RNA–Protein interactions for RNA: ENST00000473949.5

ARF1-206, Transcript of ADP ribosylation factor 1, humanhuman

TSL 5

Gene ARF1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-206ENST00000473949 PPP1R15AO75807 674 aaPredicted RBP31.73■■■□□ 2.67
ARF1-206ENST00000473949 CHGAP10645 457 aaKnown RBP31.73■■■□□ 2.67
ARF1-206ENST00000473949 MYO5BQ9ULV0 1848 aa31.71■■■□□ 2.67
ARF1-206ENST00000473949 TMEM94Q12767 1356 aa31.7■■■□□ 2.67
ARF1-206ENST00000473949 HDGFP51858 240 aaKnown RBP31.7■■■□□ 2.67
ARF1-206ENST00000473949 PROSER2Q86WR7 435 aaPredicted RBP31.7■■■□□ 2.67
ARF1-206ENST00000473949 RIMS2Q9UQ26 1411 aa31.69■■■□□ 2.66
ARF1-206ENST00000473949 E9PCH4 1651 aa31.69■■■□□ 2.66
ARF1-206ENST00000473949 IQGAP3Q86VI3 1631 aa31.68■■■□□ 2.66
ARF1-206ENST00000473949 NUP155O75694 1391 aa31.68■■■□□ 2.66
ARF1-206ENST00000473949 TMEM131LA2VDJ0 1609 aa31.67■■■□□ 2.66
ARF1-206ENST00000473949 ZFYVE9O95405 1425 aa31.67■■■□□ 2.66
ARF1-206ENST00000473949 RBM33Q96EV2 1170 aaKnown RBP31.66■■■□□ 2.66
ARF1-206ENST00000473949 PHF23Q9BUL5 403 aaPredicted RBP31.65■■■□□ 2.66
ARF1-206ENST00000473949 PLEKHG1Q9ULL1 1385 aa31.65■■■□□ 2.66
ARF1-206ENST00000473949 NKTRP30414 1462 aaKnown RBP31.62■■■□□ 2.65
ARF1-206ENST00000473949 NWD1Q149M9 1564 aa31.61■■■□□ 2.65
ARF1-206ENST00000473949 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.61■■■□□ 2.65
ARF1-206ENST00000473949 NUTM2DQ5VT03 806 aaPredicted RBP31.59■■■□□ 2.65
ARF1-206ENST00000473949 FAM135BQ49AJ0 1406 aa31.57■■■□□ 2.64
ARF1-206ENST00000473949 MSH6P52701 1360 aa31.56■■■□□ 2.64
ARF1-206ENST00000473949 TBX22Q9Y458 520 aa31.53■■■□□ 2.64
ARF1-206ENST00000473949 CHD2O14647 1828 aaKnown RBP31.52■■■□□ 2.64
ARF1-206ENST00000473949 ROBO1Q9Y6N7 1651 aa31.5■■■□□ 2.63
ARF1-206ENST00000473949 ADAMTS13Q76LX8 1427 aa31.46■■■□□ 2.63
ARF1-206ENST00000473949 RRBP1Q9P2E9 1410 aaKnown RBP31.46■■■□□ 2.63
ARF1-206ENST00000473949 DIP2AQ14689 1571 aa31.46■■■□□ 2.63
ARF1-206ENST00000473949 C14orf37Q86TY3 774 aa31.45■■■□□ 2.63
ARF1-206ENST00000473949 SPHKAPQ2M3C7 1700 aa31.44■■■□□ 2.62
ARF1-206ENST00000473949 SLAIN2Q9P270 581 aa31.43■■■□□ 2.62
ARF1-206ENST00000473949 ZNF326Q5BKZ1 582 aaKnown RBP31.42■■■□□ 2.62
ARF1-206ENST00000473949 PIK3R4Q99570 1358 aa31.4■■■□□ 2.62
ARF1-206ENST00000473949 TRPM2O94759 1503 aa31.39■■■□□ 2.61
ARF1-206ENST00000473949 NCOA3Q9Y6Q9 1424 aa31.38■■■□□ 2.61
ARF1-206ENST00000473949 NAIPQ13075 1403 aa31.37■■■□□ 2.61
ARF1-206ENST00000473949 AMOTL2Q9Y2J4 779 aa31.34■■■□□ 2.61
ARF1-206ENST00000473949 PHLPP1O60346 1717 aa31.32■■■□□ 2.61
ARF1-206ENST00000473949 TRIM52Q96A61 297 aa31.32■■■□□ 2.6
ARF1-206ENST00000473949 ATF3P18847 181 aa31.31■■■□□ 2.6
ARF1-206ENST00000473949 C19orf44Q9H6X5 657 aa31.31■■■□□ 2.6
ARF1-206ENST00000473949 CADPS2Q86UW7 1296 aa31.3■■■□□ 2.6
ARF1-206ENST00000473949 CLTCL1P53675 1640 aa31.3■■■□□ 2.6
ARF1-206ENST00000473949 PTPRUQ92729 1446 aa31.3■■■□□ 2.6
ARF1-206ENST00000473949 RGS17Q9UGC6 210 aaPredicted RBP31.29■■■□□ 2.6
ARF1-206ENST00000473949 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.28■■■□□ 2.6
ARF1-206ENST00000473949 SETBP1Q9Y6X0 1596 aa31.28■■■□□ 2.6
ARF1-206ENST00000473949 NRXN3Q9Y4C0 1643 aa31.27■■■□□ 2.6
ARF1-206ENST00000473949 HFM1A2PYH4 1435 aa31.24■■■□□ 2.59
ARF1-206ENST00000473949 JCADQ9P266 1359 aa31.23■■■□□ 2.59
ARF1-206ENST00000473949 KIF1BO60333 1816 aa31.23■■■□□ 2.59
ARF1-206ENST00000473949 NEXMIFQ5QGS0 1516 aa31.22■■■□□ 2.59
ARF1-206ENST00000473949 METP08581 1390 aa31.2■■■□□ 2.59
ARF1-206ENST00000473949 SLC4A1APQ9BWU0 796 aaKnown RBP31.2■■■□□ 2.59
ARF1-206ENST00000473949 XRN1Q8IZH2 1706 aaKnown RBP31.2■■■□□ 2.58
ARF1-206ENST00000473949 COL16A1Q07092 1604 aaPredicted RBP31.19■■■□□ 2.58
ARF1-206ENST00000473949 DCCP43146 1447 aa31.15■■■□□ 2.58
ARF1-206ENST00000473949 POTEAQ6S8J7 498 aa31.14■■■□□ 2.58
ARF1-206ENST00000473949 AHDC1Q5TGY3 1603 aaPredicted RBP31.13■■■□□ 2.57
ARF1-206ENST00000473949 BRINP3Q76B58 766 aa31.12■■■□□ 2.57
ARF1-206ENST00000473949 VGFO15240 615 aaPredicted RBP31.11■■■□□ 2.57
ARF1-206ENST00000473949 SPATA31A6Q5VVP1 1343 aa31.08■■■□□ 2.57
ARF1-206ENST00000473949 MEX3CQ5U5Q3 659 aaKnown RBP31.08■■■□□ 2.57
ARF1-206ENST00000473949 RPGRIP1LQ68CZ1 1315 aa31.05■■■□□ 2.56
ARF1-206ENST00000473949 FOXD1Q16676 465 aa31.05■■■□□ 2.56
ARF1-206ENST00000473949 MST1RQ04912 1400 aa31.05■■■□□ 2.56
ARF1-206ENST00000473949 ADGRL3Q9HAR2 1447 aa31.05■■■□□ 2.56
ARF1-206ENST00000473949 ASXL1Q8IXJ9 1541 aa31.04■■■□□ 2.56
ARF1-206ENST00000473949 SHPRHQ149N8 1683 aa31.02■■■□□ 2.56
ARF1-206ENST00000473949 LRP6O75581 1613 aa31.02■■■□□ 2.56
ARF1-206ENST00000473949 NALCNQ8IZF0 1738 aa31.01■■■□□ 2.55
ARF1-206ENST00000473949 PPLO60437 1756 aa30.97■■■□□ 2.55
ARF1-206ENST00000473949 NUTM2BA6NNL0 878 aaPredicted RBP30.97■■■□□ 2.55
ARF1-206ENST00000473949 NUTM2EB1AL46 878 aaPredicted RBP30.97■■■□□ 2.55
ARF1-206ENST00000473949 NUTM2AQ8IVF1 878 aaPredicted RBP30.97■■■□□ 2.55
ARF1-206ENST00000473949 SETD1AO15047 1707 aaKnown RBP30.97■■■□□ 2.55
ARF1-206ENST00000473949 PTCH1Q13635 1447 aa30.97■■■□□ 2.55
ARF1-206ENST00000473949 CCDC144AA2RUR9 1427 aa30.96■■■□□ 2.55
ARF1-206ENST00000473949 ROBO2Q9HCK4 1378 aa30.94■■■□□ 2.54
ARF1-206ENST00000473949 NHSL1Q5SYE7 1610 aa30.94■■■□□ 2.54
ARF1-206ENST00000473949 ZNF772Q68DY9 489 aaPredicted RBP30.93■■■□□ 2.54
ARF1-206ENST00000473949 DDX17Q92841 729 aaKnown RBP30.93■■■□□ 2.54
ARF1-206ENST00000473949 MPHOSPH9Q99550 1183 aa30.93■■■□□ 2.54
ARF1-206ENST00000473949 SETD5Q9C0A6 1442 aa30.92■■■□□ 2.54
ARF1-206ENST00000473949 RGL3Q3MIN7 710 aa30.92■■■□□ 2.54
ARF1-206ENST00000473949 LRRC59Q96AG4 307 aaKnown RBP30.91■■■□□ 2.54
ARF1-206ENST00000473949 C1orf167Q5SNV9 1468 aa30.89■■■□□ 2.54
ARF1-206ENST00000473949 ADGRF5Q8IZF2 1346 aa30.87■■■□□ 2.53
ARF1-206ENST00000473949 PRAG1Q86YV5 1406 aa30.85■■■□□ 2.53
ARF1-206ENST00000473949 SPATA31E1Q6ZUB1 1445 aa30.82■■■□□ 2.52
ARF1-206ENST00000473949 ANKRD30BQ9BXX2 1392 aa30.82■■■□□ 2.52
ARF1-206ENST00000473949 ORAI2Q96SN7 254 aa30.82■■■□□ 2.52
ARF1-206ENST00000473949 PNPLA6Q8IY17 1366 aa30.8■■■□□ 2.52
ARF1-206ENST00000473949 STK26Q9P289 416 aa30.8■■■□□ 2.52
ARF1-206ENST00000473949 AFF2P51816 1311 aa30.78■■■□□ 2.52
ARF1-206ENST00000473949 ACIN1Q9UKV3 1341 aaKnown RBP30.78■■■□□ 2.52
ARF1-206ENST00000473949 IFT172Q9UG01 1749 aa30.77■■■□□ 2.52
ARF1-206ENST00000473949 RXRBP28702 533 aa30.76■■■□□ 2.51
ARF1-206ENST00000473949 C8orf37Q96NL8 207 aa30.76■■■□□ 2.51
ARF1-206ENST00000473949 TMEM132EQ6IEE7 984 aa30.73■■■□□ 2.51
ARF1-206ENST00000473949 LAMC1P11047 1609 aa30.73■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms