RNA–Protein interactions for RNA: ENST00000455999.5

UBE2F-219, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-219ENST00000455999 PHLPP1O60346 1717 aa23.2■■□□□ 1.3
UBE2F-219ENST00000455999 ADGRL2O95490 1459 aa23.2■■□□□ 1.3
UBE2F-219ENST00000455999 NKTRP30414 1462 aaKnown RBP23.17■■□□□ 1.3
UBE2F-219ENST00000455999 TMEM131LA2VDJ0 1609 aa23.17■■□□□ 1.3
UBE2F-219ENST00000455999 POTEAQ6S8J7 498 aa23.15■■□□□ 1.3
UBE2F-219ENST00000455999 BCANQ96GW7 911 aa23.15■■□□□ 1.3
UBE2F-219ENST00000455999 SETD1AO15047 1707 aaKnown RBP23.14■■□□□ 1.3
UBE2F-219ENST00000455999 ZFYVE9O95405 1425 aa23.14■■□□□ 1.29
UBE2F-219ENST00000455999 RPRD2Q5VT52 1461 aaKnown RBP23.13■■□□□ 1.29
UBE2F-219ENST00000455999 SLC52A1Q9NWF4 448 aa23.13■■□□□ 1.29
UBE2F-219ENST00000455999 E9PCH4 1651 aa23.13■■□□□ 1.29
UBE2F-219ENST00000455999 FAM50AQ14320 339 aaKnown RBP23.12■■□□□ 1.29
UBE2F-219ENST00000455999 ANKRD50Q9ULJ7 1429 aa23.12■■□□□ 1.29
UBE2F-219ENST00000455999 MSH6P52701 1360 aa23.11■■□□□ 1.29
UBE2F-219ENST00000455999 UNC13BO14795 1591 aa23.1■■□□□ 1.29
UBE2F-219ENST00000455999 RIMS2Q9UQ26 1411 aa23.09■■□□□ 1.29
UBE2F-219ENST00000455999 PLEKHG1Q9ULL1 1385 aa23.09■■□□□ 1.29
UBE2F-219ENST00000455999 COL16A1Q07092 1604 aaPredicted RBP23.08■■□□□ 1.28
UBE2F-219ENST00000455999 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.07■■□□□ 1.28
UBE2F-219ENST00000455999 SLAIN2Q9P270 581 aa23.06■■□□□ 1.28
UBE2F-219ENST00000455999 PPP1R15AO75807 674 aaPredicted RBP23.04■■□□□ 1.28
UBE2F-219ENST00000455999 NUTM2DQ5VT03 806 aaPredicted RBP23.03■■□□□ 1.28
UBE2F-219ENST00000455999 IQGAP3Q86VI3 1631 aa23.02■■□□□ 1.28
UBE2F-219ENST00000455999 CHGAP10645 457 aaKnown RBP23.02■■□□□ 1.28
UBE2F-219ENST00000455999 ADAMTS13Q76LX8 1427 aa23■■□□□ 1.27
UBE2F-219ENST00000455999 JCADQ9P266 1359 aa23■■□□□ 1.27
UBE2F-219ENST00000455999 TBX22Q9Y458 520 aa22.99■■□□□ 1.27
UBE2F-219ENST00000455999 DIP2AQ14689 1571 aa22.98■■□□□ 1.27
UBE2F-219ENST00000455999 HDGFP51858 240 aaKnown RBP22.98■■□□□ 1.27
UBE2F-219ENST00000455999 LRP6O75581 1613 aa22.97■■□□□ 1.27
UBE2F-219ENST00000455999 SHPRHQ149N8 1683 aa22.97■■□□□ 1.27
UBE2F-219ENST00000455999 C14orf37Q86TY3 774 aa22.95■■□□□ 1.26
UBE2F-219ENST00000455999 AHDC1Q5TGY3 1603 aaPredicted RBP22.94■■□□□ 1.26
UBE2F-219ENST00000455999 NCOA3Q9Y6Q9 1424 aa22.94■■□□□ 1.26
UBE2F-219ENST00000455999 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.94■■□□□ 1.26
UBE2F-219ENST00000455999 NRXN3Q9Y4C0 1643 aa22.93■■□□□ 1.26
UBE2F-219ENST00000455999 SPHKAPQ2M3C7 1700 aa22.93■■□□□ 1.26
UBE2F-219ENST00000455999 TRPM2O94759 1503 aa22.92■■□□□ 1.26
UBE2F-219ENST00000455999 PTPRUQ92729 1446 aa22.91■■□□□ 1.26
UBE2F-219ENST00000455999 PIK3R4Q99570 1358 aa22.89■■□□□ 1.26
UBE2F-219ENST00000455999 XRN1Q8IZH2 1706 aaKnown RBP22.89■■□□□ 1.26
UBE2F-219ENST00000455999 ROCK1Q13464 1354 aa22.89■■□□□ 1.25
UBE2F-219ENST00000455999 C19orf44Q9H6X5 657 aa22.88■■□□□ 1.25
UBE2F-219ENST00000455999 CADPS2Q86UW7 1296 aa22.87■■□□□ 1.25
UBE2F-219ENST00000455999 AMOTL2Q9Y2J4 779 aa22.87■■□□□ 1.25
UBE2F-219ENST00000455999 NUP155O75694 1391 aa22.87■■□□□ 1.25
UBE2F-219ENST00000455999 ATF3P18847 181 aa22.86■■□□□ 1.25
UBE2F-219ENST00000455999 SPATA31A6Q5VVP1 1343 aa22.85■■□□□ 1.25
UBE2F-219ENST00000455999 MEX3CQ5U5Q3 659 aaKnown RBP22.85■■□□□ 1.25
UBE2F-219ENST00000455999 NHSL1Q5SYE7 1610 aa22.84■■□□□ 1.25
UBE2F-219ENST00000455999 ITGAEP38570 1179 aa22.84■■□□□ 1.25
UBE2F-219ENST00000455999 SETBP1Q9Y6X0 1596 aa22.82■■□□□ 1.24
UBE2F-219ENST00000455999 BRINP3Q76B58 766 aa22.82■■□□□ 1.24
UBE2F-219ENST00000455999 TRIM52Q96A61 297 aa22.81■■□□□ 1.24
UBE2F-219ENST00000455999 NALCNQ8IZF0 1738 aa22.81■■□□□ 1.24
UBE2F-219ENST00000455999 KIF1BO60333 1816 aa22.8■■□□□ 1.24
UBE2F-219ENST00000455999 ASXL1Q8IXJ9 1541 aa22.8■■□□□ 1.24
UBE2F-219ENST00000455999 ZNF772Q68DY9 489 aaPredicted RBP22.79■■□□□ 1.24
UBE2F-219ENST00000455999 CLTCL1P53675 1640 aa22.79■■□□□ 1.24
UBE2F-219ENST00000455999 NUTM2BA6NNL0 878 aaPredicted RBP22.78■■□□□ 1.24
UBE2F-219ENST00000455999 NUTM2EB1AL46 878 aaPredicted RBP22.78■■□□□ 1.24
UBE2F-219ENST00000455999 NUTM2AQ8IVF1 878 aaPredicted RBP22.78■■□□□ 1.24
UBE2F-219ENST00000455999 MST1RQ04912 1400 aa22.77■■□□□ 1.24
UBE2F-219ENST00000455999 DCCP43146 1447 aa22.76■■□□□ 1.23
UBE2F-219ENST00000455999 PPARGC1BQ86YN6 1023 aaKnown RBP22.76■■□□□ 1.23
UBE2F-219ENST00000455999 METP08581 1390 aa22.76■■□□□ 1.23
UBE2F-219ENST00000455999 UPF1Q92900 1129 aaKnown RBP eCLIP22.75■■□□□ 1.23
UBE2F-219ENST00000455999 NEXMIFQ5QGS0 1516 aa22.75■■□□□ 1.23
UBE2F-219ENST00000455999 ZNF326Q5BKZ1 582 aaKnown RBP22.74■■□□□ 1.23
UBE2F-219ENST00000455999 SETD5Q9C0A6 1442 aa22.72■■□□□ 1.23
UBE2F-219ENST00000455999 DDX17Q92841 729 aaKnown RBP22.71■■□□□ 1.23
UBE2F-219ENST00000455999 RXRBP28702 533 aa22.7■■□□□ 1.22
UBE2F-219ENST00000455999 AFF2P51816 1311 aa22.7■■□□□ 1.22
UBE2F-219ENST00000455999 ADGRL3Q9HAR2 1447 aa22.69■■□□□ 1.22
UBE2F-219ENST00000455999 CDK12Q9NYV4 1490 aaPredicted RBP22.66■■□□□ 1.22
UBE2F-219ENST00000455999 PNPLA6Q8IY17 1366 aa22.64■■□□□ 1.22
UBE2F-219ENST00000455999 LRRC59Q96AG4 307 aaKnown RBP22.64■■□□□ 1.21
UBE2F-219ENST00000455999 LAMC1P11047 1609 aa22.64■■□□□ 1.21
UBE2F-219ENST00000455999 PPLO60437 1756 aa22.63■■□□□ 1.21
UBE2F-219ENST00000455999 C8orf37Q96NL8 207 aa22.62■■□□□ 1.21
UBE2F-219ENST00000455999 RGS12O14924 1447 aa22.6■■□□□ 1.21
UBE2F-219ENST00000455999 C1orf167Q5SNV9 1468 aa22.6■■□□□ 1.21
UBE2F-219ENST00000455999 QTRT2Q9H974 415 aaKnown RBP22.57■■□□□ 1.2
UBE2F-219ENST00000455999 ROBO2Q9HCK4 1378 aa22.57■■□□□ 1.2
UBE2F-219ENST00000455999 NAIPQ13075 1403 aa22.57■■□□□ 1.2
UBE2F-219ENST00000455999 PTCH1Q13635 1447 aa22.56■■□□□ 1.2
UBE2F-219ENST00000455999 MARF1Q9Y4F3 1742 aaKnown RBP22.55■■□□□ 1.2
UBE2F-219ENST00000455999 ADAMTS2O95450 1211 aa22.55■■□□□ 1.2
UBE2F-219ENST00000455999 ORAI2Q96SN7 254 aa22.55■■□□□ 1.2
UBE2F-219ENST00000455999 RBM6P78332 1123 aaKnown RBP22.54■■□□□ 1.2
UBE2F-219ENST00000455999 RRBP1Q9P2E9 1410 aaKnown RBP22.52■■□□□ 1.2
UBE2F-219ENST00000455999 NGLY1Q96IV0 654 aa22.52■■□□□ 1.2
UBE2F-219ENST00000455999 COL22A1Q8NFW1 1626 aaPredicted RBP22.52■■□□□ 1.2
UBE2F-219ENST00000455999 SOS2Q07890 1332 aaPredicted RBP22.51■■□□□ 1.19
UBE2F-219ENST00000455999 VGFO15240 615 aaPredicted RBP22.49■■□□□ 1.19
UBE2F-219ENST00000455999 PRAG1Q86YV5 1406 aa22.48■■□□□ 1.19
UBE2F-219ENST00000455999 IFT172Q9UG01 1749 aa22.46■■□□□ 1.19
UBE2F-219ENST00000455999 USP21Q9UK80 565 aa22.45■■□□□ 1.18
UBE2F-219ENST00000455999 CDC42BPGQ6DT37 1551 aa22.45■■□□□ 1.18
UBE2F-219ENST00000455999 HFM1A2PYH4 1435 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms