RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 PCDHB3Q9Y5E6 796 aa10.05□□□□□ -0.8
TMEM50B-208ENST00000474272 ZPR1O75312 459 aa10.04□□□□□ -0.8
TMEM50B-208ENST00000474272 NECTIN2Q92692 538 aa10.04□□□□□ -0.8
TMEM50B-208ENST00000474272 GFRA3O60609 400 aa10.03□□□□□ -0.8
TMEM50B-208ENST00000474272 FECHP22830 423 aa10.03□□□□□ -0.8
TMEM50B-208ENST00000474272 TESPA1A2RU30 521 aaPredicted RBP10.02□□□□□ -0.81
TMEM50B-208ENST00000474272 SLC10A3P09131 477 aa10.02□□□□□ -0.81
TMEM50B-208ENST00000474272 TLL1O43897 1013 aa10.01□□□□□ -0.81
TMEM50B-208ENST00000474272 HAP1P54257 671 aaPredicted RBP10.01□□□□□ -0.81
TMEM50B-208ENST00000474272 CFHP08603 1231 aa10□□□□□ -0.81
TMEM50B-208ENST00000474272 PXYLP1Q8TE99 480 aa9.99□□□□□ -0.81
TMEM50B-208ENST00000474272 LCE2BO14633 110 aa9.98□□□□□ -0.81
TMEM50B-208ENST00000474272 NLRP7Q8WX94 980 aa9.98□□□□□ -0.81
TMEM50B-208ENST00000474272 PRR14Q9BWN1 585 aa9.98□□□□□ -0.81
TMEM50B-208ENST00000474272 PPEF1O14829 653 aaPredicted RBP9.97□□□□□ -0.81
TMEM50B-208ENST00000474272 HIC1Q14526 733 aa9.97□□□□□ -0.81
TMEM50B-208ENST00000474272 KDM2AQ9Y2K7 1162 aa9.97□□□□□ -0.81
TMEM50B-208ENST00000474272 V9GY48 417 aaPredicted RBP9.97□□□□□ -0.81
TMEM50B-208ENST00000474272 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.96□□□□□ -0.82
TMEM50B-208ENST00000474272 ACTN4O43707 911 aaKnown RBP9.96□□□□□ -0.82
TMEM50B-208ENST00000474272 OATP04181 439 aa9.96□□□□□ -0.82
TMEM50B-208ENST00000474272 GGCXP38435 758 aa9.96□□□□□ -0.82
TMEM50B-208ENST00000474272 KMT5BQ4FZB7 885 aa9.96□□□□□ -0.82
TMEM50B-208ENST00000474272 METTL3Q86U44 580 aaKnown RBP9.96□□□□□ -0.82
TMEM50B-208ENST00000474272 RNF223E7ERA6 249 aa9.95□□□□□ -0.82
TMEM50B-208ENST00000474272 GPR37O15354 613 aa9.94□□□□□ -0.82
TMEM50B-208ENST00000474272 PUS10Q3MIT2 529 aaKnown RBP9.94□□□□□ -0.82
TMEM50B-208ENST00000474272 SMYD5Q6GMV2 418 aa9.94□□□□□ -0.82
TMEM50B-208ENST00000474272 GNPATO15228 680 aa9.93□□□□□ -0.82
TMEM50B-208ENST00000474272 LAPTM4AQ15012 233 aa9.93□□□□□ -0.82
TMEM50B-208ENST00000474272 EMID1Q96A84 441 aaPredicted RBP9.93□□□□□ -0.82
TMEM50B-208ENST00000474272 TMUB1Q9BVT8 246 aa9.93□□□□□ -0.82
TMEM50B-208ENST00000474272 S1PR4O95977 384 aa9.92□□□□□ -0.82
TMEM50B-208ENST00000474272 TRAF7Q6Q0C0 670 aa9.92□□□□□ -0.82
TMEM50B-208ENST00000474272 PDZRN3Q9UPQ7 1066 aa9.92□□□□□ -0.82
TMEM50B-208ENST00000474272 NRG2O14511 850 aaPredicted RBP9.9□□□□□ -0.82
TMEM50B-208ENST00000474272 SLC19A1P41440 591 aa9.9□□□□□ -0.82
TMEM50B-208ENST00000474272 PHOX2BQ99453 314 aa9.9□□□□□ -0.82
TMEM50B-208ENST00000474272 SCUBE3Q8IX30 993 aa9.89□□□□□ -0.83
TMEM50B-208ENST00000474272 RDH13Q8NBN7 331 aa9.88□□□□□ -0.83
TMEM50B-208ENST00000474272 DDX11L8A8MPP1 907 aa9.87□□□□□ -0.83
TMEM50B-208ENST00000474272 NR1I2O75469 434 aa9.87□□□□□ -0.83
TMEM50B-208ENST00000474272 ADH1BP00325 375 aa9.86□□□□□ -0.83
TMEM50B-208ENST00000474272 LIAT1Q6ZQX7 453 aa9.86□□□□□ -0.83
TMEM50B-208ENST00000474272 DAXXQ9UER7 740 aaPredicted RBP9.86□□□□□ -0.83
TMEM50B-208ENST00000474272 RSPH4AQ5TD94 716 aa9.85□□□□□ -0.83
TMEM50B-208ENST00000474272 TRIM67Q6ZTA4 783 aa9.85□□□□□ -0.83
TMEM50B-208ENST00000474272 GPIHBP1Q8IV16 184 aa9.85□□□□□ -0.83
TMEM50B-208ENST00000474272 PLA2G2CQ5R387 149 aa9.84□□□□□ -0.83
TMEM50B-208ENST00000474272 ANKLE1Q8NAG6 615 aa9.84□□□□□ -0.83
TMEM50B-208ENST00000474272 SLC6A16Q9GZN6 736 aa9.84□□□□□ -0.83
TMEM50B-208ENST00000474272 FUT2Q10981 343 aa9.83□□□□□ -0.84
TMEM50B-208ENST00000474272 SPRYD7Q5W111 196 aa9.83□□□□□ -0.84
TMEM50B-208ENST00000474272 SPSB2Q99619 263 aa9.82□□□□□ -0.84
TMEM50B-208ENST00000474272 MORN1Q5T089 497 aa9.8□□□□□ -0.84
TMEM50B-208ENST00000474272 ZNF697Q5TEC3 545 aa9.79□□□□□ -0.84
TMEM50B-208ENST00000474272 ZNF598Q86UK7 904 aaKnown RBP9.79□□□□□ -0.84
TMEM50B-208ENST00000474272 TNFRSF10AO00220 468 aa9.78□□□□□ -0.84
TMEM50B-208ENST00000474272 GCGRP47871 477 aa9.78□□□□□ -0.84
TMEM50B-208ENST00000474272 SLC27A5Q9Y2P5 690 aa9.78□□□□□ -0.84
TMEM50B-208ENST00000474272 ATP6V1AP38606 617 aa9.77□□□□□ -0.85
TMEM50B-208ENST00000474272 FAM160A2Q8N612 972 aaPredicted RBP9.76□□□□□ -0.85
TMEM50B-208ENST00000474272 THAP11Q96EK4 314 aa9.76□□□□□ -0.85
TMEM50B-208ENST00000474272 SULF1Q8IWU6 871 aa9.75□□□□□ -0.85
TMEM50B-208ENST00000474272 PRDM9Q9NQV7 894 aa9.74□□□□□ -0.85
TMEM50B-208ENST00000474272 GDF9O60383 454 aa9.73□□□□□ -0.85
TMEM50B-208ENST00000474272 FOXC1Q12948 553 aa9.73□□□□□ -0.85
TMEM50B-208ENST00000474272 ZNF787Q6DD87 383 aa9.73□□□□□ -0.85
TMEM50B-208ENST00000474272 FCF1Q9Y324 198 aaKnown RBP9.73□□□□□ -0.85
TMEM50B-208ENST00000474272 FMNL1O95466 1100 aaPredicted RBP9.72□□□□□ -0.85
TMEM50B-208ENST00000474272 PKDCCQ504Y2 493 aa9.72□□□□□ -0.85
TMEM50B-208ENST00000474272 RNF19BQ6ZMZ0 732 aa9.72□□□□□ -0.85
TMEM50B-208ENST00000474272 VSIG10Q8N0Z9 540 aa9.72□□□□□ -0.85
TMEM50B-208ENST00000474272 FAM187AA6NFU0 413 aa9.71□□□□□ -0.86
TMEM50B-208ENST00000474272 IRF6O14896 467 aa9.71□□□□□ -0.86
TMEM50B-208ENST00000474272 MDM2Q00987 491 aaPredicted RBP9.71□□□□□ -0.86
TMEM50B-208ENST00000474272 MAP2K5Q13163 448 aa9.71□□□□□ -0.86
TMEM50B-208ENST00000474272 PRR20EP86478 221 aa9.7□□□□□ -0.86
TMEM50B-208ENST00000474272 PRR20CP86479 221 aa9.7□□□□□ -0.86
TMEM50B-208ENST00000474272 PRR20DP86480 221 aa9.7□□□□□ -0.86
TMEM50B-208ENST00000474272 PRR20BP86481 221 aa9.7□□□□□ -0.86
TMEM50B-208ENST00000474272 PRR20AP86496 221 aa9.7□□□□□ -0.86
TMEM50B-208ENST00000474272 MYT1Q01538 1121 aa9.7□□□□□ -0.86
TMEM50B-208ENST00000474272 BRICD5Q6PL45 260 aa9.7□□□□□ -0.86
TMEM50B-208ENST00000474272 HLA-CQ95604 372 aa9.69□□□□□ -0.86
TMEM50B-208ENST00000474272 PKD2L1Q9P0L9 805 aa9.69□□□□□ -0.86
TMEM50B-208ENST00000474272 POTECB2RU33 542 aa9.68□□□□□ -0.86
TMEM50B-208ENST00000474272 CD46P15529 392 aa9.68□□□□□ -0.86
TMEM50B-208ENST00000474272 DGAT1O75907 488 aa9.67□□□□□ -0.86
TMEM50B-208ENST00000474272 TULP1O00294 542 aaPredicted RBP9.66□□□□□ -0.86
TMEM50B-208ENST00000474272 CCDC102AQ96A19 550 aa9.66□□□□□ -0.86
TMEM50B-208ENST00000474272 ST8SIA5O15466 376 aa9.65□□□□□ -0.86
TMEM50B-208ENST00000474272 SALL2Q9Y467 1007 aaPredicted RBP9.65□□□□□ -0.86
TMEM50B-208ENST00000474272 MINK1Q8N4C8 1332 aaPredicted RBP9.64□□□□□ -0.87
TMEM50B-208ENST00000474272 KDM4AO75164 1064 aa9.64□□□□□ -0.87
TMEM50B-208ENST00000474272 RPIAP49247 311 aa9.64□□□□□ -0.87
TMEM50B-208ENST00000474272 GRIPAP1Q4V328 841 aa9.64□□□□□ -0.87
TMEM50B-208ENST00000474272 CD2BP2O95400 341 aaKnown RBP9.63□□□□□ -0.87
TMEM50B-208ENST00000474272 GUCA2AQ02747 115 aa9.63□□□□□ -0.87
TMEM50B-208ENST00000474272 ZNF775Q96BV0 537 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms