RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 FAM163AQ96GL9 167 aaPredicted RBP8.78□□□□□ -1
HMGB1P16-201ENST00000447155 AXIN2Q9Y2T1 843 aa8.78□□□□□ -1
HMGB1P16-201ENST00000447155 MYSM1Q5VVJ2 828 aa8.77□□□□□ -1.01
HMGB1P16-201ENST00000447155 TBC1D2Q9BYX2 928 aa8.77□□□□□ -1.01
HMGB1P16-201ENST00000447155 VPS9D1Q9Y2B5 631 aa8.76□□□□□ -1.01
HMGB1P16-201ENST00000447155 RSPH4AQ5TD94 716 aa8.75□□□□□ -1.01
HMGB1P16-201ENST00000447155 POLR3EQ9NVU0 708 aa8.75□□□□□ -1.01
HMGB1P16-201ENST00000447155 CLK2P49760 499 aaKnown RBP8.74□□□□□ -1.01
HMGB1P16-201ENST00000447155 FAM98CQ17RN3 349 aaKnown RBP8.74□□□□□ -1.01
HMGB1P16-201ENST00000447155 NUTM1Q86Y26 1132 aa8.74□□□□□ -1.01
HMGB1P16-201ENST00000447155 RDH13Q8NBN7 331 aa8.74□□□□□ -1.01
HMGB1P16-201ENST00000447155 SPIRE2Q8WWL2 714 aa8.74□□□□□ -1.01
HMGB1P16-201ENST00000447155 HS3ST6Q96QI5 342 aa8.74□□□□□ -1.01
HMGB1P16-201ENST00000447155 SEPT9Q9UHD8 586 aaPredicted RBP8.74□□□□□ -1.01
HMGB1P16-201ENST00000447155 TK2O00142 265 aa8.73□□□□□ -1.01
HMGB1P16-201ENST00000447155 FLIIQ13045 1269 aa8.73□□□□□ -1.01
HMGB1P16-201ENST00000447155 LAPTM4BQ86VI4 370 aa8.73□□□□□ -1.01
HMGB1P16-201ENST00000447155 PROCA1Q8NCQ7 364 aaPredicted RBP8.73□□□□□ -1.01
HMGB1P16-201ENST00000447155 ATP1B4Q9UN42 357 aaPredicted RBP8.73□□□□□ -1.01
HMGB1P16-201ENST00000447155 HDGFP51858 240 aaKnown RBP8.72□□□□□ -1.01
HMGB1P16-201ENST00000447155 SWT1Q5T5J6 900 aaKnown RBP8.72□□□□□ -1.01
HMGB1P16-201ENST00000447155 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.72□□□□□ -1.01
HMGB1P16-201ENST00000447155 NBPF3Q9H094 633 aa8.72□□□□□ -1.01
HMGB1P16-201ENST00000447155 POTEB3A0JP26 581 aa8.71□□□□□ -1.02
HMGB1P16-201ENST00000447155 SLC4A3P48751 1232 aa8.71□□□□□ -1.02
HMGB1P16-201ENST00000447155 POTEBQ6S5H4 581 aa8.71□□□□□ -1.02
HMGB1P16-201ENST00000447155 BHMG1C9JSJ3 638 aaPredicted RBP8.7□□□□□ -1.02
HMGB1P16-201ENST00000447155 TUSC1Q2TAM9 212 aa8.7□□□□□ -1.02
HMGB1P16-201ENST00000447155 RIC3Q7Z5B4 369 aa8.7□□□□□ -1.02
HMGB1P16-201ENST00000447155 SPTLC1O15269 473 aa8.69□□□□□ -1.02
HMGB1P16-201ENST00000447155 GJA5P36382 358 aa8.69□□□□□ -1.02
HMGB1P16-201ENST00000447155 USP46P62068 366 aa8.69□□□□□ -1.02
HMGB1P16-201ENST00000447155 LIMD1Q9UGP4 676 aa8.69□□□□□ -1.02
HMGB1P16-201ENST00000447155 KDM4AO75164 1064 aa8.68□□□□□ -1.02
HMGB1P16-201ENST00000447155 SLC10A3P09131 477 aa8.68□□□□□ -1.02
HMGB1P16-201ENST00000447155 GCGRP47871 477 aa8.68□□□□□ -1.02
HMGB1P16-201ENST00000447155 LSM11P83369 360 aaKnown RBP eCLIP8.68□□□□□ -1.02
HMGB1P16-201ENST00000447155 LCE2DQ5TA82 110 aaPredicted RBP8.68□□□□□ -1.02
HMGB1P16-201ENST00000447155 RSBN1LQ6PCB5 846 aaPredicted RBP8.68□□□□□ -1.02
HMGB1P16-201ENST00000447155 SLF2Q8IX21 1173 aa8.68□□□□□ -1.02
HMGB1P16-201ENST00000447155 ZMYND15Q9H091 742 aa8.68□□□□□ -1.02
HMGB1P16-201ENST00000447155 MOXD2PA6NHM9 499 aa8.67□□□□□ -1.02
HMGB1P16-201ENST00000447155 SAMD7Q7Z3H4 446 aa8.67□□□□□ -1.02
HMGB1P16-201ENST00000447155 ADGRD1Q6QNK2 874 aa8.66□□□□□ -1.02
HMGB1P16-201ENST00000447155 MRPL50Q8N5N7 158 aaKnown RBP8.66□□□□□ -1.02
HMGB1P16-201ENST00000447155 PPP2R2DQ66LE6 453 aa8.65□□□□□ -1.02
HMGB1P16-201ENST00000447155 ZFRQ96KR1 1074 aaKnown RBP8.65□□□□□ -1.02
HMGB1P16-201ENST00000447155 NDUFV2P19404 249 aa8.64□□□□□ -1.03
HMGB1P16-201ENST00000447155 HOXA2O43364 376 aa8.63□□□□□ -1.03
HMGB1P16-201ENST00000447155 HRO43593 1189 aa8.63□□□□□ -1.03
HMGB1P16-201ENST00000447155 RFC5P40937 340 aa8.63□□□□□ -1.03
HMGB1P16-201ENST00000447155 MCM6Q14566 821 aa8.63□□□□□ -1.03
HMGB1P16-201ENST00000447155 TMEM259Q4ZIN3 620 aa8.62□□□□□ -1.03
HMGB1P16-201ENST00000447155 BANK1Q8NDB2 785 aa8.62□□□□□ -1.03
HMGB1P16-201ENST00000447155 NECTIN2Q92692 538 aa8.62□□□□□ -1.03
HMGB1P16-201ENST00000447155 LILRB3O75022 631 aa8.61□□□□□ -1.03
HMGB1P16-201ENST00000447155 RNF40O75150 1001 aa8.61□□□□□ -1.03
HMGB1P16-201ENST00000447155 CFHP08603 1231 aa8.61□□□□□ -1.03
HMGB1P16-201ENST00000447155 CSPP1Q1MSJ5 1256 aa8.61□□□□□ -1.03
HMGB1P16-201ENST00000447155 GRIPAP1Q4V328 841 aa8.61□□□□□ -1.03
HMGB1P16-201ENST00000447155 PRPF38BQ5VTL8 546 aaKnown RBP8.61□□□□□ -1.03
HMGB1P16-201ENST00000447155 LRCH3Q96II8 777 aa8.61□□□□□ -1.03
HMGB1P16-201ENST00000447155 STAC3Q96MF2 364 aa8.61□□□□□ -1.03
HMGB1P16-201ENST00000447155 PCDHB15Q9Y5E8 787 aa8.61□□□□□ -1.03
HMGB1P16-201ENST00000447155 SPDYE5A6NIY4 337 aa8.6□□□□□ -1.03
HMGB1P16-201ENST00000447155 SUPT5HO00267 1087 aaKnown RBP8.6□□□□□ -1.03
HMGB1P16-201ENST00000447155 FDX1P10109 184 aa8.6□□□□□ -1.03
HMGB1P16-201ENST00000447155 QPCTQ16769 361 aa8.6□□□□□ -1.03
HMGB1P16-201ENST00000447155 FBXO31Q5XUX0 539 aaPredicted RBP8.6□□□□□ -1.03
HMGB1P16-201ENST00000447155 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.6□□□□□ -1.03
HMGB1P16-201ENST00000447155 UBTFP17480 764 aaKnown RBP8.59□□□□□ -1.03
HMGB1P16-201ENST00000447155 KMT5BQ4FZB7 885 aa8.59□□□□□ -1.03
HMGB1P16-201ENST00000447155 ANKRD13DQ6ZTN6 518 aa8.59□□□□□ -1.03
HMGB1P16-201ENST00000447155 ZBTB3Q9H5J0 574 aa8.59□□□□□ -1.03
HMGB1P16-201ENST00000447155 GOLGA8CPA6NN73 597 aa8.58□□□□□ -1.04
HMGB1P16-201ENST00000447155 NUTM2BA6NNL0 878 aaPredicted RBP8.58□□□□□ -1.04
HMGB1P16-201ENST00000447155 NUTM2EB1AL46 878 aaPredicted RBP8.58□□□□□ -1.04
HMGB1P16-201ENST00000447155 FUT2Q10981 343 aa8.58□□□□□ -1.04
HMGB1P16-201ENST00000447155 NUTM2DQ5VT03 806 aaPredicted RBP8.58□□□□□ -1.04
HMGB1P16-201ENST00000447155 NUTM2AQ8IVF1 878 aaPredicted RBP8.58□□□□□ -1.04
HMGB1P16-201ENST00000447155 ANKK1Q8NFD2 765 aa8.58□□□□□ -1.04
HMGB1P16-201ENST00000447155 A6NJR5 290 aa8.57□□□□□ -1.04
HMGB1P16-201ENST00000447155 HRCP23327 699 aa8.57□□□□□ -1.04
HMGB1P16-201ENST00000447155 ATP6V1AP38606 617 aa8.57□□□□□ -1.04
HMGB1P16-201ENST00000447155 RTL5Q5HYW3 569 aaPredicted RBP8.57□□□□□ -1.04
HMGB1P16-201ENST00000447155 CABLES1Q8TDN4 633 aa8.57□□□□□ -1.04
HMGB1P16-201ENST00000447155 PCDHGC3Q9UN70 934 aa8.57□□□□□ -1.04
HMGB1P16-201ENST00000447155 GUCA2AQ02747 115 aa8.56□□□□□ -1.04
HMGB1P16-201ENST00000447155 HLA-CQ95604 372 aa8.56□□□□□ -1.04
HMGB1P16-201ENST00000447155 PRR14Q9BWN1 585 aa8.56□□□□□ -1.04
HMGB1P16-201ENST00000447155 SOWAHBA6NEL2 793 aa8.55□□□□□ -1.04
HMGB1P16-201ENST00000447155 ACTN4O43707 911 aaKnown RBP8.55□□□□□ -1.04
HMGB1P16-201ENST00000447155 SNRKQ9NRH2 765 aa8.55□□□□□ -1.04
HMGB1P16-201ENST00000447155 SOCS7O14512 581 aa8.54□□□□□ -1.04
HMGB1P16-201ENST00000447155 AP1G2O75843 785 aa8.54□□□□□ -1.04
HMGB1P16-201ENST00000447155 MTMR2Q13614 643 aa8.54□□□□□ -1.04
HMGB1P16-201ENST00000447155 CLUAP1Q96AJ1 413 aa8.54□□□□□ -1.04
HMGB1P16-201ENST00000447155 RAD21O60216 631 aa8.53□□□□□ -1.04
HMGB1P16-201ENST00000447155 PPP4CP60510 307 aa8.53□□□□□ -1.04
HMGB1P16-201ENST00000447155 WNT2BQ93097 391 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms