RNA–Protein interactions for RNA: ENST00000461934.5

UBA3-205, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,224 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-205ENST00000461934 HSPA1LP34931 641 aa20.23■□□□□ 0.83
UBA3-205ENST00000461934 TMEM131LA2VDJ0 1609 aa20.22■□□□□ 0.83
UBA3-205ENST00000461934 ALKQ9UM73 1620 aa20.21■□□□□ 0.83
UBA3-205ENST00000461934 CHD2O14647 1828 aaKnown RBP20.2■□□□□ 0.82
UBA3-205ENST00000461934 SPHKAPQ2M3C7 1700 aa20.2■□□□□ 0.82
UBA3-205ENST00000461934 HDGFP51858 240 aaKnown RBP20.2■□□□□ 0.82
UBA3-205ENST00000461934 ILDR2Q71H61 639 aa20.2■□□□□ 0.82
UBA3-205ENST00000461934 PPP1R15AO75807 674 aaPredicted RBP20.19■□□□□ 0.82
UBA3-205ENST00000461934 CHGAP10645 457 aaKnown RBP20.19■□□□□ 0.82
UBA3-205ENST00000461934 MED1Q15648 1581 aaPredicted RBP20.19■□□□□ 0.82
UBA3-205ENST00000461934 SLC26A8Q96RN1 970 aa20.17■□□□□ 0.82
UBA3-205ENST00000461934 NUP155O75694 1391 aa20.15■□□□□ 0.82
UBA3-205ENST00000461934 NWD1Q149M9 1564 aa20.15■□□□□ 0.82
UBA3-205ENST00000461934 RIMS2Q9UQ26 1411 aa20.14■□□□□ 0.81
UBA3-205ENST00000461934 KCNA6P17658 529 aa20.14■□□□□ 0.81
UBA3-205ENST00000461934 KIF1BO60333 1816 aa20.13■□□□□ 0.81
UBA3-205ENST00000461934 NKTRP30414 1462 aaKnown RBP20.12■□□□□ 0.81
UBA3-205ENST00000461934 PROSER2Q86WR7 435 aaPredicted RBP20.12■□□□□ 0.81
UBA3-205ENST00000461934 SOCS7O14512 581 aa20.11■□□□□ 0.81
UBA3-205ENST00000461934 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.11■□□□□ 0.81
UBA3-205ENST00000461934 ZFYVE9O95405 1425 aa20.1■□□□□ 0.81
UBA3-205ENST00000461934 PLEKHG1Q9ULL1 1385 aa20.1■□□□□ 0.81
UBA3-205ENST00000461934 ROBO1Q9Y6N7 1651 aa20.1■□□□□ 0.81
UBA3-205ENST00000461934 TMEM94Q12767 1356 aa20.09■□□□□ 0.81
UBA3-205ENST00000461934 DIP2AQ14689 1571 aa20.08■□□□□ 0.81
UBA3-205ENST00000461934 MSH6P52701 1360 aa20.06■□□□□ 0.8
UBA3-205ENST00000461934 PHLPP1O60346 1717 aa20.05■□□□□ 0.8
UBA3-205ENST00000461934 RRBP1Q9P2E9 1410 aaKnown RBP20.04■□□□□ 0.8
UBA3-205ENST00000461934 NUTM2DQ5VT03 806 aaPredicted RBP20.04■□□□□ 0.8
UBA3-205ENST00000461934 RBM33Q96EV2 1170 aaKnown RBP20.04■□□□□ 0.8
UBA3-205ENST00000461934 TRPM2O94759 1503 aa20.03■□□□□ 0.8
UBA3-205ENST00000461934 C14orf37Q86TY3 774 aa20.01■□□□□ 0.79
UBA3-205ENST00000461934 TBX22Q9Y458 520 aa20.01■□□□□ 0.79
UBA3-205ENST00000461934 FAM135BQ49AJ0 1406 aa20.01■□□□□ 0.79
UBA3-205ENST00000461934 SIPA1L2Q9P2F8 1722 aaPredicted RBP20■□□□□ 0.79
UBA3-205ENST00000461934 ZNF326Q5BKZ1 582 aaKnown RBP20■□□□□ 0.79
UBA3-205ENST00000461934 CLTCL1P53675 1640 aa20■□□□□ 0.79
UBA3-205ENST00000461934 PIK3R4Q99570 1358 aa19.96■□□□□ 0.79
UBA3-205ENST00000461934 NAIPQ13075 1403 aa19.96■□□□□ 0.79
UBA3-205ENST00000461934 ADAMTS13Q76LX8 1427 aa19.96■□□□□ 0.79
UBA3-205ENST00000461934 TRIM52Q96A61 297 aa19.96■□□□□ 0.79
UBA3-205ENST00000461934 NRXN3Q9Y4C0 1643 aa19.95■□□□□ 0.78
UBA3-205ENST00000461934 NCOA3Q9Y6Q9 1424 aa19.94■□□□□ 0.78
UBA3-205ENST00000461934 SETBP1Q9Y6X0 1596 aa19.93■□□□□ 0.78
UBA3-205ENST00000461934 SLAIN2Q9P270 581 aa19.92■□□□□ 0.78
UBA3-205ENST00000461934 XRN1Q8IZH2 1706 aaKnown RBP19.91■□□□□ 0.78
UBA3-205ENST00000461934 ATF3P18847 181 aa19.9■□□□□ 0.78
UBA3-205ENST00000461934 HFM1A2PYH4 1435 aa19.9■□□□□ 0.78
UBA3-205ENST00000461934 NEXMIFQ5QGS0 1516 aa19.9■□□□□ 0.78
UBA3-205ENST00000461934 PPLO60437 1756 aa19.89■□□□□ 0.77
UBA3-205ENST00000461934 AMOTL2Q9Y2J4 779 aa19.89■□□□□ 0.77
UBA3-205ENST00000461934 CADPS2Q86UW7 1296 aa19.88■□□□□ 0.77
UBA3-205ENST00000461934 C19orf44Q9H6X5 657 aa19.87■□□□□ 0.77
UBA3-205ENST00000461934 SLC4A1APQ9BWU0 796 aaKnown RBP19.86■□□□□ 0.77
UBA3-205ENST00000461934 COL16A1Q07092 1604 aaPredicted RBP19.86■□□□□ 0.77
UBA3-205ENST00000461934 SETD1AO15047 1707 aaKnown RBP19.85■□□□□ 0.77
UBA3-205ENST00000461934 PTPRUQ92729 1446 aa19.85■□□□□ 0.77
UBA3-205ENST00000461934 NALCNQ8IZF0 1738 aa19.84■□□□□ 0.77
UBA3-205ENST00000461934 PIAS4Q8N2W9 510 aaPredicted RBP19.83■□□□□ 0.77
UBA3-205ENST00000461934 SHPRHQ149N8 1683 aa19.83■□□□□ 0.76
UBA3-205ENST00000461934 JCADQ9P266 1359 aa19.83■□□□□ 0.76
UBA3-205ENST00000461934 AHDC1Q5TGY3 1603 aaPredicted RBP19.82■□□□□ 0.76
UBA3-205ENST00000461934 DCCP43146 1447 aa19.8■□□□□ 0.76
UBA3-205ENST00000461934 VGFO15240 615 aaPredicted RBP19.8■□□□□ 0.76
UBA3-205ENST00000461934 METP08581 1390 aa19.79■□□□□ 0.76
UBA3-205ENST00000461934 NHSL1Q5SYE7 1610 aa19.78■□□□□ 0.76
UBA3-205ENST00000461934 IFT172Q9UG01 1749 aa19.77■□□□□ 0.76
UBA3-205ENST00000461934 RPGRIP1LQ68CZ1 1315 aa19.76■□□□□ 0.75
UBA3-205ENST00000461934 MEX3CQ5U5Q3 659 aaKnown RBP19.75■□□□□ 0.75
UBA3-205ENST00000461934 RGS17Q9UGC6 210 aaPredicted RBP19.74■□□□□ 0.75
UBA3-205ENST00000461934 ASXL1Q8IXJ9 1541 aa19.74■□□□□ 0.75
UBA3-205ENST00000461934 CCDC144AA2RUR9 1427 aa19.74■□□□□ 0.75
UBA3-205ENST00000461934 ADGRL3Q9HAR2 1447 aa19.74■□□□□ 0.75
UBA3-205ENST00000461934 SPATA31A6Q5VVP1 1343 aa19.73■□□□□ 0.75
UBA3-205ENST00000461934 BRINP3Q76B58 766 aa19.72■□□□□ 0.75
UBA3-205ENST00000461934 MST1RQ04912 1400 aa19.71■□□□□ 0.75
UBA3-205ENST00000461934 ACIN1Q9UKV3 1341 aaKnown RBP19.7■□□□□ 0.74
UBA3-205ENST00000461934 PTCH1Q13635 1447 aa19.69■□□□□ 0.74
UBA3-205ENST00000461934 MPHOSPH9Q99550 1183 aa19.68■□□□□ 0.74
UBA3-205ENST00000461934 POTEAQ6S8J7 498 aa19.67■□□□□ 0.74
UBA3-205ENST00000461934 LRP6O75581 1613 aa19.66■□□□□ 0.74
UBA3-205ENST00000461934 KNDC1Q76NI1 1749 aa19.66■□□□□ 0.74
UBA3-205ENST00000461934 RGL3Q3MIN7 710 aa19.66■□□□□ 0.74
UBA3-205ENST00000461934 NUTM2BA6NNL0 878 aaPredicted RBP19.65■□□□□ 0.74
UBA3-205ENST00000461934 NUTM2EB1AL46 878 aaPredicted RBP19.65■□□□□ 0.74
UBA3-205ENST00000461934 NUTM2AQ8IVF1 878 aaPredicted RBP19.65■□□□□ 0.74
UBA3-205ENST00000461934 SETD5Q9C0A6 1442 aa19.63■□□□□ 0.73
UBA3-205ENST00000461934 ZNF772Q68DY9 489 aaPredicted RBP19.63■□□□□ 0.73
UBA3-205ENST00000461934 LRRC59Q96AG4 307 aaKnown RBP19.63■□□□□ 0.73
UBA3-205ENST00000461934 ANKRD30BQ9BXX2 1392 aa19.62■□□□□ 0.73
UBA3-205ENST00000461934 ROBO2Q9HCK4 1378 aa19.62■□□□□ 0.73
UBA3-205ENST00000461934 LAMC1P11047 1609 aa19.62■□□□□ 0.73
UBA3-205ENST00000461934 C1orf167Q5SNV9 1468 aa19.61■□□□□ 0.73
UBA3-205ENST00000461934 PRAG1Q86YV5 1406 aa19.6■□□□□ 0.73
UBA3-205ENST00000461934 ADGRF5Q8IZF2 1346 aa19.59■□□□□ 0.73
UBA3-205ENST00000461934 CDC42BPGQ6DT37 1551 aa19.59■□□□□ 0.73
UBA3-205ENST00000461934 SPATA31E1Q6ZUB1 1445 aa19.59■□□□□ 0.73
UBA3-205ENST00000461934 RGPD8O14715 1765 aaPredicted RBP19.58■□□□□ 0.73
UBA3-205ENST00000461934 DDX17Q92841 729 aaKnown RBP19.57■□□□□ 0.72
UBA3-205ENST00000461934 STK26Q9P289 416 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms