RNA–Protein interactions for RNA: ENST00000474414.5

BSDC1-208, Transcript of BSD domain containing 1, human

TSL 5

Gene BSDC1, Length 978 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BSDC1-208	ENST00000474414	GCC2	Q8IWJ2	1684 aa		33.09	■■■□□ 2.89
BSDC1-208	ENST00000474414	PROSER2	Q86WR7	435 aa	Predicted RBP	33.08	■■■□□ 2.89
BSDC1-208	ENST00000474414	PLEKHG1	Q9ULL1	1385 aa		33.07	■■■□□ 2.88
BSDC1-208	ENST00000474414	RIMS2	Q9UQ26	1411 aa		33.06	■■■□□ 2.88
BSDC1-208	ENST00000474414	FAM135B	Q49AJ0	1406 aa		33.04	■■■□□ 2.88
BSDC1-208	ENST00000474414	TMEM131L	A2VDJ0	1609 aa		33.04	■■■□□ 2.88
BSDC1-208	ENST00000474414	NKTR	P30414	1462 aa	Known RBP	33.04	■■■□□ 2.88
BSDC1-208	ENST00000474414	PPP1R15A	O75807	674 aa	Predicted RBP	33.03	■■■□□ 2.88
BSDC1-208	ENST00000474414	NWD1	Q149M9	1564 aa		33.03	■■■□□ 2.88
BSDC1-208	ENST00000474414	ITGAE	P38570	1179 aa		33.02	■■■□□ 2.88
BSDC1-208	ENST00000474414	PHF23	Q9BUL5	403 aa	Predicted RBP	33.02	■■■□□ 2.88
BSDC1-208	ENST00000474414	NUP155	O75694	1391 aa		33.01	■■■□□ 2.88
BSDC1-208	ENST00000474414	IQGAP3	Q86VI3	1631 aa		33.01	■■■□□ 2.87
BSDC1-208	ENST00000474414		E9PCH4	1651 aa		33.01	■■■□□ 2.87
BSDC1-208	ENST00000474414	CHGA	P10645	457 aa	Known RBP	33	■■■□□ 2.87
BSDC1-208	ENST00000474414	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	33	■■■□□ 2.87
BSDC1-208	ENST00000474414	RBM33	Q96EV2	1170 aa	Known RBP	33	■■■□□ 2.87
BSDC1-208	ENST00000474414	PPARGC1B	Q86YN6	1023 aa	Known RBP	32.99	■■■□□ 2.87
BSDC1-208	ENST00000474414	MYO5B	Q9ULV0	1848 aa		32.99	■■■□□ 2.87
BSDC1-208	ENST00000474414	TBX22	Q9Y458	520 aa		32.96	■■■□□ 2.87
BSDC1-208	ENST00000474414	MSH6	P52701	1360 aa		32.93	■■■□□ 2.86
BSDC1-208	ENST00000474414	CHD2	O14647	1828 aa	Known RBP	32.88	■■■□□ 2.85
BSDC1-208	ENST00000474414	NUTM2D	Q5VT03	806 aa	Predicted RBP	32.88	■■■□□ 2.85
BSDC1-208	ENST00000474414	ADAMTS13	Q76LX8	1427 aa		32.87	■■■□□ 2.85
BSDC1-208	ENST00000474414	ROBO1	Q9Y6N7	1651 aa		32.85	■■■□□ 2.85
BSDC1-208	ENST00000474414	SLAIN2	Q9P270	581 aa		32.85	■■■□□ 2.85
BSDC1-208	ENST00000474414	NCOA3	Q9Y6Q9	1424 aa		32.84	■■■□□ 2.85
BSDC1-208	ENST00000474414	PIK3R4	Q99570	1358 aa		32.83	■■■□□ 2.85
BSDC1-208	ENST00000474414	DIP2A	Q14689	1571 aa		32.83	■■■□□ 2.85
BSDC1-208	ENST00000474414	RRBP1	Q9P2E9	1410 aa	Known RBP	32.79	■■■□□ 2.84
BSDC1-208	ENST00000474414	RGS17	Q9UGC6	210 aa	Predicted RBP	32.77	■■■□□ 2.84
BSDC1-208	ENST00000474414	C14orf37	Q86TY3	774 aa		32.74	■■■□□ 2.83
BSDC1-208	ENST00000474414	TRPM2	O94759	1503 aa		32.73	■■■□□ 2.83
BSDC1-208	ENST00000474414	SPHKAP	Q2M3C7	1700 aa		32.72	■■■□□ 2.83
BSDC1-208	ENST00000474414	C19orf44	Q9H6X5	657 aa		32.72	■■■□□ 2.83
BSDC1-208	ENST00000474414	AMOTL2	Q9Y2J4	779 aa		32.71	■■■□□ 2.83
BSDC1-208	ENST00000474414	NAIP	Q13075	1403 aa		32.7	■■■□□ 2.83
BSDC1-208	ENST00000474414	CADPS2	Q86UW7	1296 aa		32.7	■■■□□ 2.83
BSDC1-208	ENST00000474414	PTPRU	Q92729	1446 aa		32.69	■■■□□ 2.82
BSDC1-208	ENST00000474414	ZNF326	Q5BKZ1	582 aa	Known RBP	32.69	■■■□□ 2.82
BSDC1-208	ENST00000474414	ATF3	P18847	181 aa		32.66	■■■□□ 2.82
BSDC1-208	ENST00000474414	SETBP1	Q9Y6X0	1596 aa		32.66	■■■□□ 2.82
BSDC1-208	ENST00000474414	JCAD	Q9P266	1359 aa		32.65	■■■□□ 2.82
BSDC1-208	ENST00000474414	PHLPP1	O60346	1717 aa		32.65	■■■□□ 2.82
BSDC1-208	ENST00000474414	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	32.63	■■■□□ 2.81
BSDC1-208	ENST00000474414	NRXN3	Q9Y4C0	1643 aa		32.62	■■■□□ 2.81
BSDC1-208	ENST00000474414	CLTCL1	P53675	1640 aa		32.59	■■■□□ 2.81
BSDC1-208	ENST00000474414	POTEA	Q6S8J7	498 aa		32.58	■■■□□ 2.81
BSDC1-208	ENST00000474414	COL16A1	Q07092	1604 aa	Predicted RBP	32.57	■■■□□ 2.8
BSDC1-208	ENST00000474414	HFM1	A2PYH4	1435 aa		32.57	■■■□□ 2.8
BSDC1-208	ENST00000474414	MET	P08581	1390 aa		32.57	■■■□□ 2.8
BSDC1-208	ENST00000474414	DCC	P43146	1447 aa		32.56	■■■□□ 2.8
BSDC1-208	ENST00000474414	XRN1	Q8IZH2	1706 aa	Known RBP	32.56	■■■□□ 2.8
BSDC1-208	ENST00000474414	TRIM52	Q96A61	297 aa		32.55	■■■□□ 2.8
BSDC1-208	ENST00000474414	NEXMIF	Q5QGS0	1516 aa		32.55	■■■□□ 2.8
BSDC1-208	ENST00000474414	AHDC1	Q5TGY3	1603 aa	Predicted RBP	32.53	■■■□□ 2.8
BSDC1-208	ENST00000474414	BRINP3	Q76B58	766 aa		32.51	■■■□□ 2.79
BSDC1-208	ENST00000474414	SPATA31A6	Q5VVP1	1343 aa		32.5	■■■□□ 2.79
BSDC1-208	ENST00000474414	SLC4A1AP	Q9BWU0	796 aa	Known RBP	32.48	■■■□□ 2.79
BSDC1-208	ENST00000474414	KIF1B	O60333	1816 aa		32.47	■■■□□ 2.79
BSDC1-208	ENST00000474414	VGF	O15240	615 aa	Predicted RBP	32.46	■■■□□ 2.79
BSDC1-208	ENST00000474414	MST1R	Q04912	1400 aa		32.43	■■■□□ 2.78
BSDC1-208	ENST00000474414	RPGRIP1L	Q68CZ1	1315 aa		32.43	■■■□□ 2.78
BSDC1-208	ENST00000474414	ADGRL3	Q9HAR2	1447 aa		32.43	■■■□□ 2.78
BSDC1-208	ENST00000474414	LRP6	O75581	1613 aa		32.41	■■■□□ 2.78
BSDC1-208	ENST00000474414	ASXL1	Q8IXJ9	1541 aa		32.41	■■■□□ 2.78
BSDC1-208	ENST00000474414	SHPRH	Q149N8	1683 aa		32.38	■■■□□ 2.77
BSDC1-208	ENST00000474414	MEX3C	Q5U5Q3	659 aa	Known RBP	32.38	■■■□□ 2.77
BSDC1-208	ENST00000474414	PTCH1	Q13635	1447 aa		32.34	■■■□□ 2.77
BSDC1-208	ENST00000474414	SETD5	Q9C0A6	1442 aa		32.34	■■■□□ 2.77
BSDC1-208	ENST00000474414	ZNF772	Q68DY9	489 aa	Predicted RBP	32.32	■■■□□ 2.76
BSDC1-208	ENST00000474414	NALCN	Q8IZF0	1738 aa		32.31	■■■□□ 2.76
BSDC1-208	ENST00000474414	SETD1A	O15047	1707 aa	Known RBP	32.3	■■■□□ 2.76
BSDC1-208	ENST00000474414	FOXD1	Q16676	465 aa		32.3	■■■□□ 2.76
BSDC1-208	ENST00000474414	PRAG1	Q86YV5	1406 aa		32.3	■■■□□ 2.76
BSDC1-208	ENST00000474414	LRRC59	Q96AG4	307 aa	Known RBP	32.3	■■■□□ 2.76
BSDC1-208	ENST00000474414	ROBO2	Q9HCK4	1378 aa		32.3	■■■□□ 2.76
BSDC1-208	ENST00000474414	NHSL1	Q5SYE7	1610 aa		32.29	■■■□□ 2.76
BSDC1-208	ENST00000474414	NUTM2B	A6NNL0	878 aa	Predicted RBP	32.27	■■■□□ 2.76
BSDC1-208	ENST00000474414	NUTM2E	B1AL46	878 aa	Predicted RBP	32.27	■■■□□ 2.76
BSDC1-208	ENST00000474414	NUTM2A	Q8IVF1	878 aa	Predicted RBP	32.27	■■■□□ 2.76
BSDC1-208	ENST00000474414	C1orf167	Q5SNV9	1468 aa		32.26	■■■□□ 2.75
BSDC1-208	ENST00000474414	PPL	O60437	1756 aa		32.25	■■■□□ 2.75
BSDC1-208	ENST00000474414	DDX17	Q92841	729 aa	Known RBP	32.25	■■■□□ 2.75
BSDC1-208	ENST00000474414	CCDC144A	A2RUR9	1427 aa		32.24	■■■□□ 2.75
BSDC1-208	ENST00000474414	MPHOSPH9	Q99550	1183 aa		32.23	■■■□□ 2.75
BSDC1-208	ENST00000474414	ADGRF5	Q8IZF2	1346 aa		32.19	■■■□□ 2.74
BSDC1-208	ENST00000474414	PNPLA6	Q8IY17	1366 aa		32.19	■■■□□ 2.74
BSDC1-208	ENST00000474414	SPATA31E1	Q6ZUB1	1445 aa		32.17	■■■□□ 2.74
BSDC1-208	ENST00000474414	RGL3	Q3MIN7	710 aa		32.17	■■■□□ 2.74
BSDC1-208	ENST00000474414	ORAI2	Q96SN7	254 aa		32.17	■■■□□ 2.74
BSDC1-208	ENST00000474414	ANKRD30B	Q9BXX2	1392 aa		32.16	■■■□□ 2.74
BSDC1-208	ENST00000474414	RXRB	P28702	533 aa		32.15	■■■□□ 2.74
BSDC1-208	ENST00000474414	AFF2	P51816	1311 aa		32.15	■■■□□ 2.74
BSDC1-208	ENST00000474414	LAMC1	P11047	1609 aa		32.13	■■■□□ 2.73
BSDC1-208	ENST00000474414	SOS2	Q07890	1332 aa	Predicted RBP	32.13	■■■□□ 2.73
BSDC1-208	ENST00000474414	ACIN1	Q9UKV3	1341 aa	Known RBP	32.13	■■■□□ 2.73
BSDC1-208	ENST00000474414	C8orf37	Q96NL8	207 aa		32.08	■■■□□ 2.73
BSDC1-208	ENST00000474414	TECPR2	O15040	1411 aa		32.08	■■■□□ 2.73
BSDC1-208	ENST00000474414	STK26	Q9P289	416 aa		32.07	■■■□□ 2.72

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms