RNA–Protein interactions for RNA: ENST00000440652.5

UBE2D4-203, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 1,299 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-203ENST00000440652 MAGI2Q86UL8 1455 aa11.14□□□□□ -0.63
UBE2D4-203ENST00000440652 PLEKHD1A6NEE1 506 aa11.14□□□□□ -0.63
UBE2D4-203ENST00000440652 ZNF710Q8N1W2 664 aa11.13□□□□□ -0.63
UBE2D4-203ENST00000440652 ZSWIM6Q9HCJ5 1215 aa11.13□□□□□ -0.63
UBE2D4-203ENST00000440652 KIF14Q15058 1648 aa11.13□□□□□ -0.63
UBE2D4-203ENST00000440652 MYO5CQ9NQX4 1742 aa11.12□□□□□ -0.63
UBE2D4-203ENST00000440652 UHRF1BP1Q6BDS2 1440 aa11.12□□□□□ -0.63
UBE2D4-203ENST00000440652 ATP10AO60312 1499 aa11.12□□□□□ -0.63
UBE2D4-203ENST00000440652 RIMBP2O15034 1052 aa11.11□□□□□ -0.63
UBE2D4-203ENST00000440652 GPR153Q6NV75 609 aa11.11□□□□□ -0.63
UBE2D4-203ENST00000440652 DIP2CQ9Y2E4 1556 aa11.11□□□□□ -0.63
UBE2D4-203ENST00000440652 C3P01024 1663 aa11.11□□□□□ -0.63
UBE2D4-203ENST00000440652 ABCA6Q8N139 1617 aa11.1□□□□□ -0.63
UBE2D4-203ENST00000440652 PLSCR2Q9NRY7 297 aa11.1□□□□□ -0.63
UBE2D4-203ENST00000440652 PLCH2O75038 1416 aa11.09□□□□□ -0.63
UBE2D4-203ENST00000440652 HS3ST6Q96QI5 342 aa11.09□□□□□ -0.63
UBE2D4-203ENST00000440652 KDM5CP41229 1560 aa11.08□□□□□ -0.64
UBE2D4-203ENST00000440652 FAM205CA6NFA0 338 aa11.08□□□□□ -0.64
UBE2D4-203ENST00000440652 GTPBP6O43824 516 aaPredicted RBP11.08□□□□□ -0.64
UBE2D4-203ENST00000440652 RYDENQ9NUL5 291 aaKnown RBP11.08□□□□□ -0.64
UBE2D4-203ENST00000440652 LTBP4Q8N2S1 1624 aa11.08□□□□□ -0.64
UBE2D4-203ENST00000440652 ARHGAP5Q13017 1502 aa11.08□□□□□ -0.64
UBE2D4-203ENST00000440652 TMC2Q8TDI7 906 aa11.07□□□□□ -0.64
UBE2D4-203ENST00000440652 ZNF518AQ6AHZ1 1483 aa11.06□□□□□ -0.64
UBE2D4-203ENST00000440652 SLC34A2O95436 690 aa11.05□□□□□ -0.64
UBE2D4-203ENST00000440652 MYT1LQ9UL68 1186 aa11.05□□□□□ -0.64
UBE2D4-203ENST00000440652 ATP1B4Q9UN42 357 aaPredicted RBP11.05□□□□□ -0.64
UBE2D4-203ENST00000440652 AFAP1Q8N556 730 aa11.04□□□□□ -0.64
UBE2D4-203ENST00000440652 RTN4Q9NQC3 1192 aaKnown RBP11.04□□□□□ -0.64
UBE2D4-203ENST00000440652 PTPRTO14522 1441 aa11.03□□□□□ -0.64
UBE2D4-203ENST00000440652 ARSIQ5FYB1 569 aa11.03□□□□□ -0.64
UBE2D4-203ENST00000440652 AMER1Q5JTC6 1135 aaPredicted RBP11.03□□□□□ -0.64
UBE2D4-203ENST00000440652 LRRIQ1Q96JM4 1722 aa11.03□□□□□ -0.64
UBE2D4-203ENST00000440652 NCOA1Q15788 1441 aa11.02□□□□□ -0.64
UBE2D4-203ENST00000440652 GPHNQ9NQX3 736 aaPredicted RBP11.02□□□□□ -0.65
UBE2D4-203ENST00000440652 REREQ9P2R6 1566 aa11.02□□□□□ -0.65
UBE2D4-203ENST00000440652 CAMSAP1Q5T5Y3 1602 aa11.02□□□□□ -0.65
UBE2D4-203ENST00000440652 ABCC1P33527 1531 aa11.01□□□□□ -0.65
UBE2D4-203ENST00000440652 EFCAB2Q5VUJ9 269 aa11.01□□□□□ -0.65
UBE2D4-203ENST00000440652 KRTAP3-3Q9BYR6 98 aa11.01□□□□□ -0.65
UBE2D4-203ENST00000440652 KRTAP3-2Q9BYR7 98 aa11.01□□□□□ -0.65
UBE2D4-203ENST00000440652 ITSN2Q9NZM3 1697 aa11.01□□□□□ -0.65
UBE2D4-203ENST00000440652 CDC42BPBQ9Y5S2 1711 aa11.01□□□□□ -0.65
UBE2D4-203ENST00000440652 LOC105371045A0A1W2PR82 267 aa11□□□□□ -0.65
UBE2D4-203ENST00000440652 KHSRPQ92945 711 aaKnown RBP eCLIP11□□□□□ -0.65
UBE2D4-203ENST00000440652 TRAPPC8Q9Y2L5 1435 aa11□□□□□ -0.65
UBE2D4-203ENST00000440652 PREX2Q70Z35 1606 aa10.99□□□□□ -0.65
UBE2D4-203ENST00000440652 FOXK1P85037 733 aa10.99□□□□□ -0.65
UBE2D4-203ENST00000440652 ERBB3P21860 1342 aa10.99□□□□□ -0.65
UBE2D4-203ENST00000440652 ZNF335Q9H4Z2 1342 aaPredicted RBP10.99□□□□□ -0.65
UBE2D4-203ENST00000440652 TROQ12816 1431 aaPredicted RBP10.99□□□□□ -0.65
UBE2D4-203ENST00000440652 MYO3AQ8NEV4 1616 aa10.98□□□□□ -0.65
UBE2D4-203ENST00000440652 KIDINS220Q9ULH0 1771 aa10.98□□□□□ -0.65
UBE2D4-203ENST00000440652 CRISPLD2Q9H0B8 497 aa10.98□□□□□ -0.65
UBE2D4-203ENST00000440652 EEA1Q15075 1411 aa10.98□□□□□ -0.65
UBE2D4-203ENST00000440652 IQSEC2Q5JU85 1478 aa10.98□□□□□ -0.65
UBE2D4-203ENST00000440652 ARHGAP35Q9NRY4 1499 aa10.98□□□□□ -0.65
UBE2D4-203ENST00000440652 AGLP35573 1532 aa10.98□□□□□ -0.65
UBE2D4-203ENST00000440652 DSG2Q14126 1118 aa10.97□□□□□ -0.65
UBE2D4-203ENST00000440652 ESF1Q9H501 851 aaKnown RBP10.97□□□□□ -0.65
UBE2D4-203ENST00000440652 CLIP1P30622 1438 aa10.97□□□□□ -0.65
UBE2D4-203ENST00000440652 MLH3Q9UHC1 1453 aa10.97□□□□□ -0.65
UBE2D4-203ENST00000440652 FMN1Q68DA7 1419 aa10.96□□□□□ -0.65
UBE2D4-203ENST00000440652 UBAP1LF5GYI3 381 aa10.96□□□□□ -0.65
UBE2D4-203ENST00000440652 VARS2Q5ST30 1063 aaKnown RBP10.96□□□□□ -0.65
UBE2D4-203ENST00000440652 PLPP6Q8IY26 295 aa10.96□□□□□ -0.65
UBE2D4-203ENST00000440652 PCDHGA4Q9Y5G9 962 aa10.96□□□□□ -0.65
UBE2D4-203ENST00000440652 CLTCQ00610 1675 aaKnown RBP10.95□□□□□ -0.66
UBE2D4-203ENST00000440652 MED1Q15648 1581 aaPredicted RBP10.95□□□□□ -0.66
UBE2D4-203ENST00000440652 NCKAP5LQ9HCH0 1330 aa10.95□□□□□ -0.66
UBE2D4-203ENST00000440652 SUPT6HQ7KZ85 1726 aaKnown RBP10.95□□□□□ -0.66
UBE2D4-203ENST00000440652 MROH2AA6NES4 1674 aa10.95□□□□□ -0.66
UBE2D4-203ENST00000440652 ZNF142P52746 1687 aaPredicted RBP10.95□□□□□ -0.66
UBE2D4-203ENST00000440652 SETD1BQ9UPS6 1966 aaKnown RBP10.94□□□□□ -0.66
UBE2D4-203ENST00000440652 SPNS2Q8IVW8 549 aa10.94□□□□□ -0.66
UBE2D4-203ENST00000440652 CEP170BQ9Y4F5 1589 aaPredicted RBP10.94□□□□□ -0.66
UBE2D4-203ENST00000440652 SYCP2Q9BX26 1530 aa10.94□□□□□ -0.66
UBE2D4-203ENST00000440652 CDC42BPAQ5VT25 1732 aa10.93□□□□□ -0.66
UBE2D4-203ENST00000440652 ZNF316A6NFI3 1004 aaPredicted RBP10.93□□□□□ -0.66
UBE2D4-203ENST00000440652 PTCD2Q8WV60 388 aaKnown RBP10.93□□□□□ -0.66
UBE2D4-203ENST00000440652 SAMD9LQ8IVG5 1584 aa10.93□□□□□ -0.66
UBE2D4-203ENST00000440652 CNTLNQ9NXG0 1405 aa10.92□□□□□ -0.66
UBE2D4-203ENST00000440652 NUDT7P0C024 238 aa10.91□□□□□ -0.66
UBE2D4-203ENST00000440652 ZNF687Q8N1G0 1237 aa10.91□□□□□ -0.66
UBE2D4-203ENST00000440652 BBXQ8WY36 941 aaPredicted RBP10.91□□□□□ -0.66
UBE2D4-203ENST00000440652 CDK11AQ9UQ88 783 aaPredicted RBP10.91□□□□□ -0.66
UBE2D4-203ENST00000440652 NPATQ14207 1427 aa10.91□□□□□ -0.66
UBE2D4-203ENST00000440652 UBTFP17480 764 aaKnown RBP10.9□□□□□ -0.66
UBE2D4-203ENST00000440652 PLA2R1Q13018 1463 aa10.89□□□□□ -0.67
UBE2D4-203ENST00000440652 TCOF1Q13428 1488 aaKnown RBP10.89□□□□□ -0.67
UBE2D4-203ENST00000440652 PIP4K2BP78356 416 aa10.89□□□□□ -0.67
UBE2D4-203ENST00000440652 ZNF777Q9ULD5 760 aaPredicted RBP10.89□□□□□ -0.67
UBE2D4-203ENST00000440652 PLXNC1O60486 1568 aa10.89□□□□□ -0.67
UBE2D4-203ENST00000440652 INO80Q9ULG1 1556 aaPredicted RBP10.89□□□□□ -0.67
UBE2D4-203ENST00000440652 ZMYM3Q14202 1370 aa10.89□□□□□ -0.67
UBE2D4-203ENST00000440652 ATP7AQ04656 1500 aa10.89□□□□□ -0.67
UBE2D4-203ENST00000440652 HSPA1LP34931 641 aa10.88□□□□□ -0.67
UBE2D4-203ENST00000440652 PTPRKQ15262 1439 aa10.87□□□□□ -0.67
UBE2D4-203ENST00000440652 PDE4AP27815 886 aa10.87□□□□□ -0.67
UBE2D4-203ENST00000440652 LHX6Q9UPM6 363 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms