RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 KDM4CQ9H3R0 1056 aa8.66□□□□□ -1.02
SMARCA1-204ENST00000478420 TMEM134Q9H6X4 195 aa8.66□□□□□ -1.02
SMARCA1-204ENST00000478420 GIGYF2Q6Y7W6 1299 aaKnown RBP8.65□□□□□ -1.02
SMARCA1-204ENST00000478420 DAXXQ9UER7 740 aaPredicted RBP8.65□□□□□ -1.02
SMARCA1-204ENST00000478420 TMUB1Q9BVT8 246 aa8.64□□□□□ -1.03
SMARCA1-204ENST00000478420 REPIN1Q9BWE0 567 aaKnown RBP8.64□□□□□ -1.03
SMARCA1-204ENST00000478420 GOLGA8CPA6NN73 597 aa8.63□□□□□ -1.03
SMARCA1-204ENST00000478420 ZFRQ96KR1 1074 aaKnown RBP8.63□□□□□ -1.03
SMARCA1-204ENST00000478420 SLC4A3P48751 1232 aa8.62□□□□□ -1.03
SMARCA1-204ENST00000478420 SWT1Q5T5J6 900 aaKnown RBP8.62□□□□□ -1.03
SMARCA1-204ENST00000478420 SSTR3P32745 418 aaPredicted RBP8.61□□□□□ -1.03
SMARCA1-204ENST00000478420 SULF1Q8IWU6 871 aa8.61□□□□□ -1.03
SMARCA1-204ENST00000478420 FAM217BQ9NTX9 383 aaPredicted RBP8.61□□□□□ -1.03
SMARCA1-204ENST00000478420 DDX11L8A8MPP1 907 aa8.6□□□□□ -1.03
SMARCA1-204ENST00000478420 SAMD7Q7Z3H4 446 aa8.6□□□□□ -1.03
SMARCA1-204ENST00000478420 MS4A1P11836 297 aa8.59□□□□□ -1.03
SMARCA1-204ENST00000478420 RSPH4AQ5TD94 716 aa8.59□□□□□ -1.03
SMARCA1-204ENST00000478420 SLF2Q8IX21 1173 aa8.59□□□□□ -1.03
SMARCA1-204ENST00000478420 ANKK1Q8NFD2 765 aa8.59□□□□□ -1.03
SMARCA1-204ENST00000478420 DDRGK1Q96HY6 314 aa8.58□□□□□ -1.04
SMARCA1-204ENST00000478420 LRCH3Q96II8 777 aa8.58□□□□□ -1.04
SMARCA1-204ENST00000478420 RNF40O75150 1001 aa8.57□□□□□ -1.04
SMARCA1-204ENST00000478420 WNT2BQ93097 391 aa8.57□□□□□ -1.04
SMARCA1-204ENST00000478420 FAM117AQ9C073 453 aa8.57□□□□□ -1.04
SMARCA1-204ENST00000478420 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.57□□□□□ -1.04
SMARCA1-204ENST00000478420 RDH13Q8NBN7 331 aa8.56□□□□□ -1.04
SMARCA1-204ENST00000478420 IL27Q8NEV9 243 aa8.56□□□□□ -1.04
SMARCA1-204ENST00000478420 BEGAINQ9BUH8 593 aa8.56□□□□□ -1.04
SMARCA1-204ENST00000478420 CD46P15529 392 aa8.55□□□□□ -1.04
SMARCA1-204ENST00000478420 NECTIN2Q92692 538 aa8.55□□□□□ -1.04
SMARCA1-204ENST00000478420 SOWAHBA6NEL2 793 aa8.54□□□□□ -1.04
SMARCA1-204ENST00000478420 TMEM132AQ24JP5 1023 aa8.53□□□□□ -1.04
SMARCA1-204ENST00000478420 SLC10A3P09131 477 aa8.52□□□□□ -1.05
SMARCA1-204ENST00000478420 BCAMP50895 628 aa8.52□□□□□ -1.05
SMARCA1-204ENST00000478420 KCTD12Q96CX2 325 aaKnown RBP8.52□□□□□ -1.05
SMARCA1-204ENST00000478420 PLEKHG3A1L390 1219 aa8.51□□□□□ -1.05
SMARCA1-204ENST00000478420 PPP4CP60510 307 aa8.51□□□□□ -1.05
SMARCA1-204ENST00000478420 MYT1LQ9UL68 1186 aa8.51□□□□□ -1.05
SMARCA1-204ENST00000478420 HPS5Q9UPZ3 1129 aa8.51□□□□□ -1.05
SMARCA1-204ENST00000478420 GCGRP47871 477 aa8.5□□□□□ -1.05
SMARCA1-204ENST00000478420 DIXDC1Q155Q3 683 aa8.5□□□□□ -1.05
SMARCA1-204ENST00000478420 THSD4Q6ZMP0 1018 aa8.5□□□□□ -1.05
SMARCA1-204ENST00000478420 NUTM1Q86Y26 1132 aa8.5□□□□□ -1.05
SMARCA1-204ENST00000478420 TSR3Q9UJK0 312 aaKnown RBP8.5□□□□□ -1.05
SMARCA1-204ENST00000478420 CFHP08603 1231 aa8.49□□□□□ -1.05
SMARCA1-204ENST00000478420 KMT5BQ4FZB7 885 aa8.49□□□□□ -1.05
SMARCA1-204ENST00000478420 RNF166Q96A37 237 aaPredicted RBP8.49□□□□□ -1.05
SMARCA1-204ENST00000478420 RSPH6AQ9H0K4 717 aa8.49□□□□□ -1.05
SMARCA1-204ENST00000478420 KDM4AO75164 1064 aa8.48□□□□□ -1.05
SMARCA1-204ENST00000478420 PRR14Q9BWN1 585 aa8.48□□□□□ -1.05
SMARCA1-204ENST00000478420 USP46P62068 366 aa8.47□□□□□ -1.05
SMARCA1-204ENST00000478420 SPIRE2Q8WWL2 714 aa8.47□□□□□ -1.05
SMARCA1-204ENST00000478420 TBC1D2Q9BYX2 928 aa8.47□□□□□ -1.05
SMARCA1-204ENST00000478420 WBP1LQ9NX94 342 aa8.46□□□□□ -1.06
SMARCA1-204ENST00000478420 SH3D19Q5HYK7 790 aa8.45□□□□□ -1.06
SMARCA1-204ENST00000478420 GOPCQ9HD26 462 aa8.45□□□□□ -1.06
SMARCA1-204ENST00000478420 PTPN5P54829 565 aa8.44□□□□□ -1.06
SMARCA1-204ENST00000478420 GRIPAP1Q4V328 841 aa8.44□□□□□ -1.06
SMARCA1-204ENST00000478420 MYSM1Q5VVJ2 828 aa8.44□□□□□ -1.06
SMARCA1-204ENST00000478420 NYAP1Q6ZVC0 841 aa8.44□□□□□ -1.06
SMARCA1-204ENST00000478420 ACTN4O43707 911 aaKnown RBP8.43□□□□□ -1.06
SMARCA1-204ENST00000478420 APLP1P51693 650 aa8.43□□□□□ -1.06
SMARCA1-204ENST00000478420 FUT2Q10981 343 aa8.43□□□□□ -1.06
SMARCA1-204ENST00000478420 SKIV2LQ15477 1246 aaKnown RBP8.43□□□□□ -1.06
SMARCA1-204ENST00000478420 HOXA2O43364 376 aa8.42□□□□□ -1.06
SMARCA1-204ENST00000478420 ATP6V1AP38606 617 aa8.42□□□□□ -1.06
SMARCA1-204ENST00000478420 PCMTD1Q96MG8 357 aaPredicted RBP8.42□□□□□ -1.06
SMARCA1-204ENST00000478420 POLR3EQ9NVU0 708 aa8.42□□□□□ -1.06
SMARCA1-204ENST00000478420 ATP1B4Q9UN42 357 aaPredicted RBP8.42□□□□□ -1.06
SMARCA1-204ENST00000478420 MOXD2PA6NHM9 499 aa8.41□□□□□ -1.06
SMARCA1-204ENST00000478420 CLK2P49760 499 aaKnown RBP8.41□□□□□ -1.06
SMARCA1-204ENST00000478420 RIC3Q7Z5B4 369 aa8.41□□□□□ -1.06
SMARCA1-204ENST00000478420 PCDHB3Q9Y5E6 796 aa8.4□□□□□ -1.06
SMARCA1-204ENST00000478420 SPTLC1O15269 473 aa8.39□□□□□ -1.07
SMARCA1-204ENST00000478420 NDUFV2P19404 249 aa8.39□□□□□ -1.07
SMARCA1-204ENST00000478420 GJA5P36382 358 aa8.39□□□□□ -1.07
SMARCA1-204ENST00000478420 RSBN1LQ6PCB5 846 aaPredicted RBP8.39□□□□□ -1.07
SMARCA1-204ENST00000478420 FDX1P10109 184 aa8.38□□□□□ -1.07
SMARCA1-204ENST00000478420 PUS10Q3MIT2 529 aaKnown RBP8.38□□□□□ -1.07
SMARCA1-204ENST00000478420 HCSTQ9UBK5 93 aa8.38□□□□□ -1.07
SMARCA1-204ENST00000478420 MORN1Q5T089 497 aa8.37□□□□□ -1.07
SMARCA1-204ENST00000478420 HLA-CQ95604 372 aa8.37□□□□□ -1.07
SMARCA1-204ENST00000478420 LIMD1Q9UGP4 676 aa8.37□□□□□ -1.07
SMARCA1-204ENST00000478420 GUCA2AQ02747 115 aa8.36□□□□□ -1.07
SMARCA1-204ENST00000478420 TUSC1Q2TAM9 212 aa8.36□□□□□ -1.07
SMARCA1-204ENST00000478420 PROCA1Q8NCQ7 364 aaPredicted RBP8.36□□□□□ -1.07
SMARCA1-204ENST00000478420 NR1I2O75469 434 aa8.35□□□□□ -1.07
SMARCA1-204ENST00000478420 CSPP1Q1MSJ5 1256 aa8.35□□□□□ -1.07
SMARCA1-204ENST00000478420 BLOC1S3Q6QNY0 202 aa8.35□□□□□ -1.07
SMARCA1-204ENST00000478420 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.35□□□□□ -1.07
SMARCA1-204ENST00000478420 COPS2P61201 443 aa8.34□□□□□ -1.07
SMARCA1-204ENST00000478420 PCDHGC3Q9UN70 934 aa8.34□□□□□ -1.07
SMARCA1-204ENST00000478420 SLC27A5Q9Y2P5 690 aa8.34□□□□□ -1.07
SMARCA1-204ENST00000478420 PCDHB15Q9Y5E8 787 aa8.34□□□□□ -1.07
SMARCA1-204ENST00000478420 Q3C1V9 767 aa8.33□□□□□ -1.08
SMARCA1-204ENST00000478420 PRPF38BQ5VTL8 546 aaKnown RBP8.33□□□□□ -1.08
SMARCA1-204ENST00000478420 SCUBE3Q8IX30 993 aa8.33□□□□□ -1.08
SMARCA1-204ENST00000478420 NUTM2BA6NNL0 878 aaPredicted RBP8.32□□□□□ -1.08
SMARCA1-204ENST00000478420 NUTM2EB1AL46 878 aaPredicted RBP8.32□□□□□ -1.08
SMARCA1-204ENST00000478420 C6orf229H3BNL8 230 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms