RNA–Protein interactions for RNA: ENST00000448732.1

R3HDM2-208, Transcript of R3H domain containing 2, humanhuman

TSL 1 (best)

Gene R3HDM2, Length 195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-208ENST00000448732 E9PCH4 1651 aa35.56■■■■□ 3.28
R3HDM2-208ENST00000448732 IQGAP3Q86VI3 1631 aa35.56■■■■□ 3.28
R3HDM2-208ENST00000448732 MYO5BQ9ULV0 1848 aa35.55■■■■□ 3.28
R3HDM2-208ENST00000448732 NUP155O75694 1391 aa35.54■■■■□ 3.28
R3HDM2-208ENST00000448732 BCANQ96GW7 911 aa35.54■■■■□ 3.28
R3HDM2-208ENST00000448732 MED1Q15648 1581 aaPredicted RBP35.54■■■■□ 3.28
R3HDM2-208ENST00000448732 TMEM94Q12767 1356 aa35.53■■■■□ 3.28
R3HDM2-208ENST00000448732 RIMS2Q9UQ26 1411 aa35.53■■■■□ 3.28
R3HDM2-208ENST00000448732 PLEKHG1Q9ULL1 1385 aa35.52■■■■□ 3.28
R3HDM2-208ENST00000448732 PROSER2Q86WR7 435 aaPredicted RBP35.52■■■■□ 3.28
R3HDM2-208ENST00000448732 PPP1R15AO75807 674 aaPredicted RBP35.48■■■■□ 3.27
R3HDM2-208ENST00000448732 CHGAP10645 457 aaKnown RBP35.48■■■■□ 3.27
R3HDM2-208ENST00000448732 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.48■■■■□ 3.27
R3HDM2-208ENST00000448732 SENP3Q9H4L4 574 aaPredicted RBP35.47■■■■□ 3.27
R3HDM2-208ENST00000448732 NWD1Q149M9 1564 aa35.47■■■■□ 3.27
R3HDM2-208ENST00000448732 NKTRP30414 1462 aaKnown RBP35.46■■■■□ 3.27
R3HDM2-208ENST00000448732 FAM135BQ49AJ0 1406 aa35.45■■■■□ 3.27
R3HDM2-208ENST00000448732 RBM33Q96EV2 1170 aaKnown RBP35.44■■■■□ 3.26
R3HDM2-208ENST00000448732 TBX22Q9Y458 520 aa35.44■■■■□ 3.26
R3HDM2-208ENST00000448732 CHD2O14647 1828 aaKnown RBP35.39■■■■□ 3.26
R3HDM2-208ENST00000448732 RRBP1Q9P2E9 1410 aaKnown RBP35.39■■■■□ 3.26
R3HDM2-208ENST00000448732 NUTM2DQ5VT03 806 aaPredicted RBP35.35■■■■□ 3.25
R3HDM2-208ENST00000448732 ADAMTS13Q76LX8 1427 aa35.33■■■■□ 3.25
R3HDM2-208ENST00000448732 MSH6P52701 1360 aa35.33■■■■□ 3.25
R3HDM2-208ENST00000448732 PHF23Q9BUL5 403 aaPredicted RBP35.31■■■■□ 3.24
R3HDM2-208ENST00000448732 PIK3R4Q99570 1358 aa35.28■■■■□ 3.24
R3HDM2-208ENST00000448732 DIP2AQ14689 1571 aa35.28■■■■□ 3.24
R3HDM2-208ENST00000448732 NCOA3Q9Y6Q9 1424 aa35.27■■■■□ 3.24
R3HDM2-208ENST00000448732 SLAIN2Q9P270 581 aa35.27■■■■□ 3.24
R3HDM2-208ENST00000448732 ROBO1Q9Y6N7 1651 aa35.27■■■■□ 3.24
R3HDM2-208ENST00000448732 SPHKAPQ2M3C7 1700 aa35.26■■■■□ 3.23
R3HDM2-208ENST00000448732 NAIPQ13075 1403 aa35.25■■■■□ 3.23
R3HDM2-208ENST00000448732 TRPM2O94759 1503 aa35.17■■■■□ 3.22
R3HDM2-208ENST00000448732 ZNF326Q5BKZ1 582 aaKnown RBP35.16■■■■□ 3.22
R3HDM2-208ENST00000448732 AMOTL2Q9Y2J4 779 aa35.16■■■■□ 3.22
R3HDM2-208ENST00000448732 C14orf37Q86TY3 774 aa35.14■■■■□ 3.22
R3HDM2-208ENST00000448732 C19orf44Q9H6X5 657 aa35.14■■■■□ 3.22
R3HDM2-208ENST00000448732 PTPRUQ92729 1446 aa35.14■■■■□ 3.22
R3HDM2-208ENST00000448732 RGS17Q9UGC6 210 aaPredicted RBP35.12■■■■□ 3.21
R3HDM2-208ENST00000448732 HFM1A2PYH4 1435 aa35.12■■■■□ 3.21
R3HDM2-208ENST00000448732 CADPS2Q86UW7 1296 aa35.11■■■■□ 3.21
R3HDM2-208ENST00000448732 SETBP1Q9Y6X0 1596 aa35.11■■■■□ 3.21
R3HDM2-208ENST00000448732 CLTCL1P53675 1640 aa35.1■■■■□ 3.21
R3HDM2-208ENST00000448732 NRXN3Q9Y4C0 1643 aa35.1■■■■□ 3.21
R3HDM2-208ENST00000448732 TRIM52Q96A61 297 aa35.08■■■■□ 3.21
R3HDM2-208ENST00000448732 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.08■■■■□ 3.21
R3HDM2-208ENST00000448732 ATF3P18847 181 aa35.07■■■■□ 3.2
R3HDM2-208ENST00000448732 PHLPP1O60346 1717 aa35.06■■■■□ 3.2
R3HDM2-208ENST00000448732 NEXMIFQ5QGS0 1516 aa35.03■■■■□ 3.2
R3HDM2-208ENST00000448732 METP08581 1390 aa35.02■■■■□ 3.2
R3HDM2-208ENST00000448732 KIF1BO60333 1816 aa35.02■■■■□ 3.2
R3HDM2-208ENST00000448732 XRN1Q8IZH2 1706 aaKnown RBP35.01■■■■□ 3.19
R3HDM2-208ENST00000448732 JCADQ9P266 1359 aa35■■■■□ 3.19
R3HDM2-208ENST00000448732 SLC4A1APQ9BWU0 796 aaKnown RBP34.99■■■■□ 3.19
R3HDM2-208ENST00000448732 COL16A1Q07092 1604 aaPredicted RBP34.95■■■■□ 3.19
R3HDM2-208ENST00000448732 DCCP43146 1447 aa34.95■■■■□ 3.19
R3HDM2-208ENST00000448732 VGFO15240 615 aaPredicted RBP34.93■■■■□ 3.18
R3HDM2-208ENST00000448732 RPGRIP1LQ68CZ1 1315 aa34.91■■■■□ 3.18
R3HDM2-208ENST00000448732 AHDC1Q5TGY3 1603 aaPredicted RBP34.91■■■■□ 3.18
R3HDM2-208ENST00000448732 POTEAQ6S8J7 498 aa34.9■■■■□ 3.18
R3HDM2-208ENST00000448732 BRINP3Q76B58 766 aa34.9■■■■□ 3.18
R3HDM2-208ENST00000448732 SPATA31A6Q5VVP1 1343 aa34.85■■■■□ 3.17
R3HDM2-208ENST00000448732 MST1RQ04912 1400 aa34.83■■■■□ 3.17
R3HDM2-208ENST00000448732 ADGRL3Q9HAR2 1447 aa34.81■■■■□ 3.16
R3HDM2-208ENST00000448732 FOXD1Q16676 465 aa34.81■■■■□ 3.16
R3HDM2-208ENST00000448732 SETD1AO15047 1707 aaKnown RBP34.78■■■■□ 3.16
R3HDM2-208ENST00000448732 ASXL1Q8IXJ9 1541 aa34.78■■■■□ 3.16
R3HDM2-208ENST00000448732 PPLO60437 1756 aa34.77■■■■□ 3.16
R3HDM2-208ENST00000448732 SHPRHQ149N8 1683 aa34.76■■■■□ 3.16
R3HDM2-208ENST00000448732 MPHOSPH9Q99550 1183 aa34.76■■■■□ 3.16
R3HDM2-208ENST00000448732 PTCH1Q13635 1447 aa34.75■■■■□ 3.15
R3HDM2-208ENST00000448732 LRP6O75581 1613 aa34.75■■■■□ 3.15
R3HDM2-208ENST00000448732 NALCNQ8IZF0 1738 aa34.74■■■■□ 3.15
R3HDM2-208ENST00000448732 PRAG1Q86YV5 1406 aa34.72■■■■□ 3.15
R3HDM2-208ENST00000448732 ROBO2Q9HCK4 1378 aa34.72■■■■□ 3.15
R3HDM2-208ENST00000448732 SETD5Q9C0A6 1442 aa34.72■■■■□ 3.15
R3HDM2-208ENST00000448732 CCDC144AA2RUR9 1427 aa34.71■■■■□ 3.15
R3HDM2-208ENST00000448732 MEX3CQ5U5Q3 659 aaKnown RBP34.7■■■■□ 3.15
R3HDM2-208ENST00000448732 NHSL1Q5SYE7 1610 aa34.7■■■■□ 3.14
R3HDM2-208ENST00000448732 LRRC59Q96AG4 307 aaKnown RBP34.68■■■■□ 3.14
R3HDM2-208ENST00000448732 ACIN1Q9UKV3 1341 aaKnown RBP34.67■■■■□ 3.14
R3HDM2-208ENST00000448732 SPATA31E1Q6ZUB1 1445 aa34.66■■■■□ 3.14
R3HDM2-208ENST00000448732 C1orf167Q5SNV9 1468 aa34.65■■■■□ 3.14
R3HDM2-208ENST00000448732 ADGRF5Q8IZF2 1346 aa34.65■■■■□ 3.14
R3HDM2-208ENST00000448732 RGL3Q3MIN7 710 aa34.65■■■■□ 3.14
R3HDM2-208ENST00000448732 ZNF772Q68DY9 489 aaPredicted RBP34.64■■■■□ 3.14
R3HDM2-208ENST00000448732 DDX17Q92841 729 aaKnown RBP34.63■■■■□ 3.13
R3HDM2-208ENST00000448732 ANKRD30BQ9BXX2 1392 aa34.62■■■■□ 3.13
R3HDM2-208ENST00000448732 NUTM2BA6NNL0 878 aaPredicted RBP34.61■■■■□ 3.13
R3HDM2-208ENST00000448732 NUTM2EB1AL46 878 aaPredicted RBP34.61■■■■□ 3.13
R3HDM2-208ENST00000448732 NUTM2AQ8IVF1 878 aaPredicted RBP34.61■■■■□ 3.13
R3HDM2-208ENST00000448732 ORAI2Q96SN7 254 aa34.56■■■■□ 3.12
R3HDM2-208ENST00000448732 IFT172Q9UG01 1749 aa34.55■■■■□ 3.12
R3HDM2-208ENST00000448732 PNPLA6Q8IY17 1366 aa34.54■■■■□ 3.12
R3HDM2-208ENST00000448732 LAMC1P11047 1609 aa34.54■■■■□ 3.12
R3HDM2-208ENST00000448732 SOS2Q07890 1332 aaPredicted RBP34.51■■■■□ 3.11
R3HDM2-208ENST00000448732 LRPPRCP42704 1394 aaKnown RBP34.49■■■■□ 3.11
R3HDM2-208ENST00000448732 TECPR2O15040 1411 aa34.49■■■■□ 3.11
R3HDM2-208ENST00000448732 STK26Q9P289 416 aa34.49■■■■□ 3.11
R3HDM2-208ENST00000448732 PIK3C2GO75747 1445 aa34.48■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms