RNA–Protein interactions for RNA: ENST00000476972.6

GMDS-204, Transcript of GDP-mannose 4,6-dehydratase, human

TSL 2

Gene GMDS, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GMDS-204	ENST00000476972	BCAN	Q96GW7	911 aa		29.01	■■■□□ 2.23
GMDS-204	ENST00000476972	IQGAP3	Q86VI3	1631 aa		29	■■■□□ 2.23
GMDS-204	ENST00000476972	RPRD2	Q5VT52	1461 aa	Known RBP	28.98	■■■□□ 2.23
GMDS-204	ENST00000476972		E9PCH4	1651 aa		28.94	■■■□□ 2.22
GMDS-204	ENST00000476972	KDM5A	P29375	1690 aa	Known RBP	28.94	■■■□□ 2.22
GMDS-204	ENST00000476972	FAM135B	Q49AJ0	1406 aa		28.94	■■■□□ 2.22
GMDS-204	ENST00000476972	ADGRB3	O60242	1522 aa		28.92	■■■□□ 2.22
GMDS-204	ENST00000476972	HDGF	P51858	240 aa	Known RBP	28.91	■■■□□ 2.22
GMDS-204	ENST00000476972	NAIP	Q13075	1403 aa		28.9	■■■□□ 2.22
GMDS-204	ENST00000476972	NUP155	O75694	1391 aa		28.89	■■■□□ 2.22
GMDS-204	ENST00000476972	PPP1R15A	O75807	674 aa	Predicted RBP	28.89	■■■□□ 2.22
GMDS-204	ENST00000476972	CHGA	P10645	457 aa	Known RBP	28.88	■■■□□ 2.21
GMDS-204	ENST00000476972	RGS17	Q9UGC6	210 aa	Predicted RBP	28.86	■■■□□ 2.21
GMDS-204	ENST00000476972	ZFYVE9	O95405	1425 aa		28.86	■■■□□ 2.21
GMDS-204	ENST00000476972	RIMS2	Q9UQ26	1411 aa		28.86	■■■□□ 2.21
GMDS-204	ENST00000476972	XIRP1	Q702N8	1843 aa	Known RBP	28.85	■■■□□ 2.21
GMDS-204	ENST00000476972	PLEKHG1	Q9ULL1	1385 aa		28.85	■■■□□ 2.21
GMDS-204	ENST00000476972	HFM1	A2PYH4	1435 aa		28.84	■■■□□ 2.21
GMDS-204	ENST00000476972	TBX22	Q9Y458	520 aa		28.83	■■■□□ 2.21
GMDS-204	ENST00000476972	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	28.82	■■■□□ 2.2
GMDS-204	ENST00000476972	SLAIN2	Q9P270	581 aa		28.82	■■■□□ 2.2
GMDS-204	ENST00000476972	NUTM2D	Q5VT03	806 aa	Predicted RBP	28.81	■■■□□ 2.2
GMDS-204	ENST00000476972	NKTR	P30414	1462 aa	Known RBP	28.8	■■■□□ 2.2
GMDS-204	ENST00000476972	MSH6	P52701	1360 aa		28.8	■■■□□ 2.2
GMDS-204	ENST00000476972	MYO5B	Q9ULV0	1848 aa		28.79	■■■□□ 2.2
GMDS-204	ENST00000476972	TMEM131L	A2VDJ0	1609 aa		28.76	■■■□□ 2.2
GMDS-204	ENST00000476972	SPHKAP	Q2M3C7	1700 aa		28.75	■■■□□ 2.19
GMDS-204	ENST00000476972	NWD1	Q149M9	1564 aa		28.75	■■■□□ 2.19
GMDS-204	ENST00000476972	C14orf37	Q86TY3	774 aa		28.7	■■■□□ 2.18
GMDS-204	ENST00000476972	ADAMTS13	Q76LX8	1427 aa		28.69	■■■□□ 2.18
GMDS-204	ENST00000476972	POTEA	Q6S8J7	498 aa		28.69	■■■□□ 2.18
GMDS-204	ENST00000476972	ROBO1	Q9Y6N7	1651 aa		28.69	■■■□□ 2.18
GMDS-204	ENST00000476972	NCOA3	Q9Y6Q9	1424 aa		28.66	■■■□□ 2.18
GMDS-204	ENST00000476972	C19orf44	Q9H6X5	657 aa		28.65	■■■□□ 2.18
GMDS-204	ENST00000476972	AMOTL2	Q9Y2J4	779 aa		28.64	■■■□□ 2.18
GMDS-204	ENST00000476972	PIK3R4	Q99570	1358 aa		28.63	■■■□□ 2.17
GMDS-204	ENST00000476972	CADPS2	Q86UW7	1296 aa		28.62	■■■□□ 2.17
GMDS-204	ENST00000476972	TRIM52	Q96A61	297 aa		28.62	■■■□□ 2.17
GMDS-204	ENST00000476972	TRPM2	O94759	1503 aa		28.62	■■■□□ 2.17
GMDS-204	ENST00000476972	ATF3	P18847	181 aa		28.61	■■■□□ 2.17
GMDS-204	ENST00000476972	JCAD	Q9P266	1359 aa		28.61	■■■□□ 2.17
GMDS-204	ENST00000476972	CHD2	O14647	1828 aa	Known RBP	28.6	■■■□□ 2.17
GMDS-204	ENST00000476972	CLTCL1	P53675	1640 aa		28.6	■■■□□ 2.17
GMDS-204	ENST00000476972	ZNF326	Q5BKZ1	582 aa	Known RBP	28.57	■■■□□ 2.16
GMDS-204	ENST00000476972	PTPRU	Q92729	1446 aa		28.56	■■■□□ 2.16
GMDS-204	ENST00000476972	SLC4A1AP	Q9BWU0	796 aa	Known RBP	28.53	■■■□□ 2.16
GMDS-204	ENST00000476972	DIP2A	Q14689	1571 aa		28.53	■■■□□ 2.16
GMDS-204	ENST00000476972	KIF1B	O60333	1816 aa		28.5	■■■□□ 2.15
GMDS-204	ENST00000476972	BRINP3	Q76B58	766 aa		28.49	■■■□□ 2.15
GMDS-204	ENST00000476972	PHLPP1	O60346	1717 aa		28.49	■■■□□ 2.15
GMDS-204	ENST00000476972	SETD5	Q9C0A6	1442 aa		28.48	■■■□□ 2.15
GMDS-204	ENST00000476972	SPATA31A6	Q5VVP1	1343 aa		28.47	■■■□□ 2.15
GMDS-204	ENST00000476972	MET	P08581	1390 aa		28.47	■■■□□ 2.15
GMDS-204	ENST00000476972	MEX3C	Q5U5Q3	659 aa	Known RBP	28.44	■■■□□ 2.14
GMDS-204	ENST00000476972	NEXMIF	Q5QGS0	1516 aa		28.43	■■■□□ 2.14
GMDS-204	ENST00000476972	COL16A1	Q07092	1604 aa	Predicted RBP	28.43	■■■□□ 2.14
GMDS-204	ENST00000476972	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	28.43	■■■□□ 2.14
GMDS-204	ENST00000476972	NRXN3	Q9Y4C0	1643 aa		28.41	■■■□□ 2.14
GMDS-204	ENST00000476972	FOXD1	Q16676	465 aa		28.4	■■■□□ 2.14
GMDS-204	ENST00000476972	SETBP1	Q9Y6X0	1596 aa		28.4	■■■□□ 2.14
GMDS-204	ENST00000476972	LRP6	O75581	1613 aa		28.4	■■■□□ 2.14
GMDS-204	ENST00000476972	RAB3GAP2	Q9H2M9	1393 aa		28.39	■■■□□ 2.14
GMDS-204	ENST00000476972	DCC	P43146	1447 aa		28.38	■■■□□ 2.13
GMDS-204	ENST00000476972	ZNF772	Q68DY9	489 aa	Predicted RBP	28.38	■■■□□ 2.13
GMDS-204	ENST00000476972	MPHOSPH9	Q99550	1183 aa		28.38	■■■□□ 2.13
GMDS-204	ENST00000476972	AHDC1	Q5TGY3	1603 aa	Predicted RBP	28.37	■■■□□ 2.13
GMDS-204	ENST00000476972	NUTM2B	A6NNL0	878 aa	Predicted RBP	28.36	■■■□□ 2.13
GMDS-204	ENST00000476972	NUTM2E	B1AL46	878 aa	Predicted RBP	28.36	■■■□□ 2.13
GMDS-204	ENST00000476972	NUTM2A	Q8IVF1	878 aa	Predicted RBP	28.36	■■■□□ 2.13
GMDS-204	ENST00000476972	ACIN1	Q9UKV3	1341 aa	Known RBP	28.35	■■■□□ 2.13
GMDS-204	ENST00000476972	MST1R	Q04912	1400 aa		28.34	■■■□□ 2.13
GMDS-204	ENST00000476972	VGF	O15240	615 aa	Predicted RBP	28.32	■■■□□ 2.12
GMDS-204	ENST00000476972	CCDC144A	A2RUR9	1427 aa		28.32	■■■□□ 2.12
GMDS-204	ENST00000476972	DDX17	Q92841	729 aa	Known RBP	28.31	■■■□□ 2.12
GMDS-204	ENST00000476972	LRRC59	Q96AG4	307 aa	Known RBP	28.31	■■■□□ 2.12
GMDS-204	ENST00000476972	XRN1	Q8IZH2	1706 aa	Known RBP	28.31	■■■□□ 2.12
GMDS-204	ENST00000476972	PPL	O60437	1756 aa		28.31	■■■□□ 2.12
GMDS-204	ENST00000476972	ASXL1	Q8IXJ9	1541 aa		28.28	■■■□□ 2.12
GMDS-204	ENST00000476972	ADGRL3	Q9HAR2	1447 aa		28.28	■■■□□ 2.12
GMDS-204	ENST00000476972	RXRB	P28702	533 aa		28.26	■■■□□ 2.11
GMDS-204	ENST00000476972	RPGRIP1L	Q68CZ1	1315 aa		28.25	■■■□□ 2.11
GMDS-204	ENST00000476972	SETD1A	O15047	1707 aa	Known RBP	28.23	■■■□□ 2.11
GMDS-204	ENST00000476972	SPATA31E1	Q6ZUB1	1445 aa		28.23	■■■□□ 2.11
GMDS-204	ENST00000476972	IFT172	Q9UG01	1749 aa		28.23	■■■□□ 2.11
GMDS-204	ENST00000476972	ROBO2	Q9HCK4	1378 aa		28.23	■■■□□ 2.11
GMDS-204	ENST00000476972	SHPRH	Q149N8	1683 aa		28.23	■■■□□ 2.11
GMDS-204	ENST00000476972	AFF2	P51816	1311 aa		28.21	■■■□□ 2.11
GMDS-204	ENST00000476972	UPF1	Q92900	1129 aa	Known RBP eCLIP	28.19	■■■□□ 2.1	3e-10	■■■■■ 36
GMDS-204	ENST00000476972	ORAI2	Q96SN7	254 aa		28.19	■■■□□ 2.1
GMDS-204	ENST00000476972	C1orf167	Q5SNV9	1468 aa		28.19	■■■□□ 2.1
GMDS-204	ENST00000476972	PNPLA6	Q8IY17	1366 aa		28.17	■■■□□ 2.1
GMDS-204	ENST00000476972	C8orf37	Q96NL8	207 aa		28.17	■■■□□ 2.1
GMDS-204	ENST00000476972	PTCH1	Q13635	1447 aa		28.17	■■■□□ 2.1
GMDS-204	ENST00000476972	HRC	P23327	699 aa		28.14	■■■□□ 2.1
GMDS-204	ENST00000476972	RGL3	Q3MIN7	710 aa		28.14	■■■□□ 2.1
GMDS-204	ENST00000476972	QTRT2	Q9H974	415 aa	Known RBP	28.14	■■■□□ 2.1
GMDS-204	ENST00000476972	ADAMTS2	O95450	1211 aa		28.12	■■■□□ 2.09
GMDS-204	ENST00000476972	NHSL1	Q5SYE7	1610 aa		28.11	■■■□□ 2.09
GMDS-204	ENST00000476972	SOS2	Q07890	1332 aa	Predicted RBP	28.11	■■■□□ 2.09
GMDS-204	ENST00000476972	NGLY1	Q96IV0	654 aa		28.1	■■■□□ 2.09

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