RNA–Protein interactions for RNA: ENST00000474171.1

RPL13A-205, Transcript of ribosomal protein L13a, humanhuman

TSL 2

Gene RPL13A, Length 521 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-205ENST00000474171 TOM1O60784 492 aa17.13■□□□□ 0.33
RPL13A-205ENST00000474171 SLC26A8Q96RN1 970 aa17.13■□□□□ 0.33
RPL13A-205ENST00000474171 HSPA1LP34931 641 aa17.12■□□□□ 0.33
RPL13A-205ENST00000474171 CHD2O14647 1828 aaKnown RBP17.11■□□□□ 0.33
RPL13A-205ENST00000474171 RIMS2Q9UQ26 1411 aa17.11■□□□□ 0.33
RPL13A-205ENST00000474171 NAIPQ13075 1403 aa17.1■□□□□ 0.33
RPL13A-205ENST00000474171 NWD1Q149M9 1564 aa17.1■□□□□ 0.33
RPL13A-205ENST00000474171 ILDR2Q71H61 639 aa17.09■□□□□ 0.33
RPL13A-205ENST00000474171 CHGAP10645 457 aaKnown RBP17.08■□□□□ 0.32
RPL13A-205ENST00000474171 NUTM2DQ5VT03 806 aaPredicted RBP17.07■□□□□ 0.32
RPL13A-205ENST00000474171 RBM33Q96EV2 1170 aaKnown RBP17.07■□□□□ 0.32
RPL13A-205ENST00000474171 PLEKHG1Q9ULL1 1385 aa17.06■□□□□ 0.32
RPL13A-205ENST00000474171 KCNA6P17658 529 aa17.06■□□□□ 0.32
RPL13A-205ENST00000474171 BCANQ96GW7 911 aa17.05■□□□□ 0.32
RPL13A-205ENST00000474171 CLTCL1P53675 1640 aa17.05■□□□□ 0.32
RPL13A-205ENST00000474171 TMEM94Q12767 1356 aa17.04■□□□□ 0.32
RPL13A-205ENST00000474171 ADAMTS13Q76LX8 1427 aa17.03■□□□□ 0.32
RPL13A-205ENST00000474171 MED1Q15648 1581 aaPredicted RBP17.02■□□□□ 0.32
RPL13A-205ENST00000474171 NKTRP30414 1462 aaKnown RBP17.02■□□□□ 0.32
RPL13A-205ENST00000474171 PPP1R15AO75807 674 aaPredicted RBP17.02■□□□□ 0.32
RPL13A-205ENST00000474171 NRXN3Q9Y4C0 1643 aa17.02■□□□□ 0.31
RPL13A-205ENST00000474171 KIF1BO60333 1816 aa17.01■□□□□ 0.31
RPL13A-205ENST00000474171 PROSER2Q86WR7 435 aaPredicted RBP17.01■□□□□ 0.31
RPL13A-205ENST00000474171 HFM1A2PYH4 1435 aa17.01■□□□□ 0.31
RPL13A-205ENST00000474171 ROBO1Q9Y6N7 1651 aa16.99■□□□□ 0.31
RPL13A-205ENST00000474171 TRPM2O94759 1503 aa16.99■□□□□ 0.31
RPL13A-205ENST00000474171 DIP2AQ14689 1571 aa16.98■□□□□ 0.31
RPL13A-205ENST00000474171 HDGFP51858 240 aaKnown RBP16.98■□□□□ 0.31
RPL13A-205ENST00000474171 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.98■□□□□ 0.31
RPL13A-205ENST00000474171 TBX22Q9Y458 520 aa16.98■□□□□ 0.31
RPL13A-205ENST00000474171 NEXMIFQ5QGS0 1516 aa16.96■□□□□ 0.3
RPL13A-205ENST00000474171 PTPRUQ92729 1446 aa16.96■□□□□ 0.3
RPL13A-205ENST00000474171 TRIM52Q96A61 297 aa16.95■□□□□ 0.3
RPL13A-205ENST00000474171 SETBP1Q9Y6X0 1596 aa16.94■□□□□ 0.3
RPL13A-205ENST00000474171 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.94■□□□□ 0.3
RPL13A-205ENST00000474171 XRN1Q8IZH2 1706 aaKnown RBP16.93■□□□□ 0.3
RPL13A-205ENST00000474171 FAM135BQ49AJ0 1406 aa16.93■□□□□ 0.3
RPL13A-205ENST00000474171 ZNF326Q5BKZ1 582 aaKnown RBP16.92■□□□□ 0.3
RPL13A-205ENST00000474171 MSH6P52701 1360 aa16.91■□□□□ 0.3
RPL13A-205ENST00000474171 SETD1AO15047 1707 aaKnown RBP16.9■□□□□ 0.3
RPL13A-205ENST00000474171 PIK3R4Q99570 1358 aa16.89■□□□□ 0.3
RPL13A-205ENST00000474171 PPLO60437 1756 aa16.89■□□□□ 0.3
RPL13A-205ENST00000474171 FOXD1Q16676 465 aa16.89■□□□□ 0.29
RPL13A-205ENST00000474171 SLC4A1APQ9BWU0 796 aaKnown RBP16.89■□□□□ 0.29
RPL13A-205ENST00000474171 PHLPP1O60346 1717 aa16.89■□□□□ 0.29
RPL13A-205ENST00000474171 METP08581 1390 aa16.89■□□□□ 0.29
RPL13A-205ENST00000474171 AMOTL2Q9Y2J4 779 aa16.88■□□□□ 0.29
RPL13A-205ENST00000474171 SOCS7O14512 581 aa16.86■□□□□ 0.29
RPL13A-205ENST00000474171 SLAIN2Q9P270 581 aa16.86■□□□□ 0.29
RPL13A-205ENST00000474171 NCOA3Q9Y6Q9 1424 aa16.86■□□□□ 0.29
RPL13A-205ENST00000474171 NALCNQ8IZF0 1738 aa16.84■□□□□ 0.29
RPL13A-205ENST00000474171 COL16A1Q07092 1604 aaPredicted RBP16.83■□□□□ 0.28
RPL13A-205ENST00000474171 C14orf37Q86TY3 774 aa16.83■□□□□ 0.28
RPL13A-205ENST00000474171 IFT172Q9UG01 1749 aa16.83■□□□□ 0.28
RPL13A-205ENST00000474171 C19orf44Q9H6X5 657 aa16.81■□□□□ 0.28
RPL13A-205ENST00000474171 MPHOSPH9Q99550 1183 aa16.8■□□□□ 0.28
RPL13A-205ENST00000474171 PHF23Q9BUL5 403 aaPredicted RBP16.79■□□□□ 0.28
RPL13A-205ENST00000474171 RGS17Q9UGC6 210 aaPredicted RBP16.79■□□□□ 0.28
RPL13A-205ENST00000474171 AHDC1Q5TGY3 1603 aaPredicted RBP16.78■□□□□ 0.28
RPL13A-205ENST00000474171 ATF3P18847 181 aa16.77■□□□□ 0.28
RPL13A-205ENST00000474171 CADPS2Q86UW7 1296 aa16.77■□□□□ 0.28
RPL13A-205ENST00000474171 SPATA31E1Q6ZUB1 1445 aa16.77■□□□□ 0.27
RPL13A-205ENST00000474171 SETD5Q9C0A6 1442 aa16.77■□□□□ 0.27
RPL13A-205ENST00000474171 VGFO15240 615 aaPredicted RBP16.76■□□□□ 0.27
RPL13A-205ENST00000474171 CCDC144AA2RUR9 1427 aa16.76■□□□□ 0.27
RPL13A-205ENST00000474171 MST1RQ04912 1400 aa16.76■□□□□ 0.27
RPL13A-205ENST00000474171 RPGRIP1LQ68CZ1 1315 aa16.75■□□□□ 0.27
RPL13A-205ENST00000474171 DCCP43146 1447 aa16.75■□□□□ 0.27
RPL13A-205ENST00000474171 ADGRL3Q9HAR2 1447 aa16.75■□□□□ 0.27
RPL13A-205ENST00000474171 NHSL1Q5SYE7 1610 aa16.74■□□□□ 0.27
RPL13A-205ENST00000474171 ADGRF5Q8IZF2 1346 aa16.74■□□□□ 0.27
RPL13A-205ENST00000474171 RGL3Q3MIN7 710 aa16.74■□□□□ 0.27
RPL13A-205ENST00000474171 BRINP3Q76B58 766 aa16.74■□□□□ 0.27
RPL13A-205ENST00000474171 ROBO2Q9HCK4 1378 aa16.74■□□□□ 0.27
RPL13A-205ENST00000474171 SHPRHQ149N8 1683 aa16.73■□□□□ 0.27
RPL13A-205ENST00000474171 ASXL1Q8IXJ9 1541 aa16.73■□□□□ 0.27
RPL13A-205ENST00000474171 RAB3GAP2Q9H2M9 1393 aa16.73■□□□□ 0.27
RPL13A-205ENST00000474171 JCADQ9P266 1359 aa16.72■□□□□ 0.27
RPL13A-205ENST00000474171 PTCH1Q13635 1447 aa16.71■□□□□ 0.27
RPL13A-205ENST00000474171 LRP6O75581 1613 aa16.71■□□□□ 0.27
RPL13A-205ENST00000474171 PRAG1Q86YV5 1406 aa16.7■□□□□ 0.26
RPL13A-205ENST00000474171 POTEAQ6S8J7 498 aa16.68■□□□□ 0.26
RPL13A-205ENST00000474171 DDX17Q92841 729 aaKnown RBP16.68■□□□□ 0.26
RPL13A-205ENST00000474171 KNDC1Q76NI1 1749 aa16.67■□□□□ 0.26
RPL13A-205ENST00000474171 PIK3C2GO75747 1445 aa16.66■□□□□ 0.26
RPL13A-205ENST00000474171 C1orf167Q5SNV9 1468 aa16.66■□□□□ 0.26
RPL13A-205ENST00000474171 ANKRD30BQ9BXX2 1392 aa16.65■□□□□ 0.26
RPL13A-205ENST00000474171 TMEM132EQ6IEE7 984 aa16.65■□□□□ 0.26
RPL13A-205ENST00000474171 LAMC1P11047 1609 aa16.64■□□□□ 0.25
RPL13A-205ENST00000474171 STK26Q9P289 416 aa16.63■□□□□ 0.25
RPL13A-205ENST00000474171 ORAI2Q96SN7 254 aa16.62■□□□□ 0.25
RPL13A-205ENST00000474171 CDC42BPGQ6DT37 1551 aa16.62■□□□□ 0.25
RPL13A-205ENST00000474171 SPATA31A6Q5VVP1 1343 aa16.62■□□□□ 0.25
RPL13A-205ENST00000474171 PLEKHH1Q9ULM0 1364 aa16.62■□□□□ 0.25
RPL13A-205ENST00000474171 TECPR2O15040 1411 aa16.62■□□□□ 0.25
RPL13A-205ENST00000474171 NRXN1Q9ULB1 1477 aa16.61■□□□□ 0.25
RPL13A-205ENST00000474171 WAPLQ7Z5K2 1190 aa16.61■□□□□ 0.25
RPL13A-205ENST00000474171 LRPPRCP42704 1394 aaKnown RBP16.61■□□□□ 0.25
RPL13A-205ENST00000474171 RGPD8O14715 1765 aaPredicted RBP16.61■□□□□ 0.25
RPL13A-205ENST00000474171 ACIN1Q9UKV3 1341 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms