RNA–Protein interactions for RNA: ENST00000461525.5

COL1A2-202, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL1A2, Length 776 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-202ENST00000461525 KCNA6P17658 529 aa26.91■■□□□ 1.9
COL1A2-202ENST00000461525 HDGFP51858 240 aaKnown RBP26.91■■□□□ 1.9
COL1A2-202ENST00000461525 RIMS2Q9UQ26 1411 aa26.9■■□□□ 1.9
COL1A2-202ENST00000461525 E9PCH4 1651 aa26.89■■□□□ 1.9
COL1A2-202ENST00000461525 ILDR2Q71H61 639 aa26.89■■□□□ 1.9
COL1A2-202ENST00000461525 PLEKHG1Q9ULL1 1385 aa26.88■■□□□ 1.89
COL1A2-202ENST00000461525 TMEM131LA2VDJ0 1609 aa26.87■■□□□ 1.89
COL1A2-202ENST00000461525 TMEM94Q12767 1356 aa26.86■■□□□ 1.89
COL1A2-202ENST00000461525 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.86■■□□□ 1.89
COL1A2-202ENST00000461525 SENP3Q9H4L4 574 aaPredicted RBP26.86■■□□□ 1.89
COL1A2-202ENST00000461525 PROSER2Q86WR7 435 aaPredicted RBP26.83■■□□□ 1.89
COL1A2-202ENST00000461525 NKTRP30414 1462 aaKnown RBP26.81■■□□□ 1.88
COL1A2-202ENST00000461525 NWD1Q149M9 1564 aa26.8■■□□□ 1.88
COL1A2-202ENST00000461525 NAIPQ13075 1403 aa26.79■■□□□ 1.88
COL1A2-202ENST00000461525 NUTM2DQ5VT03 806 aaPredicted RBP26.78■■□□□ 1.88
COL1A2-202ENST00000461525 MYO5BQ9ULV0 1848 aa26.77■■□□□ 1.88
COL1A2-202ENST00000461525 RBM33Q96EV2 1170 aaKnown RBP26.77■■□□□ 1.88
COL1A2-202ENST00000461525 TBX22Q9Y458 520 aa26.77■■□□□ 1.88
COL1A2-202ENST00000461525 XIRP1Q702N8 1843 aaKnown RBP26.76■■□□□ 1.87
COL1A2-202ENST00000461525 MED1Q15648 1581 aaPredicted RBP26.74■■□□□ 1.87
COL1A2-202ENST00000461525 ADAMTS13Q76LX8 1427 aa26.73■■□□□ 1.87
COL1A2-202ENST00000461525 HFM1A2PYH4 1435 aa26.72■■□□□ 1.87
COL1A2-202ENST00000461525 FAM135BQ49AJ0 1406 aa26.72■■□□□ 1.87
COL1A2-202ENST00000461525 MSH6P52701 1360 aa26.71■■□□□ 1.87
COL1A2-202ENST00000461525 SOCS7O14512 581 aa26.71■■□□□ 1.87
COL1A2-202ENST00000461525 DIP2AQ14689 1571 aa26.69■■□□□ 1.86
COL1A2-202ENST00000461525 PIK3R4Q99570 1358 aa26.68■■□□□ 1.86
COL1A2-202ENST00000461525 SPHKAPQ2M3C7 1700 aa26.68■■□□□ 1.86
COL1A2-202ENST00000461525 ZNF326Q5BKZ1 582 aaKnown RBP26.67■■□□□ 1.86
COL1A2-202ENST00000461525 TRIM52Q96A61 297 aa26.67■■□□□ 1.86
COL1A2-202ENST00000461525 TRPM2O94759 1503 aa26.64■■□□□ 1.85
COL1A2-202ENST00000461525 CHD2O14647 1828 aaKnown RBP26.63■■□□□ 1.85
COL1A2-202ENST00000461525 PHF23Q9BUL5 403 aaPredicted RBP26.63■■□□□ 1.85
COL1A2-202ENST00000461525 NCOA3Q9Y6Q9 1424 aa26.63■■□□□ 1.85
COL1A2-202ENST00000461525 C14orf37Q86TY3 774 aa26.62■■□□□ 1.85
COL1A2-202ENST00000461525 SLAIN2Q9P270 581 aa26.6■■□□□ 1.85
COL1A2-202ENST00000461525 CLTCL1P53675 1640 aa26.6■■□□□ 1.85
COL1A2-202ENST00000461525 SLC4A1APQ9BWU0 796 aaKnown RBP26.59■■□□□ 1.85
COL1A2-202ENST00000461525 AMOTL2Q9Y2J4 779 aa26.59■■□□□ 1.85
COL1A2-202ENST00000461525 ROBO1Q9Y6N7 1651 aa26.57■■□□□ 1.84
COL1A2-202ENST00000461525 SETBP1Q9Y6X0 1596 aa26.57■■□□□ 1.84
COL1A2-202ENST00000461525 PTPRUQ92729 1446 aa26.56■■□□□ 1.84
COL1A2-202ENST00000461525 C19orf44Q9H6X5 657 aa26.54■■□□□ 1.84
COL1A2-202ENST00000461525 CADPS2Q86UW7 1296 aa26.53■■□□□ 1.84
COL1A2-202ENST00000461525 NEXMIFQ5QGS0 1516 aa26.53■■□□□ 1.84
COL1A2-202ENST00000461525 NRXN3Q9Y4C0 1643 aa26.53■■□□□ 1.84
COL1A2-202ENST00000461525 ATF3P18847 181 aa26.51■■□□□ 1.83
COL1A2-202ENST00000461525 METP08581 1390 aa26.5■■□□□ 1.83
COL1A2-202ENST00000461525 VGFO15240 615 aaPredicted RBP26.46■■□□□ 1.83
COL1A2-202ENST00000461525 XRN1Q8IZH2 1706 aaKnown RBP26.45■■□□□ 1.83
COL1A2-202ENST00000461525 KIF1BO60333 1816 aa26.44■■□□□ 1.82
COL1A2-202ENST00000461525 RPGRIP1LQ68CZ1 1315 aa26.44■■□□□ 1.82
COL1A2-202ENST00000461525 FOXD1Q16676 465 aa26.44■■□□□ 1.82
COL1A2-202ENST00000461525 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.43■■□□□ 1.82
COL1A2-202ENST00000461525 DCCP43146 1447 aa26.43■■□□□ 1.82
COL1A2-202ENST00000461525 JCADQ9P266 1359 aa26.42■■□□□ 1.82
COL1A2-202ENST00000461525 CCDC144AA2RUR9 1427 aa26.39■■□□□ 1.82
COL1A2-202ENST00000461525 PHLPP1O60346 1717 aa26.39■■□□□ 1.82
COL1A2-202ENST00000461525 MPHOSPH9Q99550 1183 aa26.39■■□□□ 1.82
COL1A2-202ENST00000461525 RGS17Q9UGC6 210 aaPredicted RBP26.37■■□□□ 1.81
COL1A2-202ENST00000461525 BRINP3Q76B58 766 aa26.36■■□□□ 1.81
COL1A2-202ENST00000461525 ADGRL3Q9HAR2 1447 aa26.36■■□□□ 1.81
COL1A2-202ENST00000461525 COL16A1Q07092 1604 aaPredicted RBP26.35■■□□□ 1.81
COL1A2-202ENST00000461525 AHDC1Q5TGY3 1603 aaPredicted RBP26.34■■□□□ 1.81
COL1A2-202ENST00000461525 ACIN1Q9UKV3 1341 aaKnown RBP26.34■■□□□ 1.81
COL1A2-202ENST00000461525 MST1RQ04912 1400 aa26.33■■□□□ 1.81
COL1A2-202ENST00000461525 PTCH1Q13635 1447 aa26.33■■□□□ 1.81
COL1A2-202ENST00000461525 SETD5Q9C0A6 1442 aa26.31■■□□□ 1.8
COL1A2-202ENST00000461525 RGL3Q3MIN7 710 aa26.3■■□□□ 1.8
COL1A2-202ENST00000461525 ROBO2Q9HCK4 1378 aa26.3■■□□□ 1.8
COL1A2-202ENST00000461525 SPATA31A6Q5VVP1 1343 aa26.29■■□□□ 1.8
COL1A2-202ENST00000461525 SPATA31E1Q6ZUB1 1445 aa26.29■■□□□ 1.8
COL1A2-202ENST00000461525 ASXL1Q8IXJ9 1541 aa26.29■■□□□ 1.8
COL1A2-202ENST00000461525 PRAG1Q86YV5 1406 aa26.28■■□□□ 1.8
COL1A2-202ENST00000461525 ADGRF5Q8IZF2 1346 aa26.27■■□□□ 1.8
COL1A2-202ENST00000461525 PPLO60437 1756 aa26.27■■□□□ 1.8
COL1A2-202ENST00000461525 SETD1AO15047 1707 aaKnown RBP26.26■■□□□ 1.79
COL1A2-202ENST00000461525 ANKRD30BQ9BXX2 1392 aa26.26■■□□□ 1.79
COL1A2-202ENST00000461525 POTEAQ6S8J7 498 aa26.25■■□□□ 1.79
COL1A2-202ENST00000461525 NALCNQ8IZF0 1738 aa26.24■■□□□ 1.79
COL1A2-202ENST00000461525 RAB3GAP2Q9H2M9 1393 aa26.22■■□□□ 1.79
COL1A2-202ENST00000461525 MEX3CQ5U5Q3 659 aaKnown RBP26.22■■□□□ 1.79
COL1A2-202ENST00000461525 LRP6O75581 1613 aa26.21■■□□□ 1.79
COL1A2-202ENST00000461525 C1orf167Q5SNV9 1468 aa26.2■■□□□ 1.78
COL1A2-202ENST00000461525 SHPRHQ149N8 1683 aa26.18■■□□□ 1.78
COL1A2-202ENST00000461525 LRRC59Q96AG4 307 aaKnown RBP26.17■■□□□ 1.78
COL1A2-202ENST00000461525 DDX17Q92841 729 aaKnown RBP26.16■■□□□ 1.78
COL1A2-202ENST00000461525 PIK3C2GO75747 1445 aa26.15■■□□□ 1.78
COL1A2-202ENST00000461525 NHSL1Q5SYE7 1610 aa26.15■■□□□ 1.78
COL1A2-202ENST00000461525 NUTM2BA6NNL0 878 aaPredicted RBP26.15■■□□□ 1.78
COL1A2-202ENST00000461525 NUTM2EB1AL46 878 aaPredicted RBP26.15■■□□□ 1.78
COL1A2-202ENST00000461525 NUTM2AQ8IVF1 878 aaPredicted RBP26.15■■□□□ 1.78
COL1A2-202ENST00000461525 STK26Q9P289 416 aa26.15■■□□□ 1.78
COL1A2-202ENST00000461525 LRPPRCP42704 1394 aaKnown RBP26.15■■□□□ 1.78
COL1A2-202ENST00000461525 TECPR2O15040 1411 aa26.13■■□□□ 1.77
COL1A2-202ENST00000461525 TMEM132EQ6IEE7 984 aa26.12■■□□□ 1.77
COL1A2-202ENST00000461525 ORAI2Q96SN7 254 aa26.12■■□□□ 1.77
COL1A2-202ENST00000461525 IFT172Q9UG01 1749 aa26.11■■□□□ 1.77
COL1A2-202ENST00000461525 ABCC11Q96J66 1382 aa26.11■■□□□ 1.77
COL1A2-202ENST00000461525 ZNF772Q68DY9 489 aaPredicted RBP26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms