■■■□□ 2.2
CHPF2-203ENST00000482173 SPATA31E1Q6ZUB1 1445 aa28.82■■■□□ 2.2
CHPF2-203ENST00000482173 ANKRD30BQ9BXX2 1392 aa28.8■■■□□ 2.2
CHPF2-203ENST00000482173 C8orf37Q96NL8 207 aa28.79■■■□□ 2.2
CHPF2-203ENST00000482173 STK26Q9P289 416 aa28.79■■■□□ 2.2
CHPF2-203ENST00000482173 SOS2Q07890 1332 aaPredicted RBP28.78■■■□□ 2.2
CHPF2-203ENST00000482173 LAMC1P11047 1609 aa28.76■■■□□ 2.2
CHPF2-203ENST00000482173 ACIN1Q9UKV3 1341 aaKnown RBP28.74■■■□□ 2.19
CHPF2-203ENST00000482173 ADAMTS2O95450 1211 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms