RNA–Protein interactions for RNA: ENST00000454299.2

RAB28P2-201, Transcript of RAB28, member RAS oncogene family pseudogene 2, humanhuman

BASIC

Gene RAB28P2, Length 641 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P2-201ENST00000454299 A0A0G2JS52 829 aa12.87□□□□□ -0.35
RAB28P2-201ENST00000454299 NECTIN2Q92692 538 aa12.86□□□□□ -0.35
RAB28P2-201ENST00000454299 MTRQ99707 1265 aa12.86□□□□□ -0.35
RAB28P2-201ENST00000454299 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.85□□□□□ -0.35
RAB28P2-201ENST00000454299 METTL3Q86U44 580 aaKnown RBP12.85□□□□□ -0.35
RAB28P2-201ENST00000454299 TJAP1Q5JTD0 557 aa12.84□□□□□ -0.35
RAB28P2-201ENST00000454299 NLRP7Q8WX94 980 aa12.84□□□□□ -0.35
RAB28P2-201ENST00000454299 COPS2P61201 443 aa12.82□□□□□ -0.36
RAB28P2-201ENST00000454299 ZNF516Q92618 1163 aa12.81□□□□□ -0.36
RAB28P2-201ENST00000454299 IL21Q9HBE4 155 aa12.81□□□□□ -0.36
RAB28P2-201ENST00000454299 CFHP08603 1231 aa12.78□□□□□ -0.36
RAB28P2-201ENST00000454299 SLC10A3P09131 477 aa12.77□□□□□ -0.37
RAB28P2-201ENST00000454299 PRR14Q9BWN1 585 aa12.77□□□□□ -0.37
RAB28P2-201ENST00000454299 PCDHB3Q9Y5E6 796 aa12.77□□□□□ -0.37
RAB28P2-201ENST00000454299 PHOX2BQ99453 314 aa12.76□□□□□ -0.37
RAB28P2-201ENST00000454299 KMT5BQ4FZB7 885 aa12.75□□□□□ -0.37
RAB28P2-201ENST00000454299 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.75□□□□□ -0.37
RAB28P2-201ENST00000454299 LMOD2Q6P5Q4 547 aa12.73□□□□□ -0.37
RAB28P2-201ENST00000454299 BLOC1S3Q6QNY0 202 aa12.73□□□□□ -0.37
RAB28P2-201ENST00000454299 RDH13Q8NBN7 331 aa12.73□□□□□ -0.37
RAB28P2-201ENST00000454299 NKX2-3Q8TAU0 364 aa12.73□□□□□ -0.37
RAB28P2-201ENST00000454299 DDX11L8A8MPP1 907 aa12.72□□□□□ -0.37
RAB28P2-201ENST00000454299 MAP2K5Q13163 448 aa12.72□□□□□ -0.37
RAB28P2-201ENST00000454299 DAXXQ9UER7 740 aaPredicted RBP12.72□□□□□ -0.37
RAB28P2-201ENST00000454299 ACTN4O43707 911 aaKnown RBP12.7□□□□□ -0.38
RAB28P2-201ENST00000454299 RSPH4AQ5TD94 716 aa12.7□□□□□ -0.38
RAB28P2-201ENST00000454299 RGS20O76081 388 aa12.69□□□□□ -0.38
RAB28P2-201ENST00000454299 IRF6O14896 467 aa12.68□□□□□ -0.38
RAB28P2-201ENST00000454299 ZPR1O75312 459 aa12.68□□□□□ -0.38
RAB28P2-201ENST00000454299 PPP1R18Q6NYC8 613 aa12.67□□□□□ -0.38
RAB28P2-201ENST00000454299 TLL1O43897 1013 aa12.66□□□□□ -0.38
RAB28P2-201ENST00000454299 CCDC102AQ96A19 550 aa12.66□□□□□ -0.38
RAB28P2-201ENST00000454299 PUS10Q3MIT2 529 aaKnown RBP12.65□□□□□ -0.38
RAB28P2-201ENST00000454299 MINK1Q8N4C8 1332 aaPredicted RBP12.64□□□□□ -0.39
RAB28P2-201ENST00000454299 MDM2Q00987 491 aaPredicted RBP12.63□□□□□ -0.39
RAB28P2-201ENST00000454299 SULF1Q8IWU6 871 aa12.62□□□□□ -0.39
RAB28P2-201ENST00000454299 KRI1Q8N9T8 703 aaKnown RBP12.62□□□□□ -0.39
RAB28P2-201ENST00000454299 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.62□□□□□ -0.39
RAB28P2-201ENST00000454299 NR1I2O75469 434 aa12.6□□□□□ -0.39
RAB28P2-201ENST00000454299 GGCXP38435 758 aa12.58□□□□□ -0.4
RAB28P2-201ENST00000454299 FUT2Q10981 343 aa12.58□□□□□ -0.4
RAB28P2-201ENST00000454299 ZC3H15Q8WU90 426 aaKnown RBP12.58□□□□□ -0.4
RAB28P2-201ENST00000454299 GCGRP47871 477 aa12.57□□□□□ -0.4
RAB28P2-201ENST00000454299 SCUBE3Q8IX30 993 aa12.57□□□□□ -0.4
RAB28P2-201ENST00000454299 IRX2Q9BZI1 471 aaPredicted RBP12.57□□□□□ -0.4
RAB28P2-201ENST00000454299 PRKD2Q9BZL6 878 aa12.57□□□□□ -0.4
RAB28P2-201ENST00000454299 S1PR4O95977 384 aa12.54□□□□□ -0.4
RAB28P2-201ENST00000454299 ZMYND10O75800 440 aa12.53□□□□□ -0.4
RAB28P2-201ENST00000454299 BARGINQ6ZT62 677 aa12.53□□□□□ -0.4
RAB28P2-201ENST00000454299 PPEF1O14829 653 aaPredicted RBP12.52□□□□□ -0.41
RAB28P2-201ENST00000454299 ADH1BP00325 375 aa12.52□□□□□ -0.41
RAB28P2-201ENST00000454299 ATP6V1AP38606 617 aa12.52□□□□□ -0.41
RAB28P2-201ENST00000454299 MORN1Q5T089 497 aa12.52□□□□□ -0.41
RAB28P2-201ENST00000454299 RNF223E7ERA6 249 aa12.51□□□□□ -0.41
RAB28P2-201ENST00000454299 CD46P15529 392 aa12.51□□□□□ -0.41
RAB28P2-201ENST00000454299 GPCPD1Q9NPB8 672 aa12.51□□□□□ -0.41
RAB28P2-201ENST00000454299 CLCN1P35523 988 aa12.5□□□□□ -0.41
RAB28P2-201ENST00000454299 SPSB2Q99619 263 aa12.5□□□□□ -0.41
RAB28P2-201ENST00000454299 TMUB1Q9BVT8 246 aa12.5□□□□□ -0.41
RAB28P2-201ENST00000454299 SLC27A5Q9Y2P5 690 aa12.5□□□□□ -0.41
RAB28P2-201ENST00000454299 SLC6A16Q9GZN6 736 aa12.49□□□□□ -0.41
RAB28P2-201ENST00000454299 SLC24A1O60721 1099 aa12.46□□□□□ -0.41
RAB28P2-201ENST00000454299 TTLL12Q14166 644 aaPredicted RBP12.46□□□□□ -0.41
RAB28P2-201ENST00000454299 REPIN1Q9BWE0 567 aaKnown RBP12.46□□□□□ -0.41
RAB28P2-201ENST00000454299 FAM217BQ9NTX9 383 aaPredicted RBP12.46□□□□□ -0.41
RAB28P2-201ENST00000454299 KDM4AO75164 1064 aa12.45□□□□□ -0.42
RAB28P2-201ENST00000454299 GRIPAP1Q4V328 841 aa12.45□□□□□ -0.42
RAB28P2-201ENST00000454299 V9GY48 417 aaPredicted RBP12.45□□□□□ -0.42
RAB28P2-201ENST00000454299 FMNL1O95466 1100 aaPredicted RBP12.44□□□□□ -0.42
RAB28P2-201ENST00000454299 HLA-CQ95604 372 aa12.43□□□□□ -0.42
RAB28P2-201ENST00000454299 RNF19BQ6ZMZ0 732 aa12.42□□□□□ -0.42
RAB28P2-201ENST00000454299 ANKLE1Q8NAG6 615 aa12.42□□□□□ -0.42
RAB28P2-201ENST00000454299 THAP11Q96EK4 314 aa12.42□□□□□ -0.42
RAB28P2-201ENST00000454299 SLC19A1P41440 591 aa12.41□□□□□ -0.42
RAB28P2-201ENST00000454299 GFRA3O60609 400 aa12.4□□□□□ -0.42
RAB28P2-201ENST00000454299 PRDM9Q9NQV7 894 aa12.4□□□□□ -0.42
RAB28P2-201ENST00000454299 SSTR3P32745 418 aaPredicted RBP12.39□□□□□ -0.43
RAB28P2-201ENST00000454299 BRICD5Q6PL45 260 aa12.39□□□□□ -0.43
RAB28P2-201ENST00000454299 NUTM1Q86Y26 1132 aa12.39□□□□□ -0.43
RAB28P2-201ENST00000454299 FAM160A2Q8N612 972 aaPredicted RBP12.39□□□□□ -0.43
RAB28P2-201ENST00000454299 EMID1Q96A84 441 aaPredicted RBP12.39□□□□□ -0.43
RAB28P2-201ENST00000454299 GUCA2AQ02747 115 aa12.38□□□□□ -0.43
RAB28P2-201ENST00000454299 HOXA2O43364 376 aa12.37□□□□□ -0.43
RAB28P2-201ENST00000454299 USP46P62068 366 aa12.37□□□□□ -0.43
RAB28P2-201ENST00000454299 AMHR2Q16671 573 aa12.37□□□□□ -0.43
RAB28P2-201ENST00000454299 PLA2G2CQ5R387 149 aa12.37□□□□□ -0.43
RAB28P2-201ENST00000454299 GIGYF2Q6Y7W6 1299 aaKnown RBP12.37□□□□□ -0.43
RAB28P2-201ENST00000454299 Q6ZNB5 142 aa12.37□□□□□ -0.43
RAB28P2-201ENST00000454299 Q3C1V9 767 aa12.36□□□□□ -0.43
RAB28P2-201ENST00000454299 LIAT1Q6ZQX7 453 aa12.36□□□□□ -0.43
RAB28P2-201ENST00000454299 AK7Q96M32 723 aa12.36□□□□□ -0.43
RAB28P2-201ENST00000454299 TRIM66O15016 1216 aa12.35□□□□□ -0.43
RAB28P2-201ENST00000454299 FCF1Q9Y324 198 aaKnown RBP12.35□□□□□ -0.43
RAB28P2-201ENST00000454299 SALL2Q9Y467 1007 aaPredicted RBP12.35□□□□□ -0.43
RAB28P2-201ENST00000454299 PDZRN3Q9UPQ7 1066 aa12.34□□□□□ -0.43
RAB28P2-201ENST00000454299 SPRYD7Q5W111 196 aa12.33□□□□□ -0.44
RAB28P2-201ENST00000454299 SLC24A3Q9HC58 644 aa12.33□□□□□ -0.44
RAB28P2-201ENST00000454299 PARP9Q8IXQ6 854 aa12.32□□□□□ -0.44
RAB28P2-201ENST00000454299 BCANQ96GW7 911 aa12.32□□□□□ -0.44
RAB28P2-201ENST00000454299 MSS51Q4VC12 460 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms