RNA–Protein interactions for RNA: ENST00000435451.1

ABCA13-203, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 3

Gene ABCA13, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-203ENST00000435451 NECTIN2Q92692 538 aa10.69□□□□□ -0.7
ABCA13-203ENST00000435451 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.68□□□□□ -0.7
ABCA13-203ENST00000435451 RNF40O75150 1001 aa10.68□□□□□ -0.7
ABCA13-203ENST00000435451 SLC4A3P48751 1232 aa10.67□□□□□ -0.7
ABCA13-203ENST00000435451 APLP1P51693 650 aa10.66□□□□□ -0.7
ABCA13-203ENST00000435451 KCNC4Q03721 635 aa10.65□□□□□ -0.7
ABCA13-203ENST00000435451 TJAP1Q5JTD0 557 aa10.65□□□□□ -0.7
ABCA13-203ENST00000435451 A0A0G2JS52 829 aa10.62□□□□□ -0.71
ABCA13-203ENST00000435451 SLC10A3P09131 477 aa10.6□□□□□ -0.71
ABCA13-203ENST00000435451 MAP2K5Q13163 448 aa10.6□□□□□ -0.71
ABCA13-203ENST00000435451 LMOD2Q6P5Q4 547 aa10.6□□□□□ -0.71
ABCA13-203ENST00000435451 PHOX2BQ99453 314 aa10.6□□□□□ -0.71
ABCA13-203ENST00000435451 MTRQ99707 1265 aa10.6□□□□□ -0.71
ABCA13-203ENST00000435451 PRR14Q9BWN1 585 aa10.59□□□□□ -0.71
ABCA13-203ENST00000435451 IL21Q9HBE4 155 aa10.59□□□□□ -0.71
ABCA13-203ENST00000435451 DAXXQ9UER7 740 aaPredicted RBP10.59□□□□□ -0.71
ABCA13-203ENST00000435451 IRF6O14896 467 aa10.58□□□□□ -0.72
ABCA13-203ENST00000435451 MINK1Q8N4C8 1332 aaPredicted RBP10.58□□□□□ -0.72
ABCA13-203ENST00000435451 RGS20O76081 388 aa10.56□□□□□ -0.72
ABCA13-203ENST00000435451 ZNF516Q92618 1163 aa10.56□□□□□ -0.72
ABCA13-203ENST00000435451 ACTN4O43707 911 aaKnown RBP10.55□□□□□ -0.72
ABCA13-203ENST00000435451 NLRP7Q8WX94 980 aa10.55□□□□□ -0.72
ABCA13-203ENST00000435451 CFHP08603 1231 aa10.54□□□□□ -0.72
ABCA13-203ENST00000435451 KMT5BQ4FZB7 885 aa10.54□□□□□ -0.72
ABCA13-203ENST00000435451 RSPH4AQ5TD94 716 aa10.54□□□□□ -0.72
ABCA13-203ENST00000435451 PCDHB3Q9Y5E6 796 aa10.54□□□□□ -0.72
ABCA13-203ENST00000435451 COPS2P61201 443 aa10.52□□□□□ -0.73
ABCA13-203ENST00000435451 ZPR1O75312 459 aa10.51□□□□□ -0.73
ABCA13-203ENST00000435451 RB1CC1Q8TDY2 1594 aa10.51□□□□□ -0.73
ABCA13-203ENST00000435451 ZMYND10O75800 440 aa10.5□□□□□ -0.73
ABCA13-203ENST00000435451 BLOC1S3Q6QNY0 202 aa10.5□□□□□ -0.73
ABCA13-203ENST00000435451 BARGINQ6ZT62 677 aa10.5□□□□□ -0.73
ABCA13-203ENST00000435451 ZC3H15Q8WU90 426 aaKnown RBP10.5□□□□□ -0.73
ABCA13-203ENST00000435451 CCDC102AQ96A19 550 aa10.5□□□□□ -0.73
ABCA13-203ENST00000435451 DDX11L8A8MPP1 907 aa10.49□□□□□ -0.73
ABCA13-203ENST00000435451 SLC24A1O60721 1099 aa10.49□□□□□ -0.73
ABCA13-203ENST00000435451 SULF1Q8IWU6 871 aa10.49□□□□□ -0.73
ABCA13-203ENST00000435451 NKX2-3Q8TAU0 364 aa10.49□□□□□ -0.73
ABCA13-203ENST00000435451 RDH13Q8NBN7 331 aa10.47□□□□□ -0.73
ABCA13-203ENST00000435451 GCGRP47871 477 aa10.46□□□□□ -0.73
ABCA13-203ENST00000435451 PPP1R18Q6NYC8 613 aa10.46□□□□□ -0.73
ABCA13-203ENST00000435451 MDM2Q00987 491 aaPredicted RBP10.44□□□□□ -0.74
ABCA13-203ENST00000435451 KRI1Q8N9T8 703 aaKnown RBP10.44□□□□□ -0.74
ABCA13-203ENST00000435451 TMUB1Q9BVT8 246 aa10.44□□□□□ -0.74
ABCA13-203ENST00000435451 CD46P15529 392 aa10.43□□□□□ -0.74
ABCA13-203ENST00000435451 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.43□□□□□ -0.74
ABCA13-203ENST00000435451 NR1I2O75469 434 aa10.42□□□□□ -0.74
ABCA13-203ENST00000435451 PUS10Q3MIT2 529 aaKnown RBP10.42□□□□□ -0.74
ABCA13-203ENST00000435451 SCUBE3Q8IX30 993 aa10.42□□□□□ -0.74
ABCA13-203ENST00000435451 ATP6V1AP38606 617 aa10.41□□□□□ -0.74
ABCA13-203ENST00000435451 FUT2Q10981 343 aa10.41□□□□□ -0.74
ABCA13-203ENST00000435451 NACADO15069 1562 aa10.4□□□□□ -0.74
ABCA13-203ENST00000435451 CLCN1P35523 988 aa10.4□□□□□ -0.74
ABCA13-203ENST00000435451 MORN1Q5T089 497 aa10.4□□□□□ -0.74
ABCA13-203ENST00000435451 GPCPD1Q9NPB8 672 aa10.4□□□□□ -0.74
ABCA13-203ENST00000435451 TLL1O43897 1013 aa10.38□□□□□ -0.75
ABCA13-203ENST00000435451 GGCXP38435 758 aa10.38□□□□□ -0.75
ABCA13-203ENST00000435451 REPIN1Q9BWE0 567 aaKnown RBP10.38□□□□□ -0.75
ABCA13-203ENST00000435451 FAM217BQ9NTX9 383 aaPredicted RBP10.37□□□□□ -0.75
ABCA13-203ENST00000435451 ADH1BP00325 375 aa10.36□□□□□ -0.75
ABCA13-203ENST00000435451 AMHR2Q16671 573 aa10.36□□□□□ -0.75
ABCA13-203ENST00000435451 THAP11Q96EK4 314 aa10.35□□□□□ -0.75
ABCA13-203ENST00000435451 SLC27A5Q9Y2P5 690 aa10.35□□□□□ -0.75
ABCA13-203ENST00000435451 GRIPAP1Q4V328 841 aa10.34□□□□□ -0.75
ABCA13-203ENST00000435451 BCANQ96GW7 911 aa10.34□□□□□ -0.75
ABCA13-203ENST00000435451 SALL2Q9Y467 1007 aaPredicted RBP10.34□□□□□ -0.75
ABCA13-203ENST00000435451 RNF223E7ERA6 249 aa10.33□□□□□ -0.76
ABCA13-203ENST00000435451 KDM4AO75164 1064 aa10.33□□□□□ -0.76
ABCA13-203ENST00000435451 SPSB2Q99619 263 aa10.33□□□□□ -0.76
ABCA13-203ENST00000435451 PRKD2Q9BZL6 878 aa10.33□□□□□ -0.76
ABCA13-203ENST00000435451 V9GY48 417 aaPredicted RBP10.33□□□□□ -0.76
ABCA13-203ENST00000435451 S1PR4O95977 384 aa10.32□□□□□ -0.76
ABCA13-203ENST00000435451 AK7Q96M32 723 aa10.32□□□□□ -0.76
ABCA13-203ENST00000435451 UNC13AQ9UPW8 1703 aa10.32□□□□□ -0.76
ABCA13-203ENST00000435451 TRIM66O15016 1216 aa10.31□□□□□ -0.76
ABCA13-203ENST00000435451 SSTR3P32745 418 aaPredicted RBP10.31□□□□□ -0.76
ABCA13-203ENST00000435451 USP46P62068 366 aa10.31□□□□□ -0.76
ABCA13-203ENST00000435451 SLC6A16Q9GZN6 736 aa10.31□□□□□ -0.76
ABCA13-203ENST00000435451 FMNL1O95466 1100 aaPredicted RBP10.3□□□□□ -0.76
ABCA13-203ENST00000435451 BRICD5Q6PL45 260 aa10.3□□□□□ -0.76
ABCA13-203ENST00000435451 ANKLE1Q8NAG6 615 aa10.3□□□□□ -0.76
ABCA13-203ENST00000435451 IRX2Q9BZI1 471 aaPredicted RBP10.3□□□□□ -0.76
ABCA13-203ENST00000435451 BICRAQ9NZM4 1560 aa10.28□□□□□ -0.76
ABCA13-203ENST00000435451 PPEF1O14829 653 aaPredicted RBP10.28□□□□□ -0.76
ABCA13-203ENST00000435451 TTLL12Q14166 644 aaPredicted RBP10.28□□□□□ -0.76
ABCA13-203ENST00000435451 FAM160A2Q8N612 972 aaPredicted RBP10.28□□□□□ -0.76
ABCA13-203ENST00000435451 GIGYF2Q6Y7W6 1299 aaKnown RBP10.27□□□□□ -0.77
ABCA13-203ENST00000435451 EMID1Q96A84 441 aaPredicted RBP10.27□□□□□ -0.77
ABCA13-203ENST00000435451 HOXA2O43364 376 aa10.26□□□□□ -0.77
ABCA13-203ENST00000435451 RNF19BQ6ZMZ0 732 aa10.26□□□□□ -0.77
ABCA13-203ENST00000435451 Q3C1V9 767 aa10.25□□□□□ -0.77
ABCA13-203ENST00000435451 PARP9Q8IXQ6 854 aa10.25□□□□□ -0.77
ABCA13-203ENST00000435451 HLA-CQ95604 372 aa10.25□□□□□ -0.77
ABCA13-203ENST00000435451 SLC24A3Q9HC58 644 aa10.25□□□□□ -0.77
ABCA13-203ENST00000435451 NUTM1Q86Y26 1132 aa10.24□□□□□ -0.77
ABCA13-203ENST00000435451 MYO15BQ96JP2 1530 aa10.23□□□□□ -0.77
ABCA13-203ENST00000435451 SLC19A1P41440 591 aa10.23□□□□□ -0.77
ABCA13-203ENST00000435451 MSS51Q4VC12 460 aa10.23□□□□□ -0.77
ABCA13-203ENST00000435451 LIAT1Q6ZQX7 453 aa10.22□□□□□ -0.77
ABCA13-203ENST00000435451 SPIRE2Q8WWL2 714 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms