RNA–Protein interactions for RNA: ENST00000461217.1

COL16A1-206, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-206ENST00000461217 KCNA6P17658 529 aa23.14■■□□□ 1.29
COL16A1-206ENST00000461217 TMEM94Q12767 1356 aa23.14■■□□□ 1.29
COL16A1-206ENST00000461217 MYO5BQ9ULV0 1848 aa23.13■■□□□ 1.29
COL16A1-206ENST00000461217 CHGAP10645 457 aaKnown RBP23.13■■□□□ 1.29
COL16A1-206ENST00000461217 PHF23Q9BUL5 403 aaPredicted RBP23.13■■□□□ 1.29
COL16A1-206ENST00000461217 E9PCH4 1651 aa23.13■■□□□ 1.29
COL16A1-206ENST00000461217 IQGAP3Q86VI3 1631 aa23.12■■□□□ 1.29
COL16A1-206ENST00000461217 PROSER2Q86WR7 435 aaPredicted RBP23.12■■□□□ 1.29
COL16A1-206ENST00000461217 TMEM131LA2VDJ0 1609 aa23.11■■□□□ 1.29
COL16A1-206ENST00000461217 RIMS2Q9UQ26 1411 aa23.11■■□□□ 1.29
COL16A1-206ENST00000461217 NWD1Q149M9 1564 aa23.1■■□□□ 1.29
COL16A1-206ENST00000461217 ZFYVE9O95405 1425 aa23.1■■□□□ 1.29
COL16A1-206ENST00000461217 HDGFP51858 240 aaKnown RBP23.1■■□□□ 1.29
COL16A1-206ENST00000461217 NKTRP30414 1462 aaKnown RBP23.1■■□□□ 1.29
COL16A1-206ENST00000461217 PLEKHG1Q9ULL1 1385 aa23.09■■□□□ 1.29
COL16A1-206ENST00000461217 RBM33Q96EV2 1170 aaKnown RBP23.08■■□□□ 1.29
COL16A1-206ENST00000461217 NUP155O75694 1391 aa23.08■■□□□ 1.29
COL16A1-206ENST00000461217 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.04■■□□□ 1.28
COL16A1-206ENST00000461217 FAM135BQ49AJ0 1406 aa23.03■■□□□ 1.28
COL16A1-206ENST00000461217 MSH6P52701 1360 aa23.02■■□□□ 1.28
COL16A1-206ENST00000461217 NUTM2DQ5VT03 806 aaPredicted RBP23.02■■□□□ 1.28
COL16A1-206ENST00000461217 ROBO1Q9Y6N7 1651 aa23.02■■□□□ 1.28
COL16A1-206ENST00000461217 CHD2O14647 1828 aaKnown RBP23■■□□□ 1.27
COL16A1-206ENST00000461217 DIP2AQ14689 1571 aa22.97■■□□□ 1.27
COL16A1-206ENST00000461217 TBX22Q9Y458 520 aa22.97■■□□□ 1.27
COL16A1-206ENST00000461217 C14orf37Q86TY3 774 aa22.96■■□□□ 1.27
COL16A1-206ENST00000461217 SPHKAPQ2M3C7 1700 aa22.95■■□□□ 1.26
COL16A1-206ENST00000461217 ADAMTS13Q76LX8 1427 aa22.94■■□□□ 1.26
COL16A1-206ENST00000461217 TRPM2O94759 1503 aa22.92■■□□□ 1.26
COL16A1-206ENST00000461217 RRBP1Q9P2E9 1410 aaKnown RBP22.91■■□□□ 1.26
COL16A1-206ENST00000461217 SLAIN2Q9P270 581 aa22.91■■□□□ 1.26
COL16A1-206ENST00000461217 PIK3R4Q99570 1358 aa22.9■■□□□ 1.26
COL16A1-206ENST00000461217 ZNF326Q5BKZ1 582 aaKnown RBP22.9■■□□□ 1.26
COL16A1-206ENST00000461217 PHLPP1O60346 1717 aa22.89■■□□□ 1.26
COL16A1-206ENST00000461217 NCOA3Q9Y6Q9 1424 aa22.89■■□□□ 1.25
COL16A1-206ENST00000461217 NAIPQ13075 1403 aa22.85■■□□□ 1.25
COL16A1-206ENST00000461217 CLTCL1P53675 1640 aa22.84■■□□□ 1.25
COL16A1-206ENST00000461217 ATF3P18847 181 aa22.84■■□□□ 1.25
COL16A1-206ENST00000461217 AMOTL2Q9Y2J4 779 aa22.84■■□□□ 1.25
COL16A1-206ENST00000461217 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.84■■□□□ 1.25
COL16A1-206ENST00000461217 SETBP1Q9Y6X0 1596 aa22.83■■□□□ 1.25
COL16A1-206ENST00000461217 PTPRUQ92729 1446 aa22.82■■□□□ 1.24
COL16A1-206ENST00000461217 NRXN3Q9Y4C0 1643 aa22.82■■□□□ 1.24
COL16A1-206ENST00000461217 CADPS2Q86UW7 1296 aa22.82■■□□□ 1.24
COL16A1-206ENST00000461217 C19orf44Q9H6X5 657 aa22.82■■□□□ 1.24
COL16A1-206ENST00000461217 RGS17Q9UGC6 210 aaPredicted RBP22.82■■□□□ 1.24
COL16A1-206ENST00000461217 JCADQ9P266 1359 aa22.8■■□□□ 1.24
COL16A1-206ENST00000461217 TRIM52Q96A61 297 aa22.8■■□□□ 1.24
COL16A1-206ENST00000461217 XRN1Q8IZH2 1706 aaKnown RBP22.79■■□□□ 1.24
COL16A1-206ENST00000461217 COL16A1Q07092 1604 aaPredicted RBP22.79■■□□□ 1.24
COL16A1-206ENST00000461217 KIF1BO60333 1816 aa22.78■■□□□ 1.24
COL16A1-206ENST00000461217 NEXMIFQ5QGS0 1516 aa22.77■■□□□ 1.24
COL16A1-206ENST00000461217 HFM1A2PYH4 1435 aa22.76■■□□□ 1.23
COL16A1-206ENST00000461217 METP08581 1390 aa22.75■■□□□ 1.23
COL16A1-206ENST00000461217 AHDC1Q5TGY3 1603 aaPredicted RBP22.74■■□□□ 1.23
COL16A1-206ENST00000461217 DCCP43146 1447 aa22.74■■□□□ 1.23
COL16A1-206ENST00000461217 POTEAQ6S8J7 498 aa22.72■■□□□ 1.23
COL16A1-206ENST00000461217 SLC4A1APQ9BWU0 796 aaKnown RBP22.72■■□□□ 1.23
COL16A1-206ENST00000461217 SPATA31A6Q5VVP1 1343 aa22.69■■□□□ 1.22
COL16A1-206ENST00000461217 MEX3CQ5U5Q3 659 aaKnown RBP22.69■■□□□ 1.22
COL16A1-206ENST00000461217 BRINP3Q76B58 766 aa22.69■■□□□ 1.22
COL16A1-206ENST00000461217 ASXL1Q8IXJ9 1541 aa22.67■■□□□ 1.22
COL16A1-206ENST00000461217 VGFO15240 615 aaPredicted RBP22.67■■□□□ 1.22
COL16A1-206ENST00000461217 SHPRHQ149N8 1683 aa22.67■■□□□ 1.22
COL16A1-206ENST00000461217 MST1RQ04912 1400 aa22.66■■□□□ 1.22
COL16A1-206ENST00000461217 ADGRL3Q9HAR2 1447 aa22.66■■□□□ 1.22
COL16A1-206ENST00000461217 LRP6O75581 1613 aa22.66■■□□□ 1.22
COL16A1-206ENST00000461217 NALCNQ8IZF0 1738 aa22.65■■□□□ 1.22
COL16A1-206ENST00000461217 RPGRIP1LQ68CZ1 1315 aa22.62■■□□□ 1.21
COL16A1-206ENST00000461217 NHSL1Q5SYE7 1610 aa22.61■■□□□ 1.21
COL16A1-206ENST00000461217 SETD1AO15047 1707 aaKnown RBP22.61■■□□□ 1.21
COL16A1-206ENST00000461217 PPLO60437 1756 aa22.61■■□□□ 1.21
COL16A1-206ENST00000461217 NUTM2BA6NNL0 878 aaPredicted RBP22.6■■□□□ 1.21
COL16A1-206ENST00000461217 NUTM2EB1AL46 878 aaPredicted RBP22.6■■□□□ 1.21
COL16A1-206ENST00000461217 FOXD1Q16676 465 aa22.6■■□□□ 1.21
COL16A1-206ENST00000461217 NUTM2AQ8IVF1 878 aaPredicted RBP22.6■■□□□ 1.21
COL16A1-206ENST00000461217 PTCH1Q13635 1447 aa22.59■■□□□ 1.21
COL16A1-206ENST00000461217 CCDC144AA2RUR9 1427 aa22.57■■□□□ 1.2
COL16A1-206ENST00000461217 ZNF772Q68DY9 489 aaPredicted RBP22.57■■□□□ 1.2
COL16A1-206ENST00000461217 SETD5Q9C0A6 1442 aa22.57■■□□□ 1.2
COL16A1-206ENST00000461217 ROBO2Q9HCK4 1378 aa22.56■■□□□ 1.2
COL16A1-206ENST00000461217 LRRC59Q96AG4 307 aaKnown RBP22.55■■□□□ 1.2
COL16A1-206ENST00000461217 DDX17Q92841 729 aaKnown RBP22.54■■□□□ 1.2
COL16A1-206ENST00000461217 C1orf167Q5SNV9 1468 aa22.54■■□□□ 1.2
COL16A1-206ENST00000461217 RGL3Q3MIN7 710 aa22.52■■□□□ 1.2
COL16A1-206ENST00000461217 PRAG1Q86YV5 1406 aa22.51■■□□□ 1.19
COL16A1-206ENST00000461217 MPHOSPH9Q99550 1183 aa22.51■■□□□ 1.19
COL16A1-206ENST00000461217 PNPLA6Q8IY17 1366 aa22.49■■□□□ 1.19
COL16A1-206ENST00000461217 ADGRF5Q8IZF2 1346 aa22.48■■□□□ 1.19
COL16A1-206ENST00000461217 AFF2P51816 1311 aa22.47■■□□□ 1.19
COL16A1-206ENST00000461217 SPATA31E1Q6ZUB1 1445 aa22.47■■□□□ 1.19
COL16A1-206ENST00000461217 IFT172Q9UG01 1749 aa22.46■■□□□ 1.19
COL16A1-206ENST00000461217 ORAI2Q96SN7 254 aa22.46■■□□□ 1.19
COL16A1-206ENST00000461217 ANKRD30BQ9BXX2 1392 aa22.46■■□□□ 1.19
COL16A1-206ENST00000461217 C8orf37Q96NL8 207 aa22.45■■□□□ 1.18
COL16A1-206ENST00000461217 LAMC1P11047 1609 aa22.44■■□□□ 1.18
COL16A1-206ENST00000461217 RXRBP28702 533 aa22.44■■□□□ 1.18
COL16A1-206ENST00000461217 CDC42BPGQ6DT37 1551 aa22.44■■□□□ 1.18
COL16A1-206ENST00000461217 STK26Q9P289 416 aa22.44■■□□□ 1.18
COL16A1-206ENST00000461217 ACIN1Q9UKV3 1341 aaKnown RBP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms