RNA–Protein interactions for RNA: ENST00000438446.1

FYCO1-203, Transcript of FYVE and coiled-coil domain containing 1, humanhuman

TSL 5 BASIC

Gene FYCO1, Length 1,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1-203ENST00000438446 SLC26A8Q96RN1 970 aa24.43■■□□□ 1.5
FYCO1-203ENST00000438446 FAM135BQ49AJ0 1406 aa24.43■■□□□ 1.5
FYCO1-203ENST00000438446 TMEM94Q12767 1356 aa24.42■■□□□ 1.5
FYCO1-203ENST00000438446 ROBO1Q9Y6N7 1651 aa24.39■■□□□ 1.49
FYCO1-203ENST00000438446 NKTRP30414 1462 aaKnown RBP24.38■■□□□ 1.49
FYCO1-203ENST00000438446 SENP3Q9H4L4 574 aaPredicted RBP24.38■■□□□ 1.49
FYCO1-203ENST00000438446 IQGAP3Q86VI3 1631 aa24.38■■□□□ 1.49
FYCO1-203ENST00000438446 ROCK1Q13464 1354 aa24.37■■□□□ 1.49
FYCO1-203ENST00000438446 RGS17Q9UGC6 210 aaPredicted RBP24.36■■□□□ 1.49
FYCO1-203ENST00000438446 PLEKHG1Q9ULL1 1385 aa24.36■■□□□ 1.49
FYCO1-203ENST00000438446 PROSER2Q86WR7 435 aaPredicted RBP24.35■■□□□ 1.49
FYCO1-203ENST00000438446 RBM33Q96EV2 1170 aaKnown RBP24.35■■□□□ 1.49
FYCO1-203ENST00000438446 RIMS2Q9UQ26 1411 aa24.34■■□□□ 1.49
FYCO1-203ENST00000438446 PHF23Q9BUL5 403 aaPredicted RBP24.31■■□□□ 1.48
FYCO1-203ENST00000438446 TBX22Q9Y458 520 aa24.29■■□□□ 1.48
FYCO1-203ENST00000438446 ADAMTS13Q76LX8 1427 aa24.28■■□□□ 1.48
FYCO1-203ENST00000438446 PHLPP1O60346 1717 aa24.25■■□□□ 1.47
FYCO1-203ENST00000438446 HDGFP51858 240 aaKnown RBP24.25■■□□□ 1.47
FYCO1-203ENST00000438446 MSH6P52701 1360 aa24.23■■□□□ 1.47
FYCO1-203ENST00000438446 NCOA3Q9Y6Q9 1424 aa24.23■■□□□ 1.47
FYCO1-203ENST00000438446 DIP2AQ14689 1571 aa24.23■■□□□ 1.47
FYCO1-203ENST00000438446 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.23■■□□□ 1.47
FYCO1-203ENST00000438446 SPHKAPQ2M3C7 1700 aa24.22■■□□□ 1.47
FYCO1-203ENST00000438446 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.22■■□□□ 1.47
FYCO1-203ENST00000438446 BCANQ96GW7 911 aa24.22■■□□□ 1.47
FYCO1-203ENST00000438446 SLAIN2Q9P270 581 aa24.22■■□□□ 1.47
FYCO1-203ENST00000438446 NUP155O75694 1391 aa24.2■■□□□ 1.46
FYCO1-203ENST00000438446 NRXN3Q9Y4C0 1643 aa24.2■■□□□ 1.46
FYCO1-203ENST00000438446 PIK3R4Q99570 1358 aa24.18■■□□□ 1.46
FYCO1-203ENST00000438446 COL16A1Q07092 1604 aaPredicted RBP24.18■■□□□ 1.46
FYCO1-203ENST00000438446 PPP1R15AO75807 674 aaPredicted RBP24.18■■□□□ 1.46
FYCO1-203ENST00000438446 NUTM2DQ5VT03 806 aaPredicted RBP24.18■■□□□ 1.46
FYCO1-203ENST00000438446 CHGAP10645 457 aaKnown RBP24.17■■□□□ 1.46
FYCO1-203ENST00000438446 PTPRUQ92729 1446 aa24.17■■□□□ 1.46
FYCO1-203ENST00000438446 POTEAQ6S8J7 498 aa24.15■■□□□ 1.46
FYCO1-203ENST00000438446 TRPM2O94759 1503 aa24.14■■□□□ 1.45
FYCO1-203ENST00000438446 XRN1Q8IZH2 1706 aaKnown RBP24.13■■□□□ 1.45
FYCO1-203ENST00000438446 SETBP1Q9Y6X0 1596 aa24.12■■□□□ 1.45
FYCO1-203ENST00000438446 ITGAEP38570 1179 aa24.12■■□□□ 1.45
FYCO1-203ENST00000438446 PPARGC1BQ86YN6 1023 aaKnown RBP24.12■■□□□ 1.45
FYCO1-203ENST00000438446 AHDC1Q5TGY3 1603 aaPredicted RBP24.1■■□□□ 1.45
FYCO1-203ENST00000438446 C19orf44Q9H6X5 657 aa24.1■■□□□ 1.45
FYCO1-203ENST00000438446 JCADQ9P266 1359 aa24.09■■□□□ 1.45
FYCO1-203ENST00000438446 AMOTL2Q9Y2J4 779 aa24.08■■□□□ 1.45
FYCO1-203ENST00000438446 CLTCL1P53675 1640 aa24.08■■□□□ 1.45
FYCO1-203ENST00000438446 SHPRHQ149N8 1683 aa24.07■■□□□ 1.44
FYCO1-203ENST00000438446 KIF1BO60333 1816 aa24.07■■□□□ 1.44
FYCO1-203ENST00000438446 RRBP1Q9P2E9 1410 aaKnown RBP24.06■■□□□ 1.44
FYCO1-203ENST00000438446 CADPS2Q86UW7 1296 aa24.05■■□□□ 1.44
FYCO1-203ENST00000438446 NEXMIFQ5QGS0 1516 aa24.05■■□□□ 1.44
FYCO1-203ENST00000438446 LRP6O75581 1613 aa24.03■■□□□ 1.44
FYCO1-203ENST00000438446 NAIPQ13075 1403 aa24.02■■□□□ 1.44
FYCO1-203ENST00000438446 METP08581 1390 aa24.01■■□□□ 1.43
FYCO1-203ENST00000438446 SETD1AO15047 1707 aaKnown RBP24.01■■□□□ 1.43
FYCO1-203ENST00000438446 DCCP43146 1447 aa24.01■■□□□ 1.43
FYCO1-203ENST00000438446 ATF3P18847 181 aa24■■□□□ 1.43
FYCO1-203ENST00000438446 NHSL1Q5SYE7 1610 aa23.99■■□□□ 1.43
FYCO1-203ENST00000438446 C14orf37Q86TY3 774 aa23.99■■□□□ 1.43
FYCO1-203ENST00000438446 BRINP3Q76B58 766 aa23.98■■□□□ 1.43
FYCO1-203ENST00000438446 SPATA31A6Q5VVP1 1343 aa23.98■■□□□ 1.43
FYCO1-203ENST00000438446 NALCNQ8IZF0 1738 aa23.97■■□□□ 1.43
FYCO1-203ENST00000438446 MST1RQ04912 1400 aa23.96■■□□□ 1.43
FYCO1-203ENST00000438446 ASXL1Q8IXJ9 1541 aa23.94■■□□□ 1.42
FYCO1-203ENST00000438446 ZNF326Q5BKZ1 582 aaKnown RBP23.93■■□□□ 1.42
FYCO1-203ENST00000438446 PPLO60437 1756 aa23.91■■□□□ 1.42
FYCO1-203ENST00000438446 SETD5Q9C0A6 1442 aa23.91■■□□□ 1.42
FYCO1-203ENST00000438446 ADGRL3Q9HAR2 1447 aa23.89■■□□□ 1.41
FYCO1-203ENST00000438446 LAMC1P11047 1609 aa23.88■■□□□ 1.41
FYCO1-203ENST00000438446 HFM1A2PYH4 1435 aa23.88■■□□□ 1.41
FYCO1-203ENST00000438446 PRAG1Q86YV5 1406 aa23.85■■□□□ 1.41
FYCO1-203ENST00000438446 ZNF772Q68DY9 489 aaPredicted RBP23.83■■□□□ 1.41
FYCO1-203ENST00000438446 PTCH1Q13635 1447 aa23.82■■□□□ 1.4
FYCO1-203ENST00000438446 VGFO15240 615 aaPredicted RBP23.81■■□□□ 1.4
FYCO1-203ENST00000438446 ROBO2Q9HCK4 1378 aa23.8■■□□□ 1.4
FYCO1-203ENST00000438446 DDX17Q92841 729 aaKnown RBP23.8■■□□□ 1.4
FYCO1-203ENST00000438446 C1orf167Q5SNV9 1468 aa23.8■■□□□ 1.4
FYCO1-203ENST00000438446 RPGRIP1LQ68CZ1 1315 aa23.8■■□□□ 1.4
FYCO1-203ENST00000438446 MEX3CQ5U5Q3 659 aaKnown RBP23.79■■□□□ 1.4
FYCO1-203ENST00000438446 IFT172Q9UG01 1749 aa23.79■■□□□ 1.4
FYCO1-203ENST00000438446 LRRC59Q96AG4 307 aaKnown RBP23.78■■□□□ 1.4
FYCO1-203ENST00000438446 TRIM52Q96A61 297 aa23.77■■□□□ 1.4
FYCO1-203ENST00000438446 PNPLA6Q8IY17 1366 aa23.77■■□□□ 1.4
FYCO1-203ENST00000438446 NUTM2BA6NNL0 878 aaPredicted RBP23.76■■□□□ 1.39
FYCO1-203ENST00000438446 NUTM2EB1AL46 878 aaPredicted RBP23.76■■□□□ 1.39
FYCO1-203ENST00000438446 NUTM2AQ8IVF1 878 aaPredicted RBP23.76■■□□□ 1.39
FYCO1-203ENST00000438446 SLC4A1APQ9BWU0 796 aaKnown RBP23.76■■□□□ 1.39
FYCO1-203ENST00000438446 CDK12Q9NYV4 1490 aaPredicted RBP23.75■■□□□ 1.39
FYCO1-203ENST00000438446 UPF1Q92900 1129 aaKnown RBP eCLIP23.73■■□□□ 1.39
FYCO1-203ENST00000438446 AFF2P51816 1311 aa23.73■■□□□ 1.39
FYCO1-203ENST00000438446 RXRBP28702 533 aa23.72■■□□□ 1.39
FYCO1-203ENST00000438446 SOS2Q07890 1332 aaPredicted RBP23.72■■□□□ 1.39
FYCO1-203ENST00000438446 ORAI2Q96SN7 254 aa23.71■■□□□ 1.39
FYCO1-203ENST00000438446 FOXD1Q16676 465 aa23.7■■□□□ 1.38
FYCO1-203ENST00000438446 SPATA31E1Q6ZUB1 1445 aa23.69■■□□□ 1.38
FYCO1-203ENST00000438446 COL22A1Q8NFW1 1626 aaPredicted RBP23.69■■□□□ 1.38
FYCO1-203ENST00000438446 ADGRF5Q8IZF2 1346 aa23.67■■□□□ 1.38
FYCO1-203ENST00000438446 KNDC1Q76NI1 1749 aa23.67■■□□□ 1.38
FYCO1-203ENST00000438446 CDC42BPGQ6DT37 1551 aa23.66■■□□□ 1.38
FYCO1-203ENST00000438446 MARF1Q9Y4F3 1742 aaKnown RBP23.64■■□□□ 1.38
FYCO1-203ENST00000438446 TECPR2O15040 1411 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms