RNA–Protein interactions for RNA: ENST00000455904.5

HDAC11-215, Transcript of histone deacetylase 11, humanhuman

TSL 2

Gene HDAC11, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-215ENST00000455904 SLC26A8Q96RN1 970 aa27.88■■■□□ 2.05
HDAC11-215ENST00000455904 PHLPP1O60346 1717 aa27.86■■■□□ 2.05
HDAC11-215ENST00000455904 TMEM131LA2VDJ0 1609 aa27.85■■■□□ 2.05
HDAC11-215ENST00000455904 ZFYVE9O95405 1425 aa27.84■■■□□ 2.05
HDAC11-215ENST00000455904 PROSER2Q86WR7 435 aaPredicted RBP27.84■■■□□ 2.05
HDAC11-215ENST00000455904 UNC13BO14795 1591 aa27.84■■■□□ 2.05
HDAC11-215ENST00000455904 SLC52A1Q9NWF4 448 aa27.83■■■□□ 2.05
HDAC11-215ENST00000455904 ANKRD50Q9ULJ7 1429 aa27.82■■■□□ 2.04
HDAC11-215ENST00000455904 RBM33Q96EV2 1170 aaKnown RBP27.8■■■□□ 2.04
HDAC11-215ENST00000455904 MSH6P52701 1360 aa27.79■■■□□ 2.04
HDAC11-215ENST00000455904 PLEKHG1Q9ULL1 1385 aa27.79■■■□□ 2.04
HDAC11-215ENST00000455904 E9PCH4 1651 aa27.78■■■□□ 2.04
HDAC11-215ENST00000455904 RIMS2Q9UQ26 1411 aa27.76■■■□□ 2.04
HDAC11-215ENST00000455904 COL16A1Q07092 1604 aaPredicted RBP27.75■■■□□ 2.03
HDAC11-215ENST00000455904 SETD1AO15047 1707 aaKnown RBP27.74■■■□□ 2.03
HDAC11-215ENST00000455904 BCANQ96GW7 911 aa27.73■■■□□ 2.03
HDAC11-215ENST00000455904 DIP2AQ14689 1571 aa27.73■■■□□ 2.03
HDAC11-215ENST00000455904 IQGAP3Q86VI3 1631 aa27.72■■■□□ 2.03
HDAC11-215ENST00000455904 FAM50AQ14320 339 aaKnown RBP27.72■■■□□ 2.03
HDAC11-215ENST00000455904 POTEAQ6S8J7 498 aa27.71■■■□□ 2.03
HDAC11-215ENST00000455904 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.69■■■□□ 2.02
HDAC11-215ENST00000455904 PPP1R15AO75807 674 aaPredicted RBP27.68■■■□□ 2.02
HDAC11-215ENST00000455904 SLAIN2Q9P270 581 aa27.68■■■□□ 2.02
HDAC11-215ENST00000455904 JCADQ9P266 1359 aa27.66■■■□□ 2.02
HDAC11-215ENST00000455904 ADAMTS13Q76LX8 1427 aa27.66■■■□□ 2.02
HDAC11-215ENST00000455904 NCOA3Q9Y6Q9 1424 aa27.66■■■□□ 2.02
HDAC11-215ENST00000455904 HDGFP51858 240 aaKnown RBP27.64■■■□□ 2.02
HDAC11-215ENST00000455904 SHPRHQ149N8 1683 aa27.64■■■□□ 2.02
HDAC11-215ENST00000455904 AHDC1Q5TGY3 1603 aaPredicted RBP27.63■■■□□ 2.01
HDAC11-215ENST00000455904 TBX22Q9Y458 520 aa27.62■■■□□ 2.01
HDAC11-215ENST00000455904 TRPM2O94759 1503 aa27.61■■■□□ 2.01
HDAC11-215ENST00000455904 ROCK1Q13464 1354 aa27.6■■■□□ 2.01
HDAC11-215ENST00000455904 PIK3R4Q99570 1358 aa27.6■■■□□ 2.01
HDAC11-215ENST00000455904 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.59■■■□□ 2.01
HDAC11-215ENST00000455904 LRP6O75581 1613 aa27.59■■■□□ 2.01
HDAC11-215ENST00000455904 SPHKAPQ2M3C7 1700 aa27.58■■■□□ 2.01
HDAC11-215ENST00000455904 NRXN3Q9Y4C0 1643 aa27.56■■■□□ 2
HDAC11-215ENST00000455904 XRN1Q8IZH2 1706 aaKnown RBP27.56■■■□□ 2
HDAC11-215ENST00000455904 CHGAP10645 457 aaKnown RBP27.56■■■□□ 2
HDAC11-215ENST00000455904 NUTM2DQ5VT03 806 aaPredicted RBP27.53■■■□□ 2
HDAC11-215ENST00000455904 C14orf37Q86TY3 774 aa27.53■■■□□ 2
HDAC11-215ENST00000455904 SPATA31A6Q5VVP1 1343 aa27.51■■□□□ 1.99
HDAC11-215ENST00000455904 CADPS2Q86UW7 1296 aa27.51■■□□□ 1.99
HDAC11-215ENST00000455904 SETBP1Q9Y6X0 1596 aa27.51■■□□□ 1.99
HDAC11-215ENST00000455904 PTPRUQ92729 1446 aa27.5■■□□□ 1.99
HDAC11-215ENST00000455904 C19orf44Q9H6X5 657 aa27.49■■□□□ 1.99
HDAC11-215ENST00000455904 DCCP43146 1447 aa27.48■■□□□ 1.99
HDAC11-215ENST00000455904 NHSL1Q5SYE7 1610 aa27.48■■□□□ 1.99
HDAC11-215ENST00000455904 ATF3P18847 181 aa27.47■■□□□ 1.99
HDAC11-215ENST00000455904 NUP155O75694 1391 aa27.47■■□□□ 1.99
HDAC11-215ENST00000455904 ASXL1Q8IXJ9 1541 aa27.45■■□□□ 1.98
HDAC11-215ENST00000455904 AMOTL2Q9Y2J4 779 aa27.42■■□□□ 1.98
HDAC11-215ENST00000455904 NALCNQ8IZF0 1738 aa27.41■■□□□ 1.98
HDAC11-215ENST00000455904 MEX3CQ5U5Q3 659 aaKnown RBP27.41■■□□□ 1.98
HDAC11-215ENST00000455904 BRINP3Q76B58 766 aa27.4■■□□□ 1.98
HDAC11-215ENST00000455904 ZNF772Q68DY9 489 aaPredicted RBP27.39■■□□□ 1.98
HDAC11-215ENST00000455904 KIF1BO60333 1816 aa27.39■■□□□ 1.97
HDAC11-215ENST00000455904 CLTCL1P53675 1640 aa27.38■■□□□ 1.97
HDAC11-215ENST00000455904 MST1RQ04912 1400 aa27.38■■□□□ 1.97
HDAC11-215ENST00000455904 NEXMIFQ5QGS0 1516 aa27.36■■□□□ 1.97
HDAC11-215ENST00000455904 SETD5Q9C0A6 1442 aa27.34■■□□□ 1.97
HDAC11-215ENST00000455904 METP08581 1390 aa27.33■■□□□ 1.97
HDAC11-215ENST00000455904 ADGRL3Q9HAR2 1447 aa27.32■■□□□ 1.96
HDAC11-215ENST00000455904 CDK12Q9NYV4 1490 aaPredicted RBP27.32■■□□□ 1.96
HDAC11-215ENST00000455904 ITGAEP38570 1179 aa27.31■■□□□ 1.96
HDAC11-215ENST00000455904 TRIM52Q96A61 297 aa27.3■■□□□ 1.96
HDAC11-215ENST00000455904 LAMC1P11047 1609 aa27.28■■□□□ 1.96
HDAC11-215ENST00000455904 NUTM2BA6NNL0 878 aaPredicted RBP27.27■■□□□ 1.96
HDAC11-215ENST00000455904 NUTM2EB1AL46 878 aaPredicted RBP27.27■■□□□ 1.96
HDAC11-215ENST00000455904 ZNF326Q5BKZ1 582 aaKnown RBP27.27■■□□□ 1.96
HDAC11-215ENST00000455904 NUTM2AQ8IVF1 878 aaPredicted RBP27.27■■□□□ 1.96
HDAC11-215ENST00000455904 UPF1Q92900 1129 aaKnown RBP eCLIP27.27■■□□□ 1.96
HDAC11-215ENST00000455904 RXRBP28702 533 aa27.24■■□□□ 1.95
HDAC11-215ENST00000455904 AFF2P51816 1311 aa27.23■■□□□ 1.95
HDAC11-215ENST00000455904 PNPLA6Q8IY17 1366 aa27.22■■□□□ 1.95
HDAC11-215ENST00000455904 PTCH1Q13635 1447 aa27.21■■□□□ 1.95
HDAC11-215ENST00000455904 PPLO60437 1756 aa27.2■■□□□ 1.94
HDAC11-215ENST00000455904 LRRC59Q96AG4 307 aaKnown RBP27.19■■□□□ 1.94
HDAC11-215ENST00000455904 C1orf167Q5SNV9 1468 aa27.17■■□□□ 1.94
HDAC11-215ENST00000455904 RGS12O14924 1447 aa27.16■■□□□ 1.94
HDAC11-215ENST00000455904 PRAG1Q86YV5 1406 aa27.16■■□□□ 1.94
HDAC11-215ENST00000455904 DDX17Q92841 729 aaKnown RBP27.16■■□□□ 1.94
HDAC11-215ENST00000455904 NAIPQ13075 1403 aa27.15■■□□□ 1.94
HDAC11-215ENST00000455904 PPARGC1BQ86YN6 1023 aaKnown RBP27.13■■□□□ 1.93
HDAC11-215ENST00000455904 RRBP1Q9P2E9 1410 aaKnown RBP27.13■■□□□ 1.93
HDAC11-215ENST00000455904 C8orf37Q96NL8 207 aa27.12■■□□□ 1.93
HDAC11-215ENST00000455904 COL22A1Q8NFW1 1626 aaPredicted RBP27.12■■□□□ 1.93
HDAC11-215ENST00000455904 ROBO2Q9HCK4 1378 aa27.11■■□□□ 1.93
HDAC11-215ENST00000455904 MARF1Q9Y4F3 1742 aaKnown RBP27.08■■□□□ 1.93
HDAC11-215ENST00000455904 RBM6P78332 1123 aaKnown RBP27.07■■□□□ 1.92
HDAC11-215ENST00000455904 CDC42BPGQ6DT37 1551 aa27.06■■□□□ 1.92
HDAC11-215ENST00000455904 QTRT2Q9H974 415 aaKnown RBP27.05■■□□□ 1.92
HDAC11-215ENST00000455904 SOS2Q07890 1332 aaPredicted RBP27.05■■□□□ 1.92
HDAC11-215ENST00000455904 VGFO15240 615 aaPredicted RBP27.04■■□□□ 1.92
HDAC11-215ENST00000455904 HFM1A2PYH4 1435 aa27.04■■□□□ 1.92
HDAC11-215ENST00000455904 ADAMTS2O95450 1211 aa27.02■■□□□ 1.92
HDAC11-215ENST00000455904 IFT172Q9UG01 1749 aa27.02■■□□□ 1.92
HDAC11-215ENST00000455904 ORAI2Q96SN7 254 aa27.01■■□□□ 1.91
HDAC11-215ENST00000455904 RPGRIP1LQ68CZ1 1315 aa27■■□□□ 1.91
HDAC11-215ENST00000455904 NGLY1Q96IV0 654 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms